RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 LCHNA4D1U4 455 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 PDXKO00764 312 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 B3GAT3O94766 335 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 GCNT3O95395 438 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 MCF2P10911 925 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 MYL4P12829 197 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 PNPLA4P41247 253 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 SCNN1GP51170 649 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 KIF11P52732 1056 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 YWHAEP62258 255 aaKnown RBP9.13□□□□□ -0.95
VPS13B-206ENST00000496144 PLCB3Q01970 1234 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 RAD51AP2Q09MP3 1159 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 ADAM9Q13443 819 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 DUSP6Q16828 381 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 ASTE1Q2TB18 679 aaPredicted RBP9.13□□□□□ -0.95
VPS13B-206ENST00000496144 LPPQ93052 612 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 RGL1Q9NZL6 768 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 KLK14Q9P0G3 267 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 ZMYM5Q9UJ78 669 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 MAN2B1O00754 1011 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 ATP8B1O43520 1251 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 ATP1A1P05023 1023 aaKnown RBP9.13□□□□□ -0.95
VPS13B-206ENST00000496144 ITGB1P05556 798 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 CLTAP09496 248 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 KCNQ1P51787 676 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 RINT1Q6NUQ1 792 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 B3GNT9Q6UX72 402 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 GANQ9H2C0 597 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 BHMT2Q9H2M3 363 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 BRD9Q9H8M2 597 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 UXTQ9UBK9 157 aaPredicted RBP9.13□□□□□ -0.95
VPS13B-206ENST00000496144 IPPQ9Y573 584 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 KIAA0391O15091 583 aaKnown RBP9.13□□□□□ -0.95
VPS13B-206ENST00000496144 SOD2P04179 222 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 NPEPPSP55786 919 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 BIRC3Q13489 604 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 SPA17Q15506 151 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 RTL10Q7L3V2 364 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 KREMEN2Q8NCW0 462 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 IGSF21Q96ID5 467 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 GAD1Q99259 594 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 OLFML3Q9NRN5 406 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.13□□□□□ -0.95
VPS13B-206ENST00000496144 NT5C1B-RDH14C9J2C7 533 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 PJA2O43164 708 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 MBTPS2O43462 519 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 IL18RAPO95256 599 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 MAGEA9P43362 315 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 TUSC3Q13454 348 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 UBXN2BQ14CS0 331 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 C1orf186Q6ZWK4 172 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 RRAGAQ7L523 313 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 MRPS31Q92665 395 aaKnown RBP9.13□□□□□ -0.95
VPS13B-206ENST00000496144 NELL2Q99435 816 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 PARD6BQ9BYG5 372 aa9.13□□□□□ -0.95
VPS13B-206ENST00000496144 SERPING1P05155 500 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 CTSAP10619 480 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 PTPN2P17706 415 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 RPL9P32969 192 aaKnown RBP9.12□□□□□ -0.95
VPS13B-206ENST00000496144 EIF4A3P38919 411 aaKnown RBP9.12□□□□□ -0.95
VPS13B-206ENST00000496144 NRLP54845 237 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 HGSNATQ68CP4 663 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 FUT10Q6P4F1 479 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 TMC5Q6UXY8 1006 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 TTC30AQ86WT1 665 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 SPPL3Q8TCT6 385 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 EPC1Q9H2F5 836 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 WRAP73Q9P2S5 460 aaPredicted RBP9.12□□□□□ -0.95
VPS13B-206ENST00000496144 ADAM28Q9UKQ2 775 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 BARX2Q9UMQ3 279 aaPredicted RBP9.12□□□□□ -0.95
VPS13B-206ENST00000496144 FRMD4BQ9Y2L6 1034 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 SIP14410 1827 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 LRRC37A2A6NM11 1700 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 ANO9A1A5B4 782 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 CASTOR2A6NHX0 329 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 POU3F3P20264 500 aaPredicted RBP9.12□□□□□ -0.95
VPS13B-206ENST00000496144 DPY19L2P1Q6NXN4 242 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 TMCO3Q6UWJ1 677 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 CCDC42Q96M95 316 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 TBC1D13Q9NVG8 400 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 LCTP09848 1927 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 CCNE2O96020 404 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 RPL10AP62906 217 aaKnown RBP9.12□□□□□ -0.95
VPS13B-206ENST00000496144 POU5F1BQ06416 359 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 TRIM71Q2Q1W2 868 aaKnown RBP9.12□□□□□ -0.95
VPS13B-206ENST00000496144 SFMBT2Q5VUG0 894 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 KRT222Q8N1A0 295 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 KIAA1586Q9HCI6 787 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 SSU72P8A0A1W2PR75 194 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 SEC31AO94979 1220 aaKnown RBP9.12□□□□□ -0.95
VPS13B-206ENST00000496144 NR2F2P24468 414 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 BTBD8Q5XKL5 378 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 MPZL3Q6UWV2 235 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 MMS19Q96T76 1030 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 ODF2LQ9ULJ1 636 aa9.12□□□□□ -0.95
VPS13B-206ENST00000496144 PTENP60484 403 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 MGAT3Q09327 533 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 C4orf50Q6ZRC1 276 aa9.11□□□□□ -0.95
VPS13B-206ENST00000496144 SPATA2LQ8IUW3 424 aaPredicted RBP9.11□□□□□ -0.95
VPS13B-206ENST00000496144 SP7Q8TDD2 431 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms