RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 RFX1P22670 979 aa20.87■□□□□ 0.93
ATG3-208ENST00000495756 SMAD3P84022 425 aaKnown RBP20.87■□□□□ 0.93
ATG3-208ENST00000495756 ELAVL2Q12926 359 aaKnown RBP20.87■□□□□ 0.93
ATG3-208ENST00000495756 SOWAHAQ2M3V2 549 aa20.87■□□□□ 0.93
ATG3-208ENST00000495756 IQCEQ6IPM2 695 aa20.87■□□□□ 0.93
ATG3-208ENST00000495756 DPH6Q7L8W6 267 aa20.87■□□□□ 0.93
ATG3-208ENST00000495756 SPRED2Q7Z698 418 aa20.87■□□□□ 0.93
ATG3-208ENST00000495756 APPL2Q8NEU8 664 aa20.87■□□□□ 0.93
ATG3-208ENST00000495756 KAT5Q92993 513 aa20.87■□□□□ 0.93
ATG3-208ENST00000495756 FAM81BQ96LP2 452 aa20.87■□□□□ 0.93
ATG3-208ENST00000495756 KREMEN1Q96MU8 473 aa20.87■□□□□ 0.93
ATG3-208ENST00000495756 PLVAPQ9BX97 442 aa20.87■□□□□ 0.93
ATG3-208ENST00000495756 VN1R3Q9BXE9 311 aa20.87■□□□□ 0.93
ATG3-208ENST00000495756 NAA15Q9BXJ9 866 aaKnown RBP20.87■□□□□ 0.93
ATG3-208ENST00000495756 NKX2-4Q9H2Z4 354 aa20.87■□□□□ 0.93
ATG3-208ENST00000495756 CYP3A43Q9HB55 503 aa20.87■□□□□ 0.93
ATG3-208ENST00000495756 FBXL5Q9UKA1 691 aa20.87■□□□□ 0.93
ATG3-208ENST00000495756 DNAJC12Q9UKB3 198 aa20.87■□□□□ 0.93
ATG3-208ENST00000495756 AJAP1Q9UKB5 411 aaPredicted RBP20.87■□□□□ 0.93
ATG3-208ENST00000495756 PCDHB8Q9UN66 801 aa20.87■□□□□ 0.93
ATG3-208ENST00000495756 L1RE1Q9UN81 338 aa20.87■□□□□ 0.93
ATG3-208ENST00000495756 FHOD1Q9Y613 1164 aa20.87■□□□□ 0.93
ATG3-208ENST00000495756 ARHGEF37A1IGU5 675 aa20.86■□□□□ 0.93
ATG3-208ENST00000495756 FGF18O76093 207 aa20.86■□□□□ 0.93
ATG3-208ENST00000495756 WEE2P0C1S8 567 aa20.86■□□□□ 0.93
ATG3-208ENST00000495756 ODC1P11926 461 aa20.86■□□□□ 0.93
ATG3-208ENST00000495756 MFAP3P55082 362 aa20.86■□□□□ 0.93
ATG3-208ENST00000495756 POLR2FP61218 127 aaKnown RBP20.86■□□□□ 0.93
ATG3-208ENST00000495756 FIGNQ5HY92 759 aa20.86■□□□□ 0.93
ATG3-208ENST00000495756 PRPF38BQ5VTL8 546 aaKnown RBP20.86■□□□□ 0.93
ATG3-208ENST00000495756 FAM171A1Q5VUB5 890 aa20.86■□□□□ 0.93
ATG3-208ENST00000495756 ENOSF1Q7L5Y1 443 aa20.86■□□□□ 0.93
ATG3-208ENST00000495756 PDCL2Q8N4E4 241 aa20.86■□□□□ 0.93
ATG3-208ENST00000495756 KLHL23Q8NBE8 558 aa20.86■□□□□ 0.93
ATG3-208ENST00000495756 SAMD11Q96NU1 681 aa20.86■□□□□ 0.93
ATG3-208ENST00000495756 TGS1Q96RS0 853 aaKnown RBP20.86■□□□□ 0.93
ATG3-208ENST00000495756 NUP58Q9BVL2 599 aa20.86■□□□□ 0.93
ATG3-208ENST00000495756 SDCBP2Q9H190 292 aa20.86■□□□□ 0.93
ATG3-208ENST00000495756 DAAM1Q9Y4D1 1078 aa20.86■□□□□ 0.93
ATG3-208ENST00000495756 C5orf67F2Z3F1 127 aa20.85■□□□□ 0.93
ATG3-208ENST00000495756 DNAJB2P25686 324 aa20.85■□□□□ 0.93
ATG3-208ENST00000495756 CDC25BP30305 580 aa20.85■□□□□ 0.93
ATG3-208ENST00000495756 RAP1GAPP47736 663 aa20.85■□□□□ 0.93
ATG3-208ENST00000495756 CDH8P55286 799 aa20.85■□□□□ 0.93
ATG3-208ENST00000495756 ERVK-21P61565 698 aa20.85■□□□□ 0.93
ATG3-208ENST00000495756 PLCB3Q01970 1234 aa20.85■□□□□ 0.93
ATG3-208ENST00000495756 KRT17Q04695 432 aa20.85■□□□□ 0.93
ATG3-208ENST00000495756 WSCD1Q658N2 575 aa20.85■□□□□ 0.93
ATG3-208ENST00000495756 TMC6Q7Z403 805 aa20.85■□□□□ 0.93
ATG3-208ENST00000495756 DDX53Q86TM3 631 aaKnown RBP20.85■□□□□ 0.93
ATG3-208ENST00000495756 RNF168Q8IYW5 571 aaPredicted RBP20.85■□□□□ 0.93
ATG3-208ENST00000495756 JAKMIP2Q96AA8 810 aa20.85■□□□□ 0.93
ATG3-208ENST00000495756 TTYH3Q9C0H2 523 aa20.85■□□□□ 0.93
ATG3-208ENST00000495756 CEP72Q9P209 647 aa20.85■□□□□ 0.93
ATG3-208ENST00000495756 MTUS1Q9ULD2 1270 aa20.85■□□□□ 0.93
ATG3-208ENST00000495756 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.85■□□□□ 0.932e-7■■□□□ 13.2
ATG3-208ENST00000495756 TIMM13Q9Y5L4 95 aaPredicted RBP20.85■□□□□ 0.93
ATG3-208ENST00000495756 SYN3O14994 580 aa20.84■□□□□ 0.93
ATG3-208ENST00000495756 TACC1O75410 805 aa20.84■□□□□ 0.93
ATG3-208ENST00000495756 CYP11A1P05108 521 aa20.84■□□□□ 0.93
ATG3-208ENST00000495756 RB1P06400 928 aa20.84■□□□□ 0.93
ATG3-208ENST00000495756 TYMPP19971 482 aa20.84■□□□□ 0.93
ATG3-208ENST00000495756 TKTP29401 623 aaKnown RBP20.84■□□□□ 0.93
ATG3-208ENST00000495756 RAPGEF1Q13905 1077 aa20.84■□□□□ 0.93
ATG3-208ENST00000495756 LRIT3Q3SXY7 679 aa20.84■□□□□ 0.93
ATG3-208ENST00000495756 PPP2R2DQ66LE6 453 aa20.84■□□□□ 0.93
ATG3-208ENST00000495756 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.84■□□□□ 0.93
ATG3-208ENST00000495756 ADGRF2Q8IZF7 708 aa20.84■□□□□ 0.93
ATG3-208ENST00000495756 TMEM86AQ8N2M4 240 aa20.84■□□□□ 0.93
ATG3-208ENST00000495756 KBTBD7Q8WVZ9 684 aa20.84■□□□□ 0.93
ATG3-208ENST00000495756 IQCDQ96DY2 449 aa20.84■□□□□ 0.93
ATG3-208ENST00000495756 MRPL45Q9BRJ2 306 aaKnown RBP20.84■□□□□ 0.93
ATG3-208ENST00000495756 STK33Q9BYT3 514 aa20.84■□□□□ 0.93
ATG3-208ENST00000495756 FAM124BQ9H5Z6 455 aaPredicted RBP20.84■□□□□ 0.93
ATG3-208ENST00000495756 SLC28A3Q9HAS3 691 aa20.84■□□□□ 0.93
ATG3-208ENST00000495756 NLRC4Q9NPP4 1024 aa20.84■□□□□ 0.93
ATG3-208ENST00000495756 CISHQ9NSE2 258 aa20.84■□□□□ 0.93
ATG3-208ENST00000495756 DSEQ9UL01 958 aa20.84■□□□□ 0.93
ATG3-208ENST00000495756 TRANK1O15050 2925 aa20.84■□□□□ 0.93
ATG3-208ENST00000495756 TSC2P49815 1807 aa20.83■□□□□ 0.93
ATG3-208ENST00000495756 FAM163BP0C2L3 166 aa20.83■□□□□ 0.93
ATG3-208ENST00000495756 CD58P19256 250 aa20.83■□□□□ 0.93
ATG3-208ENST00000495756 FGFR3P22607 806 aa20.83■□□□□ 0.93
ATG3-208ENST00000495756 ARHGAP44Q17R89 818 aa20.83■□□□□ 0.93
ATG3-208ENST00000495756 TAS1R1Q7RTX1 841 aa20.83■□□□□ 0.93
ATG3-208ENST00000495756 CACNA2D4Q7Z3S7 1137 aa20.83■□□□□ 0.93
ATG3-208ENST00000495756 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.83■□□□□ 0.93
ATG3-208ENST00000495756 UBR7Q8N806 425 aa20.83■□□□□ 0.93
ATG3-208ENST00000495756 TIFAQ96CG3 184 aa20.83■□□□□ 0.93
ATG3-208ENST00000495756 B3GALT6Q96L58 329 aa20.83■□□□□ 0.93
ATG3-208ENST00000495756 EDEM3Q9BZQ6 932 aa20.83■□□□□ 0.93
ATG3-208ENST00000495756 STK39Q9UEW8 545 aa20.83■□□□□ 0.93
ATG3-208ENST00000495756 VWA8A3KMH1 1905 aa20.83■□□□□ 0.92
ATG3-208ENST00000495756 A0A1W2PQJ5 194 aa20.82■□□□□ 0.92
ATG3-208ENST00000495756 SOD2P04179 222 aa20.82■□□□□ 0.92
ATG3-208ENST00000495756 GYPCP04921 128 aa20.82■□□□□ 0.92
ATG3-208ENST00000495756 ACO1P21399 889 aaKnown RBP20.82■□□□□ 0.92
ATG3-208ENST00000495756 WARSP23381 471 aaKnown RBP20.82■□□□□ 0.92
ATG3-208ENST00000495756 YWHAEP62258 255 aaKnown RBP20.82■□□□□ 0.92
ATG3-208ENST00000495756 INCA1Q0VD86 236 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms