RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 PATJQ8NI35 1801 aa18.29■□□□□ 0.52
TRAPPC3-207ENST00000497251 VWA3AA6NCI4 1184 aa18.29■□□□□ 0.52
TRAPPC3-207ENST00000497251 CNR2P34972 360 aa18.29■□□□□ 0.52
TRAPPC3-207ENST00000497251 TUFMP49411 452 aaKnown RBP18.29■□□□□ 0.52
TRAPPC3-207ENST00000497251 MCM2P49736 904 aa18.29■□□□□ 0.52
TRAPPC3-207ENST00000497251 ZNF131P52739 623 aa18.29■□□□□ 0.52
TRAPPC3-207ENST00000497251 RAD51AP2Q09MP3 1159 aa18.29■□□□□ 0.52
TRAPPC3-207ENST00000497251 FCHO2Q0JRZ9 810 aa18.29■□□□□ 0.52
TRAPPC3-207ENST00000497251 GRM2Q14416 872 aa18.29■□□□□ 0.52
TRAPPC3-207ENST00000497251 SPATA1Q5VX52 437 aa18.29■□□□□ 0.52
TRAPPC3-207ENST00000497251 OVOS1Q6IE37 1185 aa18.29■□□□□ 0.52
TRAPPC3-207ENST00000497251 CSGALNACT1Q8TDX6 532 aa18.29■□□□□ 0.52
TRAPPC3-207ENST00000497251 ZSWIM3Q96MP5 696 aa18.29■□□□□ 0.52
TRAPPC3-207ENST00000497251 SLITRK6Q9H5Y7 841 aa18.29■□□□□ 0.52
TRAPPC3-207ENST00000497251 ASB7Q9H672 318 aa18.29■□□□□ 0.52
TRAPPC3-207ENST00000497251 RAB23Q9ULC3 237 aa18.29■□□□□ 0.52
TRAPPC3-207ENST00000497251 PIAS3Q9Y6X2 628 aa18.29■□□□□ 0.52
TRAPPC3-207ENST00000497251 A0A0B4J269 797 aa18.28■□□□□ 0.52
TRAPPC3-207ENST00000497251 LACTBL1A8MY62 500 aa18.28■□□□□ 0.52
TRAPPC3-207ENST00000497251 FOXD2O60548 495 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC3-207ENST00000497251 LRP3O75074 770 aa18.28■□□□□ 0.52
TRAPPC3-207ENST00000497251 ODC1P11926 461 aa18.28■□□□□ 0.52
TRAPPC3-207ENST00000497251 LILRA4P59901 499 aa18.28■□□□□ 0.52
TRAPPC3-207ENST00000497251 LRRC32Q14392 662 aa18.28■□□□□ 0.52
TRAPPC3-207ENST00000497251 ARSHQ5FYA8 562 aa18.28■□□□□ 0.52
TRAPPC3-207ENST00000497251 SLFN12LQ6IEE8 588 aa18.28■□□□□ 0.52
TRAPPC3-207ENST00000497251 CENPPQ6IPU0 288 aa18.28■□□□□ 0.52
TRAPPC3-207ENST00000497251 HS6ST3Q8IZP7 471 aa18.28■□□□□ 0.52
TRAPPC3-207ENST00000497251 DCLK2Q8N568 766 aa18.28■□□□□ 0.52
TRAPPC3-207ENST00000497251 SHKBP1Q8TBC3 707 aa18.28■□□□□ 0.52
TRAPPC3-207ENST00000497251 C2orf15Q8WU43 125 aaKnown RBP18.28■□□□□ 0.52
TRAPPC3-207ENST00000497251 LRRC3Q9BY71 257 aa18.28■□□□□ 0.52
TRAPPC3-207ENST00000497251 LMAN1LQ9HAT1 526 aa18.28■□□□□ 0.52
TRAPPC3-207ENST00000497251 GMEB2Q9UKD1 530 aa18.28■□□□□ 0.52
TRAPPC3-207ENST00000497251 PDCD11Q14690 1871 aaKnown RBP18.28■□□□□ 0.52
TRAPPC3-207ENST00000497251 HEPACAM2A8MVW5 462 aa18.27■□□□□ 0.52
TRAPPC3-207ENST00000497251 ARNTLO00327 626 aa18.27■□□□□ 0.52
TRAPPC3-207ENST00000497251 TRAK2O60296 914 aa18.27■□□□□ 0.52
TRAPPC3-207ENST00000497251 FAM189A1O60320 539 aa18.27■□□□□ 0.52
TRAPPC3-207ENST00000497251 FAM13AO94988 1023 aa18.27■□□□□ 0.52
TRAPPC3-207ENST00000497251 PAPSS2O95340 614 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC3-207ENST00000497251 CYP11A1P05108 521 aa18.27■□□□□ 0.52
TRAPPC3-207ENST00000497251 LONP1P36776 959 aaKnown RBP18.27■□□□□ 0.52
TRAPPC3-207ENST00000497251 CXCL12P48061 93 aa18.27■□□□□ 0.52
TRAPPC3-207ENST00000497251 PLCB2Q00722 1185 aa18.27■□□□□ 0.52
TRAPPC3-207ENST00000497251 DUSP4Q13115 394 aa18.27■□□□□ 0.52
TRAPPC3-207ENST00000497251 TEAD2Q15562 447 aa18.27■□□□□ 0.52
TRAPPC3-207ENST00000497251 ENOX2Q16206 610 aaKnown RBP18.27■□□□□ 0.52
TRAPPC3-207ENST00000497251 ARHGAP29Q52LW3 1261 aa18.27■□□□□ 0.52
TRAPPC3-207ENST00000497251 SEZ6Q53EL9 994 aa18.27■□□□□ 0.52
TRAPPC3-207ENST00000497251 ARHGAP15Q53QZ3 475 aa18.27■□□□□ 0.52
TRAPPC3-207ENST00000497251 DGKKQ5KSL6 1271 aa18.27■□□□□ 0.52
TRAPPC3-207ENST00000497251 RALGPS2Q86X27 583 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC3-207ENST00000497251 SYNPOQ8N3V7 929 aa18.27■□□□□ 0.52
TRAPPC3-207ENST00000497251 SPEM1Q8N4L4 309 aa18.27■□□□□ 0.52
TRAPPC3-207ENST00000497251 MYCT1Q8N699 235 aa18.27■□□□□ 0.52
TRAPPC3-207ENST00000497251 PSMG2Q969U7 264 aa18.27■□□□□ 0.52
TRAPPC3-207ENST00000497251 HAPLN2Q9GZV7 340 aa18.27■□□□□ 0.52
TRAPPC3-207ENST00000497251 NDRG2Q9UN36 371 aaKnown RBP18.27■□□□□ 0.52
TRAPPC3-207ENST00000497251 C2CD2Q9Y426 696 aa18.27■□□□□ 0.52
TRAPPC3-207ENST00000497251 SOBPA7XYQ1 873 aa18.26■□□□□ 0.51
TRAPPC3-207ENST00000497251 DPYSL4O14531 572 aa18.26■□□□□ 0.51
TRAPPC3-207ENST00000497251 CHRNB1P11230 501 aa18.26■□□□□ 0.51
TRAPPC3-207ENST00000497251 TDGF1P13385 188 aa18.26■□□□□ 0.51
TRAPPC3-207ENST00000497251 HOXA6P31267 233 aa18.26■□□□□ 0.51
TRAPPC3-207ENST00000497251 VIPR2P41587 438 aa18.26■□□□□ 0.51
TRAPPC3-207ENST00000497251 GTF2BQ00403 316 aa18.26■□□□□ 0.51
TRAPPC3-207ENST00000497251 PTPAQ15257 358 aa18.26■□□□□ 0.51
TRAPPC3-207ENST00000497251 LAIR1Q6GTX8 287 aa18.26■□□□□ 0.51
TRAPPC3-207ENST00000497251 DNAJB7Q7Z6W7 309 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC3-207ENST00000497251 GPBP1Q86WP2 473 aa18.26■□□□□ 0.51
TRAPPC3-207ENST00000497251 NT5DC4Q86YG4 428 aa18.26■□□□□ 0.51
TRAPPC3-207ENST00000497251 TMC8Q8IU68 726 aa18.26■□□□□ 0.51
TRAPPC3-207ENST00000497251 SENP8Q96LD8 212 aa18.26■□□□□ 0.51
TRAPPC3-207ENST00000497251 REEP2Q9BRK0 252 aa18.26■□□□□ 0.51
TRAPPC3-207ENST00000497251 MSTO1Q9BUK6 570 aa18.26■□□□□ 0.51
TRAPPC3-207ENST00000497251 ST6GALNAC4Q9H4F1 302 aa18.26■□□□□ 0.51
TRAPPC3-207ENST00000497251 CPSF3Q9UKF6 684 aaKnown RBP18.26■□□□□ 0.51
TRAPPC3-207ENST00000497251 A0A1W2PRU2 124 aa18.25■□□□□ 0.51
TRAPPC3-207ENST00000497251 ANO9A1A5B4 782 aa18.25■□□□□ 0.51
TRAPPC3-207ENST00000497251 K7ENM7 598 aa18.25■□□□□ 0.51
TRAPPC3-207ENST00000497251 PIRO00625 290 aa18.25■□□□□ 0.51
TRAPPC3-207ENST00000497251 VEPH1Q14D04 833 aa18.25■□□□□ 0.51
TRAPPC3-207ENST00000497251 POSTNQ15063 836 aa18.25■□□□□ 0.51
TRAPPC3-207ENST00000497251 RSPO4Q2I0M5 234 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC3-207ENST00000497251 BRAPQ7Z569 592 aa18.25■□□□□ 0.51
TRAPPC3-207ENST00000497251 METTL23Q86XA0 190 aa18.25■□□□□ 0.51
TRAPPC3-207ENST00000497251 ARID3BQ8IVW6 561 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC3-207ENST00000497251 PLIN2Q99541 437 aa18.25■□□□□ 0.51
TRAPPC3-207ENST00000497251 CCSER1Q9C0I3 900 aa18.25■□□□□ 0.51
TRAPPC3-207ENST00000497251 DNAJC25Q9H1X3 360 aa18.25■□□□□ 0.51
TRAPPC3-207ENST00000497251 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC3-207ENST00000497251 TIMM13Q9Y5L4 95 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC3-207ENST00000497251 STYXL1Q9Y6J8 313 aa18.25■□□□□ 0.51
TRAPPC3-207ENST00000497251 DNAH14Q0VDD8 3507 aa18.24■□□□□ 0.51
TRAPPC3-207ENST00000497251 ACACBO00763 2458 aa18.24■□□□□ 0.51
TRAPPC3-207ENST00000497251 MYBPHLA2RUH7 354 aa18.24■□□□□ 0.51
TRAPPC3-207ENST00000497251 MTMR11A4FU01 709 aa18.24■□□□□ 0.51
TRAPPC3-207ENST00000497251 TBCAO75347 108 aaKnown RBP18.24■□□□□ 0.51
TRAPPC3-207ENST00000497251 VNN2O95498 520 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms