RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 SPTLC1O15269 473 aa20.72■□□□□ 0.91
CTDSP1-213ENST00000496785 HUS1O60921 280 aa20.72■□□□□ 0.91
CTDSP1-213ENST00000496785 PHACTR2O75167 634 aa20.72■□□□□ 0.91
CTDSP1-213ENST00000496785 ZMYND10O75800 440 aa20.72■□□□□ 0.91
CTDSP1-213ENST00000496785 HNRNPA1P09651 372 aaKnown RBP eCLIP20.72■□□□□ 0.91
CTDSP1-213ENST00000496785 CPB1P15086 417 aa20.72■□□□□ 0.91
CTDSP1-213ENST00000496785 ROR1Q01973 937 aa20.72■□□□□ 0.91
CTDSP1-213ENST00000496785 TRPC3Q13507 836 aa20.72■□□□□ 0.91
CTDSP1-213ENST00000496785 TMC5Q6UXY8 1006 aa20.72■□□□□ 0.91
CTDSP1-213ENST00000496785 GPR149Q86SP6 731 aa20.72■□□□□ 0.91
CTDSP1-213ENST00000496785 FAM186BQ8IYM0 893 aa20.72■□□□□ 0.91
CTDSP1-213ENST00000496785 ADSSL1Q8N142 457 aa20.72■□□□□ 0.91
CTDSP1-213ENST00000496785 TMEM130Q8N3G9 435 aa20.72■□□□□ 0.91
CTDSP1-213ENST00000496785 SPATA18Q8TC71 538 aa20.72■□□□□ 0.91
CTDSP1-213ENST00000496785 GDAP2Q9NXN4 497 aa20.72■□□□□ 0.91
CTDSP1-213ENST00000496785 TIMM13Q9Y5L4 95 aaPredicted RBP20.72■□□□□ 0.91
CTDSP1-213ENST00000496785 PTPRJQ12913 1337 aa20.72■□□□□ 0.91
CTDSP1-213ENST00000496785 PLXNA3P51805 1871 aa20.71■□□□□ 0.91
CTDSP1-213ENST00000496785 CCDC195A0A1B0GUA6 201 aa20.71■□□□□ 0.91
CTDSP1-213ENST00000496785 IKBKBO14920 756 aa20.71■□□□□ 0.91
CTDSP1-213ENST00000496785 ADAM12O43184 909 aa20.71■□□□□ 0.91
CTDSP1-213ENST00000496785 XYLBO75191 536 aa20.71■□□□□ 0.91
CTDSP1-213ENST00000496785 C8AP07357 584 aa20.71■□□□□ 0.91
CTDSP1-213ENST00000496785 SPATA31D3P0C874 917 aa20.71■□□□□ 0.91
CTDSP1-213ENST00000496785 EPB41P11171 864 aaKnown RBP20.71■□□□□ 0.91
CTDSP1-213ENST00000496785 CASP4P49662 377 aa20.71■□□□□ 0.91
CTDSP1-213ENST00000496785 ARPP19P56211 112 aa20.71■□□□□ 0.91
CTDSP1-213ENST00000496785 CLDN10P78369 228 aa20.71■□□□□ 0.91
CTDSP1-213ENST00000496785 FKBP3Q00688 224 aaKnown RBP20.71■□□□□ 0.91
CTDSP1-213ENST00000496785 MORC3Q14149 939 aa20.71■□□□□ 0.91
CTDSP1-213ENST00000496785 PPM1LQ5SGD2 360 aa20.71■□□□□ 0.91
CTDSP1-213ENST00000496785 SPATA31D4Q6ZUB0 917 aa20.71■□□□□ 0.91
CTDSP1-213ENST00000496785 DPH6Q7L8W6 267 aa20.71■□□□□ 0.91
CTDSP1-213ENST00000496785 TMEM86AQ8N2M4 240 aa20.71■□□□□ 0.91
CTDSP1-213ENST00000496785 C12orf76Q8N812 135 aaPredicted RBP20.71■□□□□ 0.91
CTDSP1-213ENST00000496785 HPDLQ96IR7 371 aa20.71■□□□□ 0.91
CTDSP1-213ENST00000496785 COL25A1Q9BXS0 654 aaPredicted RBP20.71■□□□□ 0.91
CTDSP1-213ENST00000496785 KIAA1468Q9P260 1216 aa20.71■□□□□ 0.91
CTDSP1-213ENST00000496785 AFF4Q9UHB7 1163 aaKnown RBP20.71■□□□□ 0.91
CTDSP1-213ENST00000496785 SIX4Q9UIU6 781 aa20.71■□□□□ 0.91
CTDSP1-213ENST00000496785 BICDL2A1A5D9 508 aa20.7■□□□□ 0.9
CTDSP1-213ENST00000496785 ABLIM3O94929 683 aa20.7■□□□□ 0.9
CTDSP1-213ENST00000496785 PAPLNO95428 1278 aa20.7■□□□□ 0.9
CTDSP1-213ENST00000496785 ATF2P15336 505 aa20.7■□□□□ 0.9
CTDSP1-213ENST00000496785 CCNE1P24864 410 aa20.7■□□□□ 0.9
CTDSP1-213ENST00000496785 ATICP31939 592 aa20.7■□□□□ 0.9
CTDSP1-213ENST00000496785 VAMP7P51809 220 aa20.7■□□□□ 0.9
CTDSP1-213ENST00000496785 BIRC3Q13489 604 aa20.7■□□□□ 0.9
CTDSP1-213ENST00000496785 RSPO2Q6UXX9 243 aaPredicted RBP20.7■□□□□ 0.9
CTDSP1-213ENST00000496785 TOP6BLQ8N6T0 577 aa20.7■□□□□ 0.9
CTDSP1-213ENST00000496785 CXorf38Q8TB03 319 aa20.7■□□□□ 0.9
CTDSP1-213ENST00000496785 SYAP1Q96A49 352 aaPredicted RBP20.7■□□□□ 0.9
CTDSP1-213ENST00000496785 BORCS6Q96GS4 357 aa20.7■□□□□ 0.9
CTDSP1-213ENST00000496785 PRKD2Q9BZL6 878 aa20.7■□□□□ 0.9
CTDSP1-213ENST00000496785 CLSTN2Q9H4D0 955 aa20.7■□□□□ 0.9
CTDSP1-213ENST00000496785 PIDD1Q9HB75 910 aa20.7■□□□□ 0.9
CTDSP1-213ENST00000496785 LMBRD1Q9NUN5 540 aa20.7■□□□□ 0.9
CTDSP1-213ENST00000496785 SNX9Q9Y5X1 595 aa20.7■□□□□ 0.9
CTDSP1-213ENST00000496785 WDR27A2RRH5 827 aa20.69■□□□□ 0.9
CTDSP1-213ENST00000496785 LRRIQ3A6PVS8 624 aaPredicted RBP20.69■□□□□ 0.9
CTDSP1-213ENST00000496785 PRRG1O14668 218 aa20.69■□□□□ 0.9
CTDSP1-213ENST00000496785 STX10O60499 249 aa20.69■□□□□ 0.9
CTDSP1-213ENST00000496785 AKAP3O75969 853 aa20.69■□□□□ 0.9
CTDSP1-213ENST00000496785 STAU1O95793 577 aaKnown RBP20.69■□□□□ 0.9
CTDSP1-213ENST00000496785 POU2F2P09086 479 aa20.69■□□□□ 0.9
CTDSP1-213ENST00000496785 SSTR3P32745 418 aaPredicted RBP20.69■□□□□ 0.9
CTDSP1-213ENST00000496785 ZP2Q05996 745 aa20.69■□□□□ 0.9
CTDSP1-213ENST00000496785 SMARCB1Q12824 385 aa20.69■□□□□ 0.9
CTDSP1-213ENST00000496785 CAMK4Q16566 473 aa20.69■□□□□ 0.9
CTDSP1-213ENST00000496785 ISM2Q6H9L7 571 aa20.69■□□□□ 0.9
CTDSP1-213ENST00000496785 FOXR2Q6PJQ5 311 aa20.69■□□□□ 0.9
CTDSP1-213ENST00000496785 SLC7A14Q8TBB6 771 aa20.69■□□□□ 0.9
CTDSP1-213ENST00000496785 SMG7Q92540 1137 aaKnown RBP20.69■□□□□ 0.9
CTDSP1-213ENST00000496785 NUP62CLQ9H1M0 184 aa20.69■□□□□ 0.9
CTDSP1-213ENST00000496785 NR2E1Q9Y466 385 aa20.69■□□□□ 0.9
CTDSP1-213ENST00000496785 SCN1AP35498 2009 aa20.69■□□□□ 0.9
CTDSP1-213ENST00000496785 MTCL1Q9Y4B5 1905 aaKnown RBP20.68■□□□□ 0.9
CTDSP1-213ENST00000496785 UNC80Q8N2C7 3258 aa20.68■□□□□ 0.9
CTDSP1-213ENST00000496785 BIN1O00499 593 aa20.68■□□□□ 0.9
CTDSP1-213ENST00000496785 SLC16A3O15427 465 aaKnown RBP20.68■□□□□ 0.9
CTDSP1-213ENST00000496785 MYL7Q01449 175 aa20.68■□□□□ 0.9
CTDSP1-213ENST00000496785 GPR17Q13304 367 aa20.68■□□□□ 0.9
CTDSP1-213ENST00000496785 WSCD1Q658N2 575 aa20.68■□□□□ 0.9
CTDSP1-213ENST00000496785 TCEAL8Q8IYN2 117 aa20.68■□□□□ 0.9
CTDSP1-213ENST00000496785 GJD3Q8N144 294 aa20.68■□□□□ 0.9
CTDSP1-213ENST00000496785 TCF20Q9UGU0 1960 aaKnown RBP20.68■□□□□ 0.9
CTDSP1-213ENST00000496785 DLL1O00548 723 aa20.67■□□□□ 0.9
CTDSP1-213ENST00000496785 RFPL2O75678 378 aa20.67■□□□□ 0.9
CTDSP1-213ENST00000496785 CLSTN1O94985 981 aa20.67■□□□□ 0.9
CTDSP1-213ENST00000496785 LRG1P02750 347 aa20.67■□□□□ 0.9
CTDSP1-213ENST00000496785 FAM163BP0C2L3 166 aa20.67■□□□□ 0.9
CTDSP1-213ENST00000496785 LHX1P48742 406 aa20.67■□□□□ 0.9
CTDSP1-213ENST00000496785 TNNC1P63316 161 aa20.67■□□□□ 0.9
CTDSP1-213ENST00000496785 TSPY1Q01534 308 aa20.67■□□□□ 0.9
CTDSP1-213ENST00000496785 ANKRD40Q6AI12 368 aa20.67■□□□□ 0.9
CTDSP1-213ENST00000496785 DCP1BQ8IZD4 617 aaKnown RBP20.67■□□□□ 0.9
CTDSP1-213ENST00000496785 ADGRF2Q8IZF7 708 aa20.67■□□□□ 0.9
CTDSP1-213ENST00000496785 PDCL2Q8N4E4 241 aa20.67■□□□□ 0.9
CTDSP1-213ENST00000496785 PLEKHO2Q8TD55 490 aa20.67■□□□□ 0.9
CTDSP1-213ENST00000496785 ZNF516Q92618 1163 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms