RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 DPP3Q9NY33 737 aa13.4□□□□□ -0.26
CLDN12-213ENST00000496677 GDE1Q9NZC3 331 aa13.4□□□□□ -0.26
CLDN12-213ENST00000496677 PCDHA7Q9UN72 937 aa13.4□□□□□ -0.26
CLDN12-213ENST00000496677 MRPS23Q9Y3D9 190 aaKnown RBP13.4□□□□□ -0.26
CLDN12-213ENST00000496677 GTF3C3Q9Y5Q9 886 aa13.4□□□□□ -0.26
CLDN12-213ENST00000496677 CEBPBP17676 345 aa13.39□□□□□ -0.27
CLDN12-213ENST00000496677 TWF1Q12792 350 aa13.39□□□□□ -0.27
CLDN12-213ENST00000496677 CENPPQ6IPU0 288 aa13.39□□□□□ -0.27
CLDN12-213ENST00000496677 MTSS1LQ765P7 747 aa13.39□□□□□ -0.27
CLDN12-213ENST00000496677 USP37Q86T82 979 aa13.39□□□□□ -0.27
CLDN12-213ENST00000496677 ALYREFQ86V81 257 aaKnown RBP13.39□□□□□ -0.27
CLDN12-213ENST00000496677 NT5DC4Q86YG4 428 aa13.39□□□□□ -0.27
CLDN12-213ENST00000496677 BRSK2Q8IWQ3 736 aa13.39□□□□□ -0.27
CLDN12-213ENST00000496677 HS6ST3Q8IZP7 471 aa13.39□□□□□ -0.27
CLDN12-213ENST00000496677 IQUBQ8NA54 791 aa13.39□□□□□ -0.27
CLDN12-213ENST00000496677 ING5Q8WYH8 240 aa13.39□□□□□ -0.27
CLDN12-213ENST00000496677 SAAL1Q96ER3 474 aa13.39□□□□□ -0.27
CLDN12-213ENST00000496677 CORO1BQ9BR76 489 aa13.39□□□□□ -0.27
CLDN12-213ENST00000496677 PLA2G2FQ9BZM2 168 aa13.39□□□□□ -0.27
CLDN12-213ENST00000496677 LRRC27Q9C0I9 530 aa13.39□□□□□ -0.27
CLDN12-213ENST00000496677 FBXL21Q9UKT6 434 aa13.39□□□□□ -0.27
CLDN12-213ENST00000496677 EXTL3O43909 919 aa13.38□□□□□ -0.27
CLDN12-213ENST00000496677 ECI2O75521 394 aa13.38□□□□□ -0.27
CLDN12-213ENST00000496677 LDHAP00338 332 aaKnown RBP13.38□□□□□ -0.27
CLDN12-213ENST00000496677 ODC1P11926 461 aa13.38□□□□□ -0.27
CLDN12-213ENST00000496677 CPB1P15086 417 aa13.38□□□□□ -0.27
CLDN12-213ENST00000496677 FCARP24071 287 aa13.38□□□□□ -0.27
CLDN12-213ENST00000496677 MRE11P49959 708 aa13.38□□□□□ -0.27
CLDN12-213ENST00000496677 DNM1Q05193 864 aaKnown RBP13.38□□□□□ -0.27
CLDN12-213ENST00000496677 DUSP4Q13115 394 aa13.38□□□□□ -0.27
CLDN12-213ENST00000496677 FOXD4L6Q3SYB3 417 aaPredicted RBP13.38□□□□□ -0.27
CLDN12-213ENST00000496677 RESP18Q5W5W9 173 aa13.38□□□□□ -0.27
CLDN12-213ENST00000496677 PHLDB3Q6NSJ2 640 aa13.38□□□□□ -0.27
CLDN12-213ENST00000496677 FOXD4L3Q6VB84 417 aaPredicted RBP13.38□□□□□ -0.27
CLDN12-213ENST00000496677 FLCNQ8NFG4 579 aa13.38□□□□□ -0.27
CLDN12-213ENST00000496677 OR10T2Q8NGX3 314 aa13.38□□□□□ -0.27
CLDN12-213ENST00000496677 ZNF507Q8TCN5 953 aa13.38□□□□□ -0.27
CLDN12-213ENST00000496677 KCNG4Q8TDN1 519 aa13.38□□□□□ -0.27
CLDN12-213ENST00000496677 DHX58Q96C10 678 aa13.38□□□□□ -0.27
CLDN12-213ENST00000496677 MCRS1Q96EZ8 462 aa13.38□□□□□ -0.27
CLDN12-213ENST00000496677 ZNF512Q96ME7 567 aaPredicted RBP13.38□□□□□ -0.27
CLDN12-213ENST00000496677 ZSWIM3Q96MP5 696 aa13.38□□□□□ -0.27
CLDN12-213ENST00000496677 PGLYRP2Q96PD5 576 aa13.38□□□□□ -0.27
CLDN12-213ENST00000496677 ZCWPW1Q9H0M4 648 aa13.38□□□□□ -0.27
CLDN12-213ENST00000496677 DNAJC25Q9H1X3 360 aa13.38□□□□□ -0.27
CLDN12-213ENST00000496677 MFSD1Q9H3U5 465 aa13.38□□□□□ -0.27
CLDN12-213ENST00000496677 TMEM206Q9H813 350 aa13.38□□□□□ -0.27
CLDN12-213ENST00000496677 CA14Q9ULX7 337 aa13.38□□□□□ -0.27
CLDN12-213ENST00000496677 ZDHHC9Q9Y397 364 aa13.38□□□□□ -0.27
CLDN12-213ENST00000496677 TSC2P49815 1807 aa13.37□□□□□ -0.27
CLDN12-213ENST00000496677 MTMR11A4FU01 709 aa13.37□□□□□ -0.27
CLDN12-213ENST00000496677 GOLGA8IPA6NC78 632 aa13.37□□□□□ -0.27
CLDN12-213ENST00000496677 GOLGA8JA6NMD2 632 aa13.37□□□□□ -0.27
CLDN12-213ENST00000496677 CYB561D2O14569 222 aa13.37□□□□□ -0.27
CLDN12-213ENST00000496677 ZNF197O14709 1029 aa13.37□□□□□ -0.27
CLDN12-213ENST00000496677 POLR2DO15514 142 aaKnown RBP13.37□□□□□ -0.27
CLDN12-213ENST00000496677 TGFB1I1O43294 461 aa13.37□□□□□ -0.27
CLDN12-213ENST00000496677 TAF6P49848 677 aa13.37□□□□□ -0.27
CLDN12-213ENST00000496677 STARD6P59095 220 aa13.37□□□□□ -0.27
CLDN12-213ENST00000496677 FAM78AQ5JUQ0 283 aa13.37□□□□□ -0.27
CLDN12-213ENST00000496677 TANGO2Q6ICL3 276 aa13.37□□□□□ -0.27
CLDN12-213ENST00000496677 LRRTM3Q86VH5 581 aa13.37□□□□□ -0.27
CLDN12-213ENST00000496677 TMC8Q8IU68 726 aa13.37□□□□□ -0.27
CLDN12-213ENST00000496677 SYCP3Q8IZU3 236 aa13.37□□□□□ -0.27
CLDN12-213ENST00000496677 C1orf127Q8N9H9 656 aa13.37□□□□□ -0.27
CLDN12-213ENST00000496677 ATAD1Q8NBU5 361 aa13.37□□□□□ -0.27
CLDN12-213ENST00000496677 FAM84AQ96KN4 292 aa13.37□□□□□ -0.27
CLDN12-213ENST00000496677 KXD1Q9BQD3 176 aa13.37□□□□□ -0.27
CLDN12-213ENST00000496677 DDX23Q9BUQ8 820 aaKnown RBP13.37□□□□□ -0.27
CLDN12-213ENST00000496677 PCIF1Q9H4Z3 704 aa13.37□□□□□ -0.27
CLDN12-213ENST00000496677 RBAKQ9NYW8 714 aaPredicted RBP13.37□□□□□ -0.27
CLDN12-213ENST00000496677 DLGAP2Q9P1A6 1054 aa13.37□□□□□ -0.27
CLDN12-213ENST00000496677 HSFX1Q9UBD0 423 aa13.37□□□□□ -0.27
CLDN12-213ENST00000496677 SIX4Q9UIU6 781 aa13.37□□□□□ -0.27
CLDN12-213ENST00000496677 SLC27A5Q9Y2P5 690 aa13.37□□□□□ -0.27
CLDN12-213ENST00000496677 YIPF1Q9Y548 306 aa13.37□□□□□ -0.27
CLDN12-213ENST00000496677 KPNA7A9QM74 516 aa13.36□□□□□ -0.27
CLDN12-213ENST00000496677 H0Y858 1186 aa13.36□□□□□ -0.27
CLDN12-213ENST00000496677 KIAA0391O15091 583 aaKnown RBP13.36□□□□□ -0.27
CLDN12-213ENST00000496677 HSP90AA1P07900 732 aaKnown RBP13.36□□□□□ -0.27
CLDN12-213ENST00000496677 CASP1P29466 404 aa13.36□□□□□ -0.27
CLDN12-213ENST00000496677 AMPD3Q01432 767 aa13.36□□□□□ -0.27
CLDN12-213ENST00000496677 CYP4A22Q5TCH4 519 aa13.36□□□□□ -0.27
CLDN12-213ENST00000496677 WSCD1Q658N2 575 aa13.36□□□□□ -0.27
CLDN12-213ENST00000496677 LIMS2Q7Z4I7 341 aa13.36□□□□□ -0.27
CLDN12-213ENST00000496677 CCDC105Q8IYK2 499 aa13.36□□□□□ -0.27
CLDN12-213ENST00000496677 TTC9BQ8N6N2 239 aa13.36□□□□□ -0.27
CLDN12-213ENST00000496677 LEMD2Q8NC56 503 aa13.36□□□□□ -0.27
CLDN12-213ENST00000496677 SPRYD3Q8NCJ5 442 aa13.36□□□□□ -0.27
CLDN12-213ENST00000496677 SHKBP1Q8TBC3 707 aa13.36□□□□□ -0.27
CLDN12-213ENST00000496677 ELSPBP1Q96BH3 223 aa13.36□□□□□ -0.27
CLDN12-213ENST00000496677 PYM1Q9BRP8 204 aaKnown RBP13.36□□□□□ -0.27
CLDN12-213ENST00000496677 IRF2BPLQ9H1B7 796 aa13.36□□□□□ -0.27
CLDN12-213ENST00000496677 TBC1D17Q9HA65 648 aa13.36□□□□□ -0.27
CLDN12-213ENST00000496677 MAGEF1Q9HAY2 307 aa13.36□□□□□ -0.27
CLDN12-213ENST00000496677 PDE11AQ9HCR9 933 aa13.36□□□□□ -0.27
CLDN12-213ENST00000496677 ARHGEF3Q9NR81 526 aa13.36□□□□□ -0.27
CLDN12-213ENST00000496677 DSEQ9UL01 958 aa13.36□□□□□ -0.27
CLDN12-213ENST00000496677 CFAP45Q9UL16 551 aa13.36□□□□□ -0.27
CLDN12-213ENST00000496677 PVALEFA0A1B0GWK0 134 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms