RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 LCHNA4D1U4 455 aa17.4■□□□□ 0.38
CBX4-204ENST00000495122 RFXAPO00287 272 aa17.4■□□□□ 0.38
CBX4-204ENST00000495122 ABLIM1O14639 778 aa17.4■□□□□ 0.38
CBX4-204ENST00000495122 CAND2O75155 1236 aa17.4■□□□□ 0.38
CBX4-204ENST00000495122 PNMA6AP0CW24 399 aaPredicted RBP17.4■□□□□ 0.38
CBX4-204ENST00000495122 INSRRP14616 1297 aa17.4■□□□□ 0.38
CBX4-204ENST00000495122 ZSCAN20P17040 1043 aaPredicted RBP17.4■□□□□ 0.38
CBX4-204ENST00000495122 POU3F3P20264 500 aaPredicted RBP17.4■□□□□ 0.38
CBX4-204ENST00000495122 IKBKEQ14164 716 aa17.4■□□□□ 0.38
CBX4-204ENST00000495122 CCDC85BQ15834 202 aaPredicted RBP17.4■□□□□ 0.38
CBX4-204ENST00000495122 MAP9Q49MG5 647 aa17.4■□□□□ 0.38
CBX4-204ENST00000495122 TJAP1Q5JTD0 557 aa17.4■□□□□ 0.38
CBX4-204ENST00000495122 ATF7IP2Q5U623 682 aa17.4■□□□□ 0.38
CBX4-204ENST00000495122 TDRD10Q5VZ19 366 aaKnown RBP17.4■□□□□ 0.38
CBX4-204ENST00000495122 C11orf63Q6NUN7 778 aa17.4■□□□□ 0.38
CBX4-204ENST00000495122 APBB1IPQ7Z5R6 666 aaPredicted RBP17.4■□□□□ 0.38
CBX4-204ENST00000495122 SPRED2Q7Z698 418 aa17.4■□□□□ 0.38
CBX4-204ENST00000495122 ZNF410Q86VK4 478 aa17.4■□□□□ 0.38
CBX4-204ENST00000495122 RHPN2Q8IUC4 686 aa17.4■□□□□ 0.38
CBX4-204ENST00000495122 ZNF516Q92618 1163 aa17.4■□□□□ 0.38
CBX4-204ENST00000495122 FAM124BQ9H5Z6 455 aaPredicted RBP17.4■□□□□ 0.38
CBX4-204ENST00000495122 CERS4Q9HA82 394 aa17.4■□□□□ 0.38
CBX4-204ENST00000495122 TOPORSQ9NS56 1045 aaPredicted RBP17.4■□□□□ 0.38
CBX4-204ENST00000495122 SETD4Q9NVD3 440 aa17.4■□□□□ 0.38
CBX4-204ENST00000495122 CPSF3Q9UKF6 684 aaKnown RBP17.4■□□□□ 0.38
CBX4-204ENST00000495122 CNTN6Q9UQ52 1028 aa17.4■□□□□ 0.38
CBX4-204ENST00000495122 PCDHB2Q9Y5E7 798 aa17.4■□□□□ 0.38
CBX4-204ENST00000495122 KIF4AO95239 1232 aa17.39■□□□□ 0.37
CBX4-204ENST00000495122 GJB5O95377 273 aa17.39■□□□□ 0.37
CBX4-204ENST00000495122 SRGAP2CP0DJJ0 459 aa17.39■□□□□ 0.37
CBX4-204ENST00000495122 MCF2P10911 925 aa17.39■□□□□ 0.37
CBX4-204ENST00000495122 GNAT1P11488 350 aa17.39■□□□□ 0.37
CBX4-204ENST00000495122 CYP11B1P15538 503 aa17.39■□□□□ 0.37
CBX4-204ENST00000495122 ACOT2P49753 483 aa17.39■□□□□ 0.37
CBX4-204ENST00000495122 GPC5P78333 572 aa17.39■□□□□ 0.37
CBX4-204ENST00000495122 MBTD1Q05BQ5 628 aa17.39■□□□□ 0.37
CBX4-204ENST00000495122 DRP2Q13474 957 aa17.39■□□□□ 0.37
CBX4-204ENST00000495122 BIRC3Q13489 604 aa17.39■□□□□ 0.37
CBX4-204ENST00000495122 PLEKHG4Q58EX7 1191 aa17.39■□□□□ 0.37
CBX4-204ENST00000495122 GPIHBP1Q8IV16 184 aa17.39■□□□□ 0.37
CBX4-204ENST00000495122 LRRC71Q8N4P6 559 aa17.39■□□□□ 0.37
CBX4-204ENST00000495122 ZBTB45Q96K62 511 aaPredicted RBP17.39■□□□□ 0.37
CBX4-204ENST00000495122 POP1Q99575 1024 aaKnown RBP17.39■□□□□ 0.37
CBX4-204ENST00000495122 TCHPQ9BT92 498 aa17.39■□□□□ 0.37
CBX4-204ENST00000495122 PDE11AQ9HCR9 933 aa17.39■□□□□ 0.37
CBX4-204ENST00000495122 OGFRQ9NZT2 677 aa17.39■□□□□ 0.37
CBX4-204ENST00000495122 MIF4GDA9UHW6 222 aaKnown RBP17.38■□□□□ 0.37
CBX4-204ENST00000495122 SRGAP2O75044 1071 aa17.38■□□□□ 0.37
CBX4-204ENST00000495122 ZRANB2O95218 330 aaKnown RBP eCLIP17.38■□□□□ 0.37
CBX4-204ENST00000495122 MYBL1P10243 752 aa17.38■□□□□ 0.37
CBX4-204ENST00000495122 YWHAEP62258 255 aaKnown RBP17.38■□□□□ 0.37
CBX4-204ENST00000495122 CUL2Q13617 745 aa17.38■□□□□ 0.37
CBX4-204ENST00000495122 DUOXA2Q1HG44 320 aa17.38■□□□□ 0.37
CBX4-204ENST00000495122 CC2D1AQ6P1N0 951 aaPredicted RBP17.38■□□□□ 0.37
CBX4-204ENST00000495122 PEX26Q7Z412 305 aa17.38■□□□□ 0.37
CBX4-204ENST00000495122 NOP9Q86U38 636 aaKnown RBP17.38■□□□□ 0.37
CBX4-204ENST00000495122 SPATA4Q8NEY3 305 aa17.38■□□□□ 0.37
CBX4-204ENST00000495122 DBF4BQ8NFT6 615 aa17.38■□□□□ 0.37
CBX4-204ENST00000495122 ATXN2LQ8WWM7 1075 aaKnown RBP17.38■□□□□ 0.37
CBX4-204ENST00000495122 ARNTL2Q8WYA1 636 aa17.38■□□□□ 0.37
CBX4-204ENST00000495122 CAPZA3Q96KX2 299 aa17.38■□□□□ 0.37
CBX4-204ENST00000495122 OSBPL7Q9BZF2 842 aa17.38■□□□□ 0.37
CBX4-204ENST00000495122 ABCB6Q9NP58 842 aa17.38■□□□□ 0.37
CBX4-204ENST00000495122 UVRAGQ9P2Y5 699 aa17.38■□□□□ 0.37
CBX4-204ENST00000495122 GTF3C4Q9UKN8 822 aa17.38■□□□□ 0.37
CBX4-204ENST00000495122 AMFRQ9UKV5 643 aa17.38■□□□□ 0.37
CBX4-204ENST00000495122 MTCH2Q9Y6C9 303 aa17.38■□□□□ 0.37
CBX4-204ENST00000495122 NRCAMQ92823 1304 aa17.38■□□□□ 0.37
CBX4-204ENST00000495122 PLXNA4Q9HCM2 1894 aa17.37■□□□□ 0.37
CBX4-204ENST00000495122 INO80B-WBP1J3KQ70 363 aa17.37■□□□□ 0.37
CBX4-204ENST00000495122 CYP26A1O43174 497 aa17.37■□□□□ 0.37
CBX4-204ENST00000495122 PHACTR2O75167 634 aa17.37■□□□□ 0.37
CBX4-204ENST00000495122 VNN1O95497 513 aa17.37■□□□□ 0.37
CBX4-204ENST00000495122 EDN1P05305 212 aa17.37■□□□□ 0.37
CBX4-204ENST00000495122 CLTAP09496 248 aa17.37■□□□□ 0.37
CBX4-204ENST00000495122 CTSHP09668 335 aa17.37■□□□□ 0.37
CBX4-204ENST00000495122 CHRNB2P17787 502 aa17.37■□□□□ 0.37
CBX4-204ENST00000495122 USP8P40818 1118 aa17.37■□□□□ 0.37
CBX4-204ENST00000495122 FMO1Q01740 532 aa17.37■□□□□ 0.37
CBX4-204ENST00000495122 PPFIA1Q13136 1202 aa17.37■□□□□ 0.37
CBX4-204ENST00000495122 FAM26DQ5JW98 314 aa17.37■□□□□ 0.37
CBX4-204ENST00000495122 MTHFD1LQ6UB35 978 aa17.37■□□□□ 0.37
CBX4-204ENST00000495122 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.37■□□□□ 0.37
CBX4-204ENST00000495122 NT5DC4Q86YG4 428 aa17.37■□□□□ 0.37
CBX4-204ENST00000495122 MICALL1Q8N3F8 863 aa17.37■□□□□ 0.37
CBX4-204ENST00000495122 METTL13Q8N6R0 699 aa17.37■□□□□ 0.37
CBX4-204ENST00000495122 NOA1Q8NC60 698 aaKnown RBP17.37■□□□□ 0.37
CBX4-204ENST00000495122 SLC35G2Q8TBE7 412 aa17.37■□□□□ 0.37
CBX4-204ENST00000495122 ACTRT1Q8TDG2 376 aa17.37■□□□□ 0.37
CBX4-204ENST00000495122 SLC20A1Q8WUM9 679 aa17.37■□□□□ 0.37
CBX4-204ENST00000495122 HES6Q96HZ4 224 aa17.37■□□□□ 0.37
CBX4-204ENST00000495122 RPS6KC1Q96S38 1066 aa17.37■□□□□ 0.37
CBX4-204ENST00000495122 RAD9AQ99638 391 aa17.37■□□□□ 0.37
CBX4-204ENST00000495122 ZBED2Q9BTP6 218 aa17.37■□□□□ 0.37
CBX4-204ENST00000495122 INO80BQ9C086 356 aaPredicted RBP17.37■□□□□ 0.37
CBX4-204ENST00000495122 SEPT11Q9NVA2 429 aaKnown RBP17.37■□□□□ 0.37
CBX4-204ENST00000495122 TTC7AQ9ULT0 858 aaPredicted RBP17.37■□□□□ 0.37
CBX4-204ENST00000495122 FTCDO95954 541 aa17.36■□□□□ 0.37
CBX4-204ENST00000495122 ASS1P00966 412 aaKnown RBP17.36■□□□□ 0.37
CBX4-204ENST00000495122 TNNC2P02585 160 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms