RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 GCNAQ96QF7 691 aa12.85□□□□□ -0.35
ATG3-209ENST00000496423 OXCT2Q9BYC2 517 aaPredicted RBP12.85□□□□□ -0.35
ATG3-209ENST00000496423 CLMPQ9H6B4 373 aa12.85□□□□□ -0.35
ATG3-209ENST00000496423 SLC38A7Q9NVC3 462 aa12.85□□□□□ -0.35
ATG3-209ENST00000496423 MBD1Q9UIS9 605 aaPredicted RBP12.85□□□□□ -0.35
ATG3-209ENST00000496423 RBM8AQ9Y5S9 174 aaKnown RBP12.85□□□□□ -0.35
ATG3-209ENST00000496423 BPTFQ12830 3046 aa12.85□□□□□ -0.35
ATG3-209ENST00000496423 SMG1Q96Q15 3661 aaKnown RBP12.84□□□□□ -0.35
ATG3-209ENST00000496423 I3L4J1 428 aa12.84□□□□□ -0.35
ATG3-209ENST00000496423 C1QL1O75973 258 aa12.84□□□□□ -0.35
ATG3-209ENST00000496423 MARCKSP29966 332 aaPredicted RBP12.84□□□□□ -0.35
ATG3-209ENST00000496423 FAM193AP78312 1265 aa12.84□□□□□ -0.35
ATG3-209ENST00000496423 CAPSQ13938 189 aa12.84□□□□□ -0.35
ATG3-209ENST00000496423 LYSMD4Q5XG99 296 aa12.84□□□□□ -0.35
ATG3-209ENST00000496423 LRRC69Q6ZNQ3 347 aa12.84□□□□□ -0.35
ATG3-209ENST00000496423 TBCKQ8TEA7 893 aa12.84□□□□□ -0.35
ATG3-209ENST00000496423 CNOT6LQ96LI5 555 aaKnown RBP12.84□□□□□ -0.35
ATG3-209ENST00000496423 TBC1D32Q96NH3 1257 aa12.84□□□□□ -0.35
ATG3-209ENST00000496423 LRRC2Q9BYS8 371 aa12.84□□□□□ -0.35
ATG3-209ENST00000496423 RWDD1Q9H446 243 aaPredicted RBP12.84□□□□□ -0.35
ATG3-209ENST00000496423 TASP1Q9H6P5 420 aa12.84□□□□□ -0.35
ATG3-209ENST00000496423 ZSWIM4Q9H7M6 989 aa12.84□□□□□ -0.35
ATG3-209ENST00000496423 URB1O60287 2271 aaKnown RBP12.84□□□□□ -0.35
ATG3-209ENST00000496423 ACACAQ13085 2346 aa12.84□□□□□ -0.35
ATG3-209ENST00000496423 PI4KAP42356 2102 aa12.83□□□□□ -0.35
ATG3-209ENST00000496423 CYP3A7-CYP3A51PA0A087WV96 503 aa12.83□□□□□ -0.36
ATG3-209ENST00000496423 DGAT1O75907 488 aa12.83□□□□□ -0.36
ATG3-209ENST00000496423 SERPINF2P08697 491 aa12.83□□□□□ -0.36
ATG3-209ENST00000496423 BCKDHBP21953 392 aa12.83□□□□□ -0.36
ATG3-209ENST00000496423 CYP3A7P24462 503 aa12.83□□□□□ -0.36
ATG3-209ENST00000496423 KCNC4Q03721 635 aa12.83□□□□□ -0.36
ATG3-209ENST00000496423 PPP2R5CQ13362 524 aa12.83□□□□□ -0.36
ATG3-209ENST00000496423 MRPL58Q14197 206 aaKnown RBP12.83□□□□□ -0.36
ATG3-209ENST00000496423 ANO7Q6IWH7 933 aa12.83□□□□□ -0.36
ATG3-209ENST00000496423 TOGARAM2Q6ZUX3 1019 aa12.83□□□□□ -0.36
ATG3-209ENST00000496423 KRT25Q7Z3Z0 450 aa12.83□□□□□ -0.36
ATG3-209ENST00000496423 RASSF3Q86WH2 238 aa12.83□□□□□ -0.36
ATG3-209ENST00000496423 TTC30AQ86WT1 665 aa12.83□□□□□ -0.36
ATG3-209ENST00000496423 MINDY1Q8N5J2 469 aa12.83□□□□□ -0.36
ATG3-209ENST00000496423 LRRC3BQ96PB8 259 aa12.83□□□□□ -0.36
ATG3-209ENST00000496423 POLMQ9NP87 494 aaPredicted RBP12.83□□□□□ -0.36
ATG3-209ENST00000496423 POLR3BQ9NW08 1133 aaPredicted RBP12.83□□□□□ -0.36
ATG3-209ENST00000496423 KIAA1522Q9P206 1035 aaPredicted RBP12.83□□□□□ -0.36
ATG3-209ENST00000496423 GDAQ9Y2T3 454 aa12.83□□□□□ -0.36
ATG3-209ENST00000496423 YIPF1Q9Y548 306 aa12.83□□□□□ -0.36
ATG3-209ENST00000496423 PLXNB3Q9ULL4 1909 aa12.83□□□□□ -0.36
ATG3-209ENST00000496423 FREM2Q5SZK8 3169 aa12.83□□□□□ -0.36
ATG3-209ENST00000496423 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 LRRIQ4A6NIV6 560 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 AP5Z1O43299 807 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 GABRR2P28476 465 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 ARL2P36404 184 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 YARSP54577 528 aaKnown RBP12.82□□□□□ -0.36
ATG3-209ENST00000496423 BFSP1Q12934 665 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 NR1H3Q13133 447 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 PRPF4BQ13523 1007 aaKnown RBP12.82□□□□□ -0.36
ATG3-209ENST00000496423 EPHA7Q15375 998 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 TAF12Q16514 161 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 DCAF4L1Q3SXM0 396 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 STXBP5Q5T5C0 1151 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 MOXD1Q6UVY6 613 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 RNF19BQ6ZMZ0 732 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 ARMCX6Q7L4S7 300 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 TMC8Q8IU68 726 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 NOSTRINQ8IVI9 506 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 TMEFF1Q8IYR6 380 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 GALNT15Q8N3T1 639 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 ZNF843Q8N446 348 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 CPA6Q8N4T0 437 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 PNPLA1Q8N8W4 532 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 CD101Q93033 1021 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 FAM20AQ96MK3 541 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 PPP1R10Q96QC0 940 aaKnown RBP12.82□□□□□ -0.36
ATG3-209ENST00000496423 FAM83CQ9BQN1 747 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 LXNQ9BS40 222 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 LRRC3Q9BY71 257 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 C2orf40Q9H1Z8 148 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 EBF3Q9H4W6 596 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 TOPORSQ9NS56 1045 aaPredicted RBP12.82□□□□□ -0.36
ATG3-209ENST00000496423 TMEM74BQ9NUR3 256 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 NAP1L2Q9ULW6 460 aaPredicted RBP12.82□□□□□ -0.36
ATG3-209ENST00000496423 ADAMTS9Q9P2N4 1935 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 LAMA5O15230 3695 aa12.82□□□□□ -0.36
ATG3-209ENST00000496423 EML1O00423 815 aa12.81□□□□□ -0.36
ATG3-209ENST00000496423 ARHGAP33O14559 1287 aa12.81□□□□□ -0.36
ATG3-209ENST00000496423 CD59P13987 128 aa12.81□□□□□ -0.36
ATG3-209ENST00000496423 CHMLP26374 656 aa12.81□□□□□ -0.36
ATG3-209ENST00000496423 CDC25CP30307 473 aa12.81□□□□□ -0.36
ATG3-209ENST00000496423 RPL9P32969 192 aaKnown RBP12.81□□□□□ -0.36
ATG3-209ENST00000496423 AVPR1AP37288 418 aa12.81□□□□□ -0.36
ATG3-209ENST00000496423 RCAN1P53805 252 aa12.81□□□□□ -0.36
ATG3-209ENST00000496423 CYP4F3Q08477 520 aa12.81□□□□□ -0.36
ATG3-209ENST00000496423 PDGFRLQ15198 375 aa12.81□□□□□ -0.36
ATG3-209ENST00000496423 FAM187BQ17R55 369 aa12.81□□□□□ -0.36
ATG3-209ENST00000496423 DNAJB7Q7Z6W7 309 aaPredicted RBP12.81□□□□□ -0.36
ATG3-209ENST00000496423 ETNPPLQ8TBG4 499 aa12.81□□□□□ -0.36
ATG3-209ENST00000496423 PIP4K2CQ8TBX8 421 aa12.81□□□□□ -0.36
ATG3-209ENST00000496423 ASAP3Q8TDY4 903 aa12.81□□□□□ -0.36
ATG3-209ENST00000496423 WHAMMQ8TF30 809 aa12.81□□□□□ -0.36
ATG3-209ENST00000496423 DCBLD2Q96PD2 775 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms