RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 HSFX1Q9UBD0 423 aa16.99■□□□□ 0.31
HDAC4-213ENST00000496347 RCOR1Q9UKL0 485 aa16.99■□□□□ 0.31
HDAC4-213ENST00000496347 YIPF1Q9Y548 306 aa16.99■□□□□ 0.31
HDAC4-213ENST00000496347 ZNF197O14709 1029 aa16.98■□□□□ 0.31
HDAC4-213ENST00000496347 PTPN2P17706 415 aa16.98■□□□□ 0.31
HDAC4-213ENST00000496347 TFAMQ00059 246 aaKnown RBP16.98■□□□□ 0.31
HDAC4-213ENST00000496347 EHHADHQ08426 723 aa16.98■□□□□ 0.31
HDAC4-213ENST00000496347 TWF1Q12792 350 aa16.98■□□□□ 0.31
HDAC4-213ENST00000496347 PRSS36Q5K4E3 855 aa16.98■□□□□ 0.31
HDAC4-213ENST00000496347 IER5LQ5T953 404 aa16.98■□□□□ 0.31
HDAC4-213ENST00000496347 IQCEQ6IPM2 695 aa16.98■□□□□ 0.31
HDAC4-213ENST00000496347 GPD1LQ8N335 351 aa16.98■□□□□ 0.31
HDAC4-213ENST00000496347 SPRYD3Q8NCJ5 442 aa16.98■□□□□ 0.31
HDAC4-213ENST00000496347 PRSS33Q8NF86 280 aa16.98■□□□□ 0.31
HDAC4-213ENST00000496347 CACTINQ8WUQ7 758 aaKnown RBP16.98■□□□□ 0.31
HDAC4-213ENST00000496347 FGF14Q92915 247 aa16.98■□□□□ 0.31
HDAC4-213ENST00000496347 ITGA11Q9UKX5 1188 aa16.98■□□□□ 0.31
HDAC4-213ENST00000496347 CEBPBP17676 345 aa16.97■□□□□ 0.31
HDAC4-213ENST00000496347 EPHA5P54756 1037 aa16.97■□□□□ 0.31
HDAC4-213ENST00000496347 SNRPFP62306 86 aaKnown RBP16.97■□□□□ 0.31
HDAC4-213ENST00000496347 KRT85P78386 507 aa16.97■□□□□ 0.31
HDAC4-213ENST00000496347 PARM1Q6UWI2 310 aa16.97■□□□□ 0.31
HDAC4-213ENST00000496347 PDZD4Q76G19 769 aaPredicted RBP16.97■□□□□ 0.31
HDAC4-213ENST00000496347 METTL23Q86XA0 190 aa16.97■□□□□ 0.31
HDAC4-213ENST00000496347 CEP57L1Q8IYX8 460 aa16.97■□□□□ 0.31
HDAC4-213ENST00000496347 LRRC52Q8N7C0 313 aa16.97■□□□□ 0.31
HDAC4-213ENST00000496347 TMEM105Q8N8V8 129 aa16.97■□□□□ 0.31
HDAC4-213ENST00000496347 GLIS3Q8NEA6 775 aa16.97■□□□□ 0.31
HDAC4-213ENST00000496347 OR10T2Q8NGX3 314 aa16.97■□□□□ 0.31
HDAC4-213ENST00000496347 ING5Q8WYH8 240 aa16.97■□□□□ 0.31
HDAC4-213ENST00000496347 HPS3Q969F9 1004 aa16.97■□□□□ 0.31
HDAC4-213ENST00000496347 CORO1BQ9BR76 489 aa16.97■□□□□ 0.31
HDAC4-213ENST00000496347 IRF2BPLQ9H1B7 796 aa16.97■□□□□ 0.31
HDAC4-213ENST00000496347 KIAA1586Q9HCI6 787 aa16.97■□□□□ 0.31
HDAC4-213ENST00000496347 ASAH2Q9NR71 780 aa16.97■□□□□ 0.31
HDAC4-213ENST00000496347 ARHGEF3Q9NR81 526 aa16.97■□□□□ 0.31
HDAC4-213ENST00000496347 ATP6V1DQ9Y5K8 247 aa16.97■□□□□ 0.31
HDAC4-213ENST00000496347 MIA3Q5JRA6 1907 aa16.97■□□□□ 0.31
HDAC4-213ENST00000496347 MYO15AQ9UKN7 3530 aa16.96■□□□□ 0.31
HDAC4-213ENST00000496347 PVALEFA0A1B0GWK0 134 aa16.96■□□□□ 0.31
HDAC4-213ENST00000496347 MTMR11A4FU01 709 aa16.96■□□□□ 0.31
HDAC4-213ENST00000496347 KPNA7A9QM74 516 aa16.96■□□□□ 0.31
HDAC4-213ENST00000496347 CYB561D2O14569 222 aa16.96■□□□□ 0.31
HDAC4-213ENST00000496347 GALR2O43603 387 aaPredicted RBP16.96■□□□□ 0.31
HDAC4-213ENST00000496347 VNN2O95498 520 aa16.96■□□□□ 0.31
HDAC4-213ENST00000496347 CFHP08603 1231 aa16.96■□□□□ 0.31
HDAC4-213ENST00000496347 OR4Q2P0C623 313 aa16.96■□□□□ 0.31
HDAC4-213ENST00000496347 SLFN14P0C7P3 912 aa16.96■□□□□ 0.31
HDAC4-213ENST00000496347 AOC1P19801 751 aa16.96■□□□□ 0.31
HDAC4-213ENST00000496347 POLR2BP30876 1174 aaKnown RBP16.96■□□□□ 0.31
HDAC4-213ENST00000496347 HOXD11P31277 338 aaPredicted RBP16.96■□□□□ 0.31
HDAC4-213ENST00000496347 WNT7BP56706 349 aa16.96■□□□□ 0.31
HDAC4-213ENST00000496347 SMARCB1Q12824 385 aa16.96■□□□□ 0.31
HDAC4-213ENST00000496347 SURF1Q15526 300 aa16.96■□□□□ 0.31
HDAC4-213ENST00000496347 BMT2Q1RMZ1 405 aa16.96■□□□□ 0.31
HDAC4-213ENST00000496347 CYP4A22Q5TCH4 519 aa16.96■□□□□ 0.31
HDAC4-213ENST00000496347 HS2ST1Q7LGA3 356 aa16.96■□□□□ 0.31
HDAC4-213ENST00000496347 C1orf127Q8N9H9 656 aa16.96■□□□□ 0.31
HDAC4-213ENST00000496347 ZSWIM2Q8NEG5 633 aa16.96■□□□□ 0.31
HDAC4-213ENST00000496347 C2orf15Q8WU43 125 aaKnown RBP16.96■□□□□ 0.31
HDAC4-213ENST00000496347 ZNF512Q96ME7 567 aaPredicted RBP16.96■□□□□ 0.31
HDAC4-213ENST00000496347 PGLYRP2Q96PD5 576 aa16.96■□□□□ 0.31
HDAC4-213ENST00000496347 HSPBP1Q9NZL4 362 aa16.96■□□□□ 0.31
HDAC4-213ENST00000496347 USP25Q9UHP3 1055 aa16.96■□□□□ 0.31
HDAC4-213ENST00000496347 NUP210Q8TEM1 1887 aaPredicted RBP16.96■□□□□ 0.31
HDAC4-213ENST00000496347 USP34Q70CQ2 3546 aa16.96■□□□□ 0.31
HDAC4-213ENST00000496347 GOLGA8IPA6NC78 632 aa16.95■□□□□ 0.3
HDAC4-213ENST00000496347 GOLGA8JA6NMD2 632 aa16.95■□□□□ 0.3
HDAC4-213ENST00000496347 ACTN4O43707 911 aaKnown RBP16.95■□□□□ 0.3
HDAC4-213ENST00000496347 ECI2O75521 394 aa16.95■□□□□ 0.3
HDAC4-213ENST00000496347 ITGB3P05106 788 aa16.95■□□□□ 0.3
HDAC4-213ENST00000496347 MYL1P05976 194 aa16.95■□□□□ 0.3
HDAC4-213ENST00000496347 TMEM191BP0C7N4 346 aa16.95■□□□□ 0.3
HDAC4-213ENST00000496347 HOXD13P35453 343 aa16.95■□□□□ 0.3
HDAC4-213ENST00000496347 EPHB3P54753 998 aa16.95■□□□□ 0.3
HDAC4-213ENST00000496347 TCF15Q12870 199 aa16.95■□□□□ 0.3
HDAC4-213ENST00000496347 CENPPQ6IPU0 288 aa16.95■□□□□ 0.3
HDAC4-213ENST00000496347 THEM5Q8N1Q8 247 aa16.95■□□□□ 0.3
HDAC4-213ENST00000496347 FLCNQ8NFG4 579 aa16.95■□□□□ 0.3
HDAC4-213ENST00000496347 SPATA18Q8TC71 538 aa16.95■□□□□ 0.3
HDAC4-213ENST00000496347 ZNF507Q8TCN5 953 aa16.95■□□□□ 0.3
HDAC4-213ENST00000496347 GPR152Q8TDT2 470 aa16.95■□□□□ 0.3
HDAC4-213ENST00000496347 LEO1Q8WVC0 666 aaPredicted RBP16.95■□□□□ 0.3
HDAC4-213ENST00000496347 SCFD1Q8WVM8 642 aa16.95■□□□□ 0.3
HDAC4-213ENST00000496347 SPATA32Q96LK8 384 aa16.95■□□□□ 0.3
HDAC4-213ENST00000496347 RTP3Q9BQQ7 232 aa16.95■□□□□ 0.3
HDAC4-213ENST00000496347 MTMR12Q9C0I1 747 aa16.95■□□□□ 0.3
HDAC4-213ENST00000496347 ZCWPW1Q9H0M4 648 aa16.95■□□□□ 0.3
HDAC4-213ENST00000496347 AGPAT3Q9NRZ7 376 aa16.95■□□□□ 0.3
HDAC4-213ENST00000496347 CEP72Q9P209 647 aa16.95■□□□□ 0.3
HDAC4-213ENST00000496347 CGNQ9P2M7 1197 aaKnown RBP16.95■□□□□ 0.3
HDAC4-213ENST00000496347 ASB3Q9Y575 518 aa16.95■□□□□ 0.3
HDAC4-213ENST00000496347 ZNF233A6NK53 670 aa16.94■□□□□ 0.3
HDAC4-213ENST00000496347 PFKFB1P16118 471 aa16.94■□□□□ 0.3
HDAC4-213ENST00000496347 NPR3P17342 541 aa16.94■□□□□ 0.3
HDAC4-213ENST00000496347 RFX1P22670 979 aa16.94■□□□□ 0.3
HDAC4-213ENST00000496347 CMA1P23946 247 aa16.94■□□□□ 0.3
HDAC4-213ENST00000496347 ALDH1A3P47895 512 aa16.94■□□□□ 0.3
HDAC4-213ENST00000496347 PFKPQ01813 784 aa16.94■□□□□ 0.3
HDAC4-213ENST00000496347 DUSP4Q13115 394 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms