RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 DNM2P50570 870 aa6.2□□□□□ -1.42
GGPS1-208ENST00000497327 RCAN1P53805 252 aa6.2□□□□□ -1.42
GGPS1-208ENST00000497327 CD83Q01151 205 aa6.2□□□□□ -1.42
GGPS1-208ENST00000497327 PCOLCEQ15113 449 aa6.2□□□□□ -1.42
GGPS1-208ENST00000497327 LONRF2Q1L5Z9 754 aa6.2□□□□□ -1.42
GGPS1-208ENST00000497327 CFAP100Q494V2 611 aa6.2□□□□□ -1.42
GGPS1-208ENST00000497327 FAM47CQ5HY64 1035 aa6.2□□□□□ -1.42
GGPS1-208ENST00000497327 TMEM200BQ69YZ2 307 aa6.2□□□□□ -1.42
GGPS1-208ENST00000497327 GSTCDQ8NEC7 633 aa6.2□□□□□ -1.42
GGPS1-208ENST00000497327 DYNLL2Q96FJ2 89 aa6.2□□□□□ -1.42
GGPS1-208ENST00000497327 PRMT6Q96LA8 375 aaPredicted RBP6.2□□□□□ -1.42
GGPS1-208ENST00000497327 LLPHQ9BRT6 129 aaKnown RBP6.2□□□□□ -1.42
GGPS1-208ENST00000497327 SLITRK6Q9H5Y7 841 aa6.2□□□□□ -1.42
GGPS1-208ENST00000497327 TCP11L1Q9NUJ3 509 aa6.2□□□□□ -1.42
GGPS1-208ENST00000497327 SAP30BPQ9UHR5 308 aaKnown RBP6.2□□□□□ -1.42
GGPS1-208ENST00000497327 CDC42EP3Q9UKI2 254 aa6.2□□□□□ -1.42
GGPS1-208ENST00000497327 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.2□□□□□ -1.42
GGPS1-208ENST00000497327 NID2Q14112 1375 aa6.19□□□□□ -1.42
GGPS1-208ENST00000497327 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.19□□□□□ -1.42
GGPS1-208ENST00000497327 RASSF10A6NK89 507 aa6.19□□□□□ -1.42
GGPS1-208ENST00000497327 IFIT3O14879 490 aaKnown RBP6.19□□□□□ -1.42
GGPS1-208ENST00000497327 JAK2O60674 1132 aa6.19□□□□□ -1.42
GGPS1-208ENST00000497327 DTNBO60941 627 aa6.19□□□□□ -1.42
GGPS1-208ENST00000497327 ENTPD3O75355 529 aa6.19□□□□□ -1.42
GGPS1-208ENST00000497327 FDPSP14324 419 aaKnown RBP6.19□□□□□ -1.42
GGPS1-208ENST00000497327 RPS12P25398 132 aaKnown RBP6.19□□□□□ -1.42
GGPS1-208ENST00000497327 NUCB2P80303 420 aa6.19□□□□□ -1.42
GGPS1-208ENST00000497327 DGCR2P98153 550 aa6.19□□□□□ -1.42
GGPS1-208ENST00000497327 STK3Q13188 491 aa6.19□□□□□ -1.42
GGPS1-208ENST00000497327 SERINC3Q13530 473 aa6.19□□□□□ -1.42
GGPS1-208ENST00000497327 RASA3Q14644 834 aa6.19□□□□□ -1.42
GGPS1-208ENST00000497327 TNIP1Q15025 636 aa6.19□□□□□ -1.42
GGPS1-208ENST00000497327 RRP12Q5JTH9 1297 aaKnown RBP6.19□□□□□ -1.42
GGPS1-208ENST00000497327 FKBP1CQ5VVH2 108 aa6.19□□□□□ -1.42
GGPS1-208ENST00000497327 APOA5Q6Q788 366 aa6.19□□□□□ -1.42
GGPS1-208ENST00000497327 USP30Q70CQ3 517 aa6.19□□□□□ -1.42
GGPS1-208ENST00000497327 ZC3H7AQ8IWR0 971 aaKnown RBP6.19□□□□□ -1.42
GGPS1-208ENST00000497327 TMTC2Q8N394 836 aa6.19□□□□□ -1.42
GGPS1-208ENST00000497327 ZNF808Q8N4W9 903 aaPredicted RBP6.19□□□□□ -1.42
GGPS1-208ENST00000497327 CISD2Q8N5K1 135 aaKnown RBP6.19□□□□□ -1.42
GGPS1-208ENST00000497327 ENAHQ8N8S7 591 aaPredicted RBP6.19□□□□□ -1.42
GGPS1-208ENST00000497327 SLC44A5Q8NCS7 719 aa6.19□□□□□ -1.42
GGPS1-208ENST00000497327 NSUN7Q8NE18 718 aaKnown RBP6.19□□□□□ -1.42
GGPS1-208ENST00000497327 JDP2Q8WYK2 163 aa6.19□□□□□ -1.42
GGPS1-208ENST00000497327 DPF2Q92785 391 aa6.19□□□□□ -1.42
GGPS1-208ENST00000497327 TNPO1Q92973 898 aaKnown RBP6.19□□□□□ -1.42
GGPS1-208ENST00000497327 OR10A5Q9H207 317 aa6.19□□□□□ -1.42
GGPS1-208ENST00000497327 TDRD3Q9H7E2 651 aaKnown RBP6.19□□□□□ -1.42
GGPS1-208ENST00000497327 IL17RBQ9NRM6 502 aa6.19□□□□□ -1.42
GGPS1-208ENST00000497327 UCKL1Q9NWZ5 548 aa6.19□□□□□ -1.42
GGPS1-208ENST00000497327 SIRPGQ9P1W8 387 aa6.19□□□□□ -1.42
GGPS1-208ENST00000497327 ZNF70Q9UC06 446 aaPredicted RBP6.19□□□□□ -1.42
GGPS1-208ENST00000497327 PGAP2Q9UHJ9 254 aa6.19□□□□□ -1.42
GGPS1-208ENST00000497327 HDAC9Q9UKV0 1011 aa6.19□□□□□ -1.42
GGPS1-208ENST00000497327 SMC3Q9UQE7 1217 aa6.19□□□□□ -1.42
GGPS1-208ENST00000497327 LAMA4Q16363 1823 aa6.19□□□□□ -1.42
GGPS1-208ENST00000497327 CCDC88AQ3V6T2 1871 aa6.19□□□□□ -1.42
GGPS1-208ENST00000497327 TNKSO95271 1327 aa6.19□□□□□ -1.42
GGPS1-208ENST00000497327 DDX60LQ5H9U9 1706 aaKnown RBP6.19□□□□□ -1.42
GGPS1-208ENST00000497327 MYH2Q9UKX2 1941 aa6.19□□□□□ -1.42
GGPS1-208ENST00000497327 ATRNL1Q5VV63 1379 aa6.18□□□□□ -1.42
GGPS1-208ENST00000497327 COL2A1P02458 1487 aaPredicted RBP6.18□□□□□ -1.42
GGPS1-208ENST00000497327 IGKV6D-41A0A0C4DH26 115 aa6.18□□□□□ -1.42
GGPS1-208ENST00000497327 SHTN1A0MZ66 631 aa6.18□□□□□ -1.42
GGPS1-208ENST00000497327 DDTLA6NHG4 134 aaPredicted RBP6.18□□□□□ -1.42
GGPS1-208ENST00000497327 GOLGA8BA8MQT2 603 aa6.18□□□□□ -1.42
GGPS1-208ENST00000497327 GSTA4O15217 222 aa6.18□□□□□ -1.42
GGPS1-208ENST00000497327 NARSO43776 548 aaKnown RBP6.18□□□□□ -1.42
GGPS1-208ENST00000497327 RANBP6O60518 1105 aaKnown RBP6.18□□□□□ -1.42
GGPS1-208ENST00000497327 NMT2O60551 498 aa6.18□□□□□ -1.42
GGPS1-208ENST00000497327 SYT1P21579 422 aa6.18□□□□□ -1.42
GGPS1-208ENST00000497327 GJB2P29033 226 aa6.18□□□□□ -1.42
GGPS1-208ENST00000497327 SHMT1P34896 483 aa6.18□□□□□ -1.42
GGPS1-208ENST00000497327 GMPSP49915 693 aaPredicted RBP6.18□□□□□ -1.42
GGPS1-208ENST00000497327 CACNB3P54284 484 aa6.18□□□□□ -1.42
GGPS1-208ENST00000497327 CCT2P78371 535 aaKnown RBP6.18□□□□□ -1.42
GGPS1-208ENST00000497327 TFAP4Q01664 338 aa6.18□□□□□ -1.42
GGPS1-208ENST00000497327 HGFACQ04756 655 aa6.18□□□□□ -1.42
GGPS1-208ENST00000497327 TROAPQ12815 778 aa6.18□□□□□ -1.42
GGPS1-208ENST00000497327 FOXL1Q12952 345 aa6.18□□□□□ -1.42
GGPS1-208ENST00000497327 PICALMQ13492 652 aa6.18□□□□□ -1.42
GGPS1-208ENST00000497327 WTAPQ15007 396 aa6.18□□□□□ -1.42
GGPS1-208ENST00000497327 SART3Q15020 963 aaKnown RBP6.18□□□□□ -1.42
GGPS1-208ENST00000497327 DLGAP5Q15398 846 aa6.18□□□□□ -1.42
GGPS1-208ENST00000497327 SLC4A8Q2Y0W8 1093 aa6.18□□□□□ -1.42
GGPS1-208ENST00000497327 FAM47AQ5JRC9 791 aa6.18□□□□□ -1.42
GGPS1-208ENST00000497327 FILIP1Q7Z7B0 1213 aa6.18□□□□□ -1.42
GGPS1-208ENST00000497327 DGKHQ86XP1 1220 aa6.18□□□□□ -1.42
GGPS1-208ENST00000497327 FOXP4Q8IVH2 680 aaPredicted RBP6.18□□□□□ -1.42
GGPS1-208ENST00000497327 AMOTL1Q8IY63 956 aa6.18□□□□□ -1.42
GGPS1-208ENST00000497327 GPR135Q8IZ08 494 aa6.18□□□□□ -1.42
GGPS1-208ENST00000497327 IL17DQ8TAD2 202 aa6.18□□□□□ -1.42
GGPS1-208ENST00000497327 ASB15Q8WXK1 588 aa6.18□□□□□ -1.42
GGPS1-208ENST00000497327 CHMP4CQ96CF2 233 aa6.18□□□□□ -1.42
GGPS1-208ENST00000497327 UBAC1Q9BSL1 405 aa6.18□□□□□ -1.42
GGPS1-208ENST00000497327 DHX36Q9H2U1 1008 aaKnown RBP6.18□□□□□ -1.42
GGPS1-208ENST00000497327 C12orf65Q9H3J6 166 aaKnown RBP6.18□□□□□ -1.42
GGPS1-208ENST00000497327 DNAJC18Q9H819 358 aa6.18□□□□□ -1.42
GGPS1-208ENST00000497327 NCOA5Q9HCD5 579 aaKnown RBP6.18□□□□□ -1.42
GGPS1-208ENST00000497327 MSL2Q9HCI7 577 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms