RNA–Protein interactions for RNA: ENST00000497080.1

RAB3GAP1-206, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5

Gene RAB3GAP1, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-206ENST00000497080 LRRC3CA6NJW4 275 aa5.74□□□□□ -1.49
RAB3GAP1-206ENST00000497080 NT5C1B-RDH14C9J2C7 533 aa5.74□□□□□ -1.49
RAB3GAP1-206ENST00000497080 E9PLN8 166 aa5.74□□□□□ -1.49
RAB3GAP1-206ENST00000497080 C1QL1O75973 258 aa5.74□□□□□ -1.49
RAB3GAP1-206ENST00000497080 ZRANB2O95218 330 aaKnown RBP eCLIP5.74□□□□□ -1.49
RAB3GAP1-206ENST00000497080 ANXA1P04083 346 aa5.74□□□□□ -1.49
RAB3GAP1-206ENST00000497080 HNRNPMP52272 730 aaKnown RBP eCLIP5.74□□□□□ -1.49
RAB3GAP1-206ENST00000497080 PSMC1P62191 440 aaKnown RBP5.74□□□□□ -1.49
RAB3GAP1-206ENST00000497080 COLEC12Q5KU26 742 aa5.74□□□□□ -1.49
RAB3GAP1-206ENST00000497080 TAPT1Q6NXT6 567 aa5.74□□□□□ -1.49
RAB3GAP1-206ENST00000497080 SLC4A10Q6U841 1118 aa5.74□□□□□ -1.49
RAB3GAP1-206ENST00000497080 SLC30A10Q6XR72 485 aa5.74□□□□□ -1.49
RAB3GAP1-206ENST00000497080 SNX19Q92543 992 aa5.74□□□□□ -1.49
RAB3GAP1-206ENST00000497080 VKORC1Q9BQB6 163 aa5.74□□□□□ -1.49
RAB3GAP1-206ENST00000497080 BRD9Q9H8M2 597 aa5.74□□□□□ -1.49
RAB3GAP1-206ENST00000497080 PCDH12Q9NPG4 1184 aa5.74□□□□□ -1.49
RAB3GAP1-206ENST00000497080 ASB6Q9NWX5 421 aa5.74□□□□□ -1.49
RAB3GAP1-206ENST00000497080 PCDHA3Q9Y5H8 950 aa5.74□□□□□ -1.49
RAB3GAP1-206ENST00000497080 TNFRSF18Q9Y5U5 241 aa5.74□□□□□ -1.49
RAB3GAP1-206ENST00000497080 ARHGEF17Q96PE2 2063 aaPredicted RBP5.73□□□□□ -1.49
RAB3GAP1-206ENST00000497080 PRSS29PA6NIE9 313 aa5.73□□□□□ -1.49
RAB3GAP1-206ENST00000497080 POLRMTO00411 1230 aaKnown RBP5.73□□□□□ -1.49
RAB3GAP1-206ENST00000497080 MPPED1O15442 326 aa5.73□□□□□ -1.49
RAB3GAP1-206ENST00000497080 PROM1O43490 865 aa5.73□□□□□ -1.49
RAB3GAP1-206ENST00000497080 GJB1P08034 283 aa5.73□□□□□ -1.49
RAB3GAP1-206ENST00000497080 PDCP20941 246 aa5.73□□□□□ -1.49
RAB3GAP1-206ENST00000497080 CYP2C19P33261 490 aa5.73□□□□□ -1.49
RAB3GAP1-206ENST00000497080 PHKA1P46020 1223 aa5.73□□□□□ -1.49
RAB3GAP1-206ENST00000497080 POU6F2P78424 691 aaPredicted RBP5.73□□□□□ -1.49
RAB3GAP1-206ENST00000497080 AKNAD1Q5T1N1 836 aa5.73□□□□□ -1.49
RAB3GAP1-206ENST00000497080 MICALCLQ6ZW33 695 aa5.73□□□□□ -1.49
RAB3GAP1-206ENST00000497080 TMPRSS9Q7Z410 1059 aa5.73□□□□□ -1.49
RAB3GAP1-206ENST00000497080 C3orf20Q8ND61 904 aa5.73□□□□□ -1.49
RAB3GAP1-206ENST00000497080 MYCBPAPQ8TBZ2 947 aa5.73□□□□□ -1.49
RAB3GAP1-206ENST00000497080 SCAMP4Q969E2 229 aa5.73□□□□□ -1.49
RAB3GAP1-206ENST00000497080 SMOQ99835 787 aa5.73□□□□□ -1.49
RAB3GAP1-206ENST00000497080 SLAMF7Q9NQ25 335 aa5.73□□□□□ -1.49
RAB3GAP1-206ENST00000497080 SIDT1Q9NXL6 827 aaKnown RBP5.73□□□□□ -1.49
RAB3GAP1-206ENST00000497080 SPEF1Q9Y4P9 236 aa5.73□□□□□ -1.49
RAB3GAP1-206ENST00000497080 ZNF785A8K8V0 405 aa5.72□□□□□ -1.49
RAB3GAP1-206ENST00000497080 C1RP00736 705 aa5.72□□□□□ -1.49
RAB3GAP1-206ENST00000497080 CHRM2P08172 466 aa5.72□□□□□ -1.49
RAB3GAP1-206ENST00000497080 PPP3CBP16298 524 aa5.72□□□□□ -1.49
RAB3GAP1-206ENST00000497080 LPOP22079 712 aaPredicted RBP5.72□□□□□ -1.49
RAB3GAP1-206ENST00000497080 RECQLP46063 649 aaPredicted RBP5.72□□□□□ -1.49
RAB3GAP1-206ENST00000497080 MAPK10P53779 464 aa5.72□□□□□ -1.49
RAB3GAP1-206ENST00000497080 HLXQ14774 488 aaPredicted RBP5.72□□□□□ -1.49
RAB3GAP1-206ENST00000497080 PTPRRQ15256 657 aa5.72□□□□□ -1.49
RAB3GAP1-206ENST00000497080 PEG10Q86TG7 708 aaKnown RBP5.72□□□□□ -1.49
RAB3GAP1-206ENST00000497080 PDSS2Q86YH6 399 aa5.72□□□□□ -1.49
RAB3GAP1-206ENST00000497080 POC1BQ8TC44 478 aa5.72□□□□□ -1.49
RAB3GAP1-206ENST00000497080 PGBD1Q96JS3 809 aa5.72□□□□□ -1.49
RAB3GAP1-206ENST00000497080 GNL3LQ9NVN8 582 aaKnown RBP5.72□□□□□ -1.49
RAB3GAP1-206ENST00000497080 POLHQ9Y253 713 aa5.72□□□□□ -1.49
RAB3GAP1-206ENST00000497080 CCDC151A5D8V7 595 aa5.71□□□□□ -1.5
RAB3GAP1-206ENST00000497080 ADM5C9JUS6 153 aa5.71□□□□□ -1.5
RAB3GAP1-206ENST00000497080 F5H697 171 aa5.71□□□□□ -1.5
RAB3GAP1-206ENST00000497080 SNUPNO95149 360 aaKnown RBP5.71□□□□□ -1.5
RAB3GAP1-206ENST00000497080 GNAI3P08754 354 aa5.71□□□□□ -1.5
RAB3GAP1-206ENST00000497080 ELFN1P0C7U0 828 aa5.71□□□□□ -1.5
RAB3GAP1-206ENST00000497080 GRIA3P42263 894 aa5.71□□□□□ -1.5
RAB3GAP1-206ENST00000497080 NPTX2P47972 431 aa5.71□□□□□ -1.5
RAB3GAP1-206ENST00000497080 GNAI1P63096 354 aa5.71□□□□□ -1.5
RAB3GAP1-206ENST00000497080 HABP2Q14520 560 aaPredicted RBP5.71□□□□□ -1.5
RAB3GAP1-206ENST00000497080 C1orf43Q9BWL3 253 aa5.71□□□□□ -1.5
RAB3GAP1-206ENST00000497080 SMOC2Q9H3U7 446 aa5.71□□□□□ -1.5
RAB3GAP1-206ENST00000497080 CPNE5Q9HCH3 593 aa5.71□□□□□ -1.5
RAB3GAP1-206ENST00000497080 MRPS18AQ9NVS2 196 aaKnown RBP5.71□□□□□ -1.5
RAB3GAP1-206ENST00000497080 CFAP97Q9P2B7 532 aa5.71□□□□□ -1.5
RAB3GAP1-206ENST00000497080 VWC2LB2RUY7 222 aa5.7□□□□□ -1.5
RAB3GAP1-206ENST00000497080 E7ENX8 843 aa5.7□□□□□ -1.5
RAB3GAP1-206ENST00000497080 ORC4O43929 436 aa5.7□□□□□ -1.5
RAB3GAP1-206ENST00000497080 VPS4BO75351 444 aa5.7□□□□□ -1.5
RAB3GAP1-206ENST00000497080 PRDX5P30044 214 aa5.7□□□□□ -1.5
RAB3GAP1-206ENST00000497080 ZNF135P52742 658 aaPredicted RBP5.7□□□□□ -1.5
RAB3GAP1-206ENST00000497080 TAP2Q03519 686 aa5.7□□□□□ -1.5
RAB3GAP1-206ENST00000497080 NBPF8Q3BBV2 869 aa5.7□□□□□ -1.5
RAB3GAP1-206ENST00000497080 GRASPQ7Z6J2 395 aaPredicted RBP5.7□□□□□ -1.5
RAB3GAP1-206ENST00000497080 FAM9AQ8IZU1 332 aaPredicted RBP5.7□□□□□ -1.5
RAB3GAP1-206ENST00000497080 PRR18Q8N4B5 295 aa5.7□□□□□ -1.5
RAB3GAP1-206ENST00000497080 B3GALNT2Q8NCR0 500 aa5.7□□□□□ -1.5
RAB3GAP1-206ENST00000497080 UROC1Q96N76 676 aa5.7□□□□□ -1.5
RAB3GAP1-206ENST00000497080 HOMER2Q9NSB8 354 aa5.7□□□□□ -1.5
RAB3GAP1-206ENST00000497080 ST3GAL5Q9UNP4 418 aa5.7□□□□□ -1.5
RAB3GAP1-206ENST00000497080 AGAP1Q9UPQ3 857 aa5.7□□□□□ -1.5
RAB3GAP1-206ENST00000497080 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.7□□□□□ -1.5
RAB3GAP1-206ENST00000497080 NR2E3Q9Y5X4 410 aa5.7□□□□□ -1.5
RAB3GAP1-206ENST00000497080 A0A0B4J269 797 aa5.69□□□□□ -1.5
RAB3GAP1-206ENST00000497080 PIK3CGP48736 1102 aa5.69□□□□□ -1.5
RAB3GAP1-206ENST00000497080 NXPH1P58417 271 aa5.69□□□□□ -1.5
RAB3GAP1-206ENST00000497080 NHLH1Q02575 133 aa5.69□□□□□ -1.5
RAB3GAP1-206ENST00000497080 NOGQ13253 232 aa5.69□□□□□ -1.5
RAB3GAP1-206ENST00000497080 TUBB3Q13509 450 aa5.69□□□□□ -1.5
RAB3GAP1-206ENST00000497080 TXNRD1Q16881 649 aa5.69□□□□□ -1.5
RAB3GAP1-206ENST00000497080 BRDTQ58F21 947 aaPredicted RBP5.69□□□□□ -1.5
RAB3GAP1-206ENST00000497080 TSTD2Q5T7W7 516 aa5.69□□□□□ -1.5
RAB3GAP1-206ENST00000497080 ZKSCAN2Q63HK3 967 aa5.69□□□□□ -1.5
RAB3GAP1-206ENST00000497080 TAF2Q6P1X5 1199 aa5.69□□□□□ -1.5
RAB3GAP1-206ENST00000497080 USP45Q70EL2 814 aa5.69□□□□□ -1.5
RAB3GAP1-206ENST00000497080 HEATR3Q7Z4Q2 680 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms