RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 RHOBTB2Q9BYZ6 727 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 TRIM5Q9C035 493 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 ZWILCHQ9H900 591 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 PSTPIP2Q9H939 334 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 XAB2Q9HCS7 855 aaKnown RBP3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 UBN1Q9NPG3 1134 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 DCP1AQ9NPI6 582 aaPredicted RBP3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 EMC3Q9P0I2 261 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 WHRNQ9P202 907 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 RBPJLQ9UBG7 517 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 GIMAP2Q9UG22 337 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 ZNF112Q9UJU3 913 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 ZMYND8Q9ULU4 1186 aaPredicted RBP3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 HPCAL4Q9UM19 191 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 PHTF1Q9UMS5 762 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 NUDCQ9Y266 331 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 TRAF6Q9Y4K3 522 aa3.34□□□□□ -1.88
SNRNP48-202ENST00000496946 LAMC3Q9Y6N6 1575 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 RPAP1Q9BWH6 1393 aaPredicted RBP3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 ANO9A1A5B4 782 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 RSPH10B2B2RC85 870 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 AP3B1O00203 1094 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 PDPK1O15530 556 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 STRNO43815 780 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 ACSL4O60488 711 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 RPS6KA5O75582 802 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 ERLIN2O94905 339 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 ZNF205O95201 554 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 PENKP01210 267 aaPredicted RBP3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 CD4P01730 458 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 RHOXF2BP0C7M4 288 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 RSPH10BP0C881 870 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 EEF2P13639 858 aaKnown RBP3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 S100A1P23297 94 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 ACTN2P35609 894 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 LIMS1P48059 325 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 MAN2A2P49641 1150 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 SLC12A2P55011 1212 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 UBXN1Q04323 297 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 STK11Q15831 433 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 CLUL1Q15846 466 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 SNCBQ16143 134 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 DDR2Q16832 855 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 GEN1Q17RS7 908 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 LETM2Q2VYF4 491 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 C2orf27AQ580R0 203 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 SLC45A4Q5BKX6 768 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 TMTC4Q5T4D3 741 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 PHF19Q5T6S3 580 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 FOXB2Q5VYV0 432 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 GTF2IRD2BQ6EKJ0 949 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 TATDN1Q6P1N9 297 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 CNSTQ6PJW8 725 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 CLEC17AQ6ZS10 378 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 LRP10Q7Z4F1 713 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 TBC1D1Q86TI0 1168 aaPredicted RBP3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 SLCO6A1Q86UG4 719 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 GTF2IRD2Q86UP8 949 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 CAND1Q86VP6 1230 aaKnown RBP3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 TMEM145Q8NBT3 493 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 NAXEQ8NCW5 288 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 TOR1AIP2Q8NFQ8 470 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 GOT1L1Q8NHS2 421 aaPredicted RBP3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 EXOC6Q8TAG9 804 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 DEPTORQ8TB45 409 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 NSUN6Q8TEA1 469 aaKnown RBP3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 INTS12Q96CB8 462 aaKnown RBP3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 INTS4Q96HW7 963 aaKnown RBP3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 LRGUKQ96M69 825 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 TTC25Q96NG3 672 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 RHOXF2Q9BQY4 288 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 B3GNT4Q9C0J1 378 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 STMN4Q9H169 189 aaPredicted RBP3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 CLSTN2Q9H4D0 955 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 MARCH2Q9P0N8 246 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 ARHGAP28Q9P2N2 729 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 PPARGC1AQ9UBK2 798 aaKnown RBP3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 MTRRQ9UBK8 725 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 MALT1Q9UDY8 824 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 PRKAG3Q9UGI9 489 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 TMEM5Q9Y2B1 443 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 GIT1Q9Y2X7 761 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 PCDHB2Q9Y5E7 798 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 FHOD1Q9Y613 1164 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 KDM2BQ8NHM5 1336 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 MYO3BQ8WXR4 1341 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 A0A087X0B3 334 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 FGF10O15520 208 aaPredicted RBP3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 SLC7A4O43246 635 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 SUSD5O60279 629 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 RANBP6O60518 1105 aaKnown RBP3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 MSCO60682 206 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 TMCC1O94876 653 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 FBXO21O94952 628 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 MT-ND3P03897 115 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 EPB41P11171 864 aaKnown RBP3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 P4HA1P13674 534 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 STMN1P16949 149 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 TMEM11P17152 192 aa3.33□□□□□ -1.88
SNRNP48-202ENST00000496946 TYRP1P17643 537 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms