RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 TRAIPQ9BWF2 469 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 OSBPL8Q9BZF1 889 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 ROPN1BQ9BZX4 212 aaPredicted RBP11.75□□□□□ -0.53
CMSS1-208ENST00000496116 ROPN1Q9HAT0 212 aaPredicted RBP11.75□□□□□ -0.53
CMSS1-208ENST00000496116 CISHQ9NSE2 258 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 SBF1O95248 1867 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 UTRNP46939 3433 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 LOC102724159A0A0B4J2E5 919 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 DCDC2CA8MYV0 355 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 ZBTB42B2RXF5 422 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 ACKR2O00590 384 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 ASAP2O43150 1006 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 TRAPPC3O43617 180 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 HBP1O60381 514 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 KIAA0754O94854 1291 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 CD58P19256 250 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 SSTR3P32745 418 aaPredicted RBP11.75□□□□□ -0.53
CMSS1-208ENST00000496116 TFAMQ00059 246 aaKnown RBP11.75□□□□□ -0.53
CMSS1-208ENST00000496116 LMNB2Q03252 620 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 PWP2Q15269 919 aaKnown RBP11.75□□□□□ -0.53
CMSS1-208ENST00000496116 ZNF699Q32M78 642 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 ZNF568Q3ZCX4 644 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 ATF7IP2Q5U623 682 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 ZNF365Q70YC5 407 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 FASTKD5Q7L8L6 764 aaKnown RBP11.75□□□□□ -0.53
CMSS1-208ENST00000496116 CCDC89Q8N998 374 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 ATG4AQ8WYN0 398 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 KCNH4Q9UQ05 1017 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 A0A087WUV0 522 aaPredicted RBP11.74□□□□□ -0.53
CMSS1-208ENST00000496116 INO80B-WBP1J3KQ70 363 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 RASGRF2O14827 1237 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 PROZP22891 400 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 EIF4BP23588 611 aaKnown RBP11.74□□□□□ -0.53
CMSS1-208ENST00000496116 ADCY8P40145 1251 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 TAS2R40P59535 323 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 PPIL2Q13356 520 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 TTLL12Q14166 644 aaPredicted RBP11.74□□□□□ -0.53
CMSS1-208ENST00000496116 TTLL4Q14679 1199 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 ZFYVE27Q5T4F4 411 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 WDR78Q5VTH9 848 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 DAB2IPQ5VWQ8 1189 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 DNAJC24Q6P3W2 148 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 DCUN1D2Q6PH85 259 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 TAOK1Q7L7X3 1001 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 FBXO16Q8IX29 292 aaPredicted RBP11.74□□□□□ -0.53
CMSS1-208ENST00000496116 RCOR2Q8IZ40 523 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 PPM1EQ8WY54 764 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 CENPTQ96BT3 561 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 NLRP4Q96MN2 994 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 HEMGNQ9BXL5 484 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 INO80BQ9C086 356 aaPredicted RBP11.74□□□□□ -0.53
CMSS1-208ENST00000496116 MROH8Q9H579 483 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 RBPJLQ9UBG7 517 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 GGA2Q9UJY4 613 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 DNAJC25-GNG10A0A024R161 153 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 TMEM191CA6NGB0 347 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 ABLIM1O14639 778 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 B4GALT4O60513 344 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 IL18RAPO95256 599 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 HOXC6P09630 235 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 TXNP10599 105 aaKnown RBP11.74□□□□□ -0.53
CMSS1-208ENST00000496116 GJC1P36383 396 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 PIGHQ14442 188 aaPredicted RBP11.74□□□□□ -0.53
CMSS1-208ENST00000496116 ZNF394Q53GI3 561 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 LRRC38Q5VT99 294 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 EFCAB12Q6NXP0 572 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 THNSL1Q8IYQ7 743 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 CCHCR1Q8TD31 782 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 CLMNQ96JQ2 1002 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 FGD4Q96M96 766 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 HERPUD2Q9BSE4 406 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 CDC42EP4Q9H3Q1 356 aaKnown RBP11.74□□□□□ -0.53
CMSS1-208ENST00000496116 FZD8Q9H461 694 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 TXNRD2Q9NNW7 524 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 STRIP2Q9ULQ0 834 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 PCDHGC3Q9UN70 934 aa11.74□□□□□ -0.53
CMSS1-208ENST00000496116 ASB14A6NK59 587 aa11.73□□□□□ -0.53
CMSS1-208ENST00000496116 SMIM23A6NLE4 172 aa11.73□□□□□ -0.53
CMSS1-208ENST00000496116 TJP3O95049 919 aa11.73□□□□□ -0.53
CMSS1-208ENST00000496116 BRD2P25440 801 aaKnown RBP11.73□□□□□ -0.53
CMSS1-208ENST00000496116 ATP5DP30049 168 aa11.73□□□□□ -0.53
CMSS1-208ENST00000496116 POLR2BP30876 1174 aaKnown RBP11.73□□□□□ -0.53
CMSS1-208ENST00000496116 CDH5P33151 784 aaPredicted RBP11.73□□□□□ -0.53
CMSS1-208ENST00000496116 MMP13P45452 471 aa11.73□□□□□ -0.53
CMSS1-208ENST00000496116 ITGA8P53708 1063 aa11.73□□□□□ -0.53
CMSS1-208ENST00000496116 RPL7AP62424 266 aaKnown RBP11.73□□□□□ -0.53
CMSS1-208ENST00000496116 LACTBP83111 547 aaPredicted RBP11.73□□□□□ -0.53
CMSS1-208ENST00000496116 NFX1Q12986 1120 aaKnown RBP11.73□□□□□ -0.53
CMSS1-208ENST00000496116 Q3C1V9 767 aa11.73□□□□□ -0.53
CMSS1-208ENST00000496116 GPAT2Q6NUI2 795 aa11.73□□□□□ -0.53
CMSS1-208ENST00000496116 CCDC62Q6P9F0 684 aa11.73□□□□□ -0.53
CMSS1-208ENST00000496116 RHBDF2Q6PJF5 856 aa11.73□□□□□ -0.53
CMSS1-208ENST00000496116 CEP128Q6ZU80 1094 aa11.73□□□□□ -0.53
CMSS1-208ENST00000496116 YTHDF3Q7Z739 585 aaKnown RBP11.73□□□□□ -0.53
CMSS1-208ENST00000496116 ERICH1Q86X53 443 aa11.73□□□□□ -0.53
CMSS1-208ENST00000496116 MCEEQ96PE7 176 aa11.73□□□□□ -0.53
CMSS1-208ENST00000496116 SELENOSQ9BQE4 189 aa11.73□□□□□ -0.53
CMSS1-208ENST00000496116 RPF1Q9H9Y2 349 aaKnown RBP11.73□□□□□ -0.53
CMSS1-208ENST00000496116 LRRC4CQ9HCJ2 640 aa11.73□□□□□ -0.53
CMSS1-208ENST00000496116 PTPRHQ9HD43 1115 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms