RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 ZNF564Q8TBZ8 553 aaPredicted RBP16.65■□□□□ 0.26
SHISA5-216ENST00000494854 RNPC3Q96LT9 517 aaKnown RBP16.65■□□□□ 0.26
SHISA5-216ENST00000494854 C16orf70Q9BSU1 422 aa16.65■□□□□ 0.26
SHISA5-216ENST00000494854 AP1M1Q9BXS5 423 aa16.65■□□□□ 0.26
SHISA5-216ENST00000494854 FZD8Q9H461 694 aa16.65■□□□□ 0.26
SHISA5-216ENST00000494854 CHORDC1Q9UHD1 332 aaPredicted RBP16.65■□□□□ 0.26
SHISA5-216ENST00000494854 HPCAL4Q9UM19 191 aa16.65■□□□□ 0.26
SHISA5-216ENST00000494854 UMODL1Q5DID0 1318 aa16.65■□□□□ 0.26
SHISA5-216ENST00000494854 MIF4GDA9UHW6 222 aaKnown RBP16.64■□□□□ 0.26
SHISA5-216ENST00000494854 KRIT1O00522 736 aa16.64■□□□□ 0.26
SHISA5-216ENST00000494854 PITPNM1O00562 1244 aa16.64■□□□□ 0.26
SHISA5-216ENST00000494854 ACKR2O00590 384 aa16.64■□□□□ 0.26
SHISA5-216ENST00000494854 POLR3GO15318 223 aaPredicted RBP16.64■□□□□ 0.26
SHISA5-216ENST00000494854 C22orf31O95567 290 aa16.64■□□□□ 0.26
SHISA5-216ENST00000494854 CYP2C9P11712 490 aa16.64■□□□□ 0.26
SHISA5-216ENST00000494854 PROZP22891 400 aa16.64■□□□□ 0.26
SHISA5-216ENST00000494854 TBXAS1P24557 533 aaPredicted RBP16.64■□□□□ 0.26
SHISA5-216ENST00000494854 NOP14P78316 857 aaKnown RBP16.64■□□□□ 0.26
SHISA5-216ENST00000494854 SMAD3P84022 425 aaKnown RBP16.64■□□□□ 0.26
SHISA5-216ENST00000494854 GUCY2DQ02846 1103 aa16.64■□□□□ 0.26
SHISA5-216ENST00000494854 MFSD10Q14728 455 aa16.64■□□□□ 0.26
SHISA5-216ENST00000494854 RASIP1Q5U651 963 aa16.64■□□□□ 0.26
SHISA5-216ENST00000494854 TSHZ1Q6ZSZ6 1077 aa16.64■□□□□ 0.26
SHISA5-216ENST00000494854 ZBTB10Q96DT7 871 aa16.64■□□□□ 0.26
SHISA5-216ENST00000494854 ZNF668Q96K58 619 aaPredicted RBP16.64■□□□□ 0.26
SHISA5-216ENST00000494854 NUP85Q9BW27 656 aa16.64■□□□□ 0.26
SHISA5-216ENST00000494854 WNT8AQ9H1J5 351 aa16.64■□□□□ 0.26
SHISA5-216ENST00000494854 EPB41L5Q9HCM4 733 aa16.64■□□□□ 0.26
SHISA5-216ENST00000494854 UVRAGQ9P2Y5 699 aa16.64■□□□□ 0.26
SHISA5-216ENST00000494854 GTF2IRD1Q9UHL9 959 aa16.64■□□□□ 0.26
SHISA5-216ENST00000494854 CPSF3Q9UKF6 684 aaKnown RBP16.64■□□□□ 0.26
SHISA5-216ENST00000494854 KAT6AQ92794 2004 aa16.64■□□□□ 0.25
SHISA5-216ENST00000494854 TMEM110-MUSTN1A8MSY1 372 aa16.64■□□□□ 0.25
SHISA5-216ENST00000494854 INO80B-WBP1J3KQ70 363 aa16.64■□□□□ 0.25
SHISA5-216ENST00000494854 CLSTN1O94985 981 aa16.64■□□□□ 0.25
SHISA5-216ENST00000494854 UNGP13051 313 aaPredicted RBP16.64■□□□□ 0.25
SHISA5-216ENST00000494854 INSRRP14616 1297 aa16.64■□□□□ 0.25
SHISA5-216ENST00000494854 PTENP60484 403 aa16.64■□□□□ 0.25
SHISA5-216ENST00000494854 IGBP1P78318 339 aa16.64■□□□□ 0.25
SHISA5-216ENST00000494854 MESDQ14696 234 aa16.64■□□□□ 0.25
SHISA5-216ENST00000494854 SURF1Q15526 300 aa16.64■□□□□ 0.25
SHISA5-216ENST00000494854 TERF2Q15554 542 aa16.64■□□□□ 0.25
SHISA5-216ENST00000494854 PTGISQ16647 500 aa16.64■□□□□ 0.25
SHISA5-216ENST00000494854 EMBQ6PCB8 327 aa16.64■□□□□ 0.25
SHISA5-216ENST00000494854 MPZL3Q6UWV2 235 aa16.64■□□□□ 0.25
SHISA5-216ENST00000494854 C7orf31Q8N865 590 aa16.64■□□□□ 0.25
SHISA5-216ENST00000494854 RPS6KC1Q96S38 1066 aa16.64■□□□□ 0.25
SHISA5-216ENST00000494854 INO80BQ9C086 356 aaPredicted RBP16.64■□□□□ 0.25
SHISA5-216ENST00000494854 PTPRHQ9HD43 1115 aa16.64■□□□□ 0.25
SHISA5-216ENST00000494854 NUB1Q9Y5A7 615 aa16.64■□□□□ 0.25
SHISA5-216ENST00000494854 TRIP12Q14669 1992 aaPredicted RBP16.63■□□□□ 0.25
SHISA5-216ENST00000494854 LAMA2P24043 3122 aaKnown RBP16.63■□□□□ 0.25
SHISA5-216ENST00000494854 ZSCAN5CA6NGD5 496 aaPredicted RBP16.63■□□□□ 0.25
SHISA5-216ENST00000494854 FGGP02679 453 aa16.63■□□□□ 0.25
SHISA5-216ENST00000494854 ZNF286BP0CG31 522 aa16.63■□□□□ 0.25
SHISA5-216ENST00000494854 CCL23P55773 120 aa16.63■□□□□ 0.25
SHISA5-216ENST00000494854 MBTD1Q05BQ5 628 aa16.63■□□□□ 0.25
SHISA5-216ENST00000494854 ATF7IP2Q5U623 682 aa16.63■□□□□ 0.25
SHISA5-216ENST00000494854 GDF6Q6KF10 455 aaPredicted RBP16.63■□□□□ 0.25
SHISA5-216ENST00000494854 SND1Q7KZF4 910 aaKnown RBP eCLIP16.63■□□□□ 0.252e-8■■□□□ 11.7
SHISA5-216ENST00000494854 UBL4BQ8N7F7 174 aa16.63■□□□□ 0.25
SHISA5-216ENST00000494854 UBE2Q2Q8WVN8 375 aa16.63■□□□□ 0.25
SHISA5-216ENST00000494854 IMPG2Q9BZV3 1241 aa16.63■□□□□ 0.25
SHISA5-216ENST00000494854 PLEKHA4Q9H4M7 779 aa16.63■□□□□ 0.25
SHISA5-216ENST00000494854 NOD1Q9Y239 953 aa16.63■□□□□ 0.25
SHISA5-216ENST00000494854 PCDHB4Q9Y5E5 795 aa16.63■□□□□ 0.25
SHISA5-216ENST00000494854 H3BRB1 525 aa16.62■□□□□ 0.25
SHISA5-216ENST00000494854 SART1O43290 800 aaKnown RBP16.62■□□□□ 0.25
SHISA5-216ENST00000494854 COMTP21964 271 aa16.62■□□□□ 0.25
SHISA5-216ENST00000494854 RFC2P35250 354 aa16.62■□□□□ 0.25
SHISA5-216ENST00000494854 CARSP49589 748 aaKnown RBP16.62■□□□□ 0.25
SHISA5-216ENST00000494854 BFSP2Q13515 415 aa16.62■□□□□ 0.25
SHISA5-216ENST00000494854 ZNF568Q3ZCX4 644 aa16.62■□□□□ 0.25
SHISA5-216ENST00000494854 TMEM270Q6UE05 265 aa16.62■□□□□ 0.25
SHISA5-216ENST00000494854 ZNF365Q70YC5 407 aa16.62■□□□□ 0.25
SHISA5-216ENST00000494854 PPP1R13LQ8WUF5 828 aa16.62■□□□□ 0.25
SHISA5-216ENST00000494854 ALG3Q92685 438 aa16.62■□□□□ 0.25
SHISA5-216ENST00000494854 FAM212AQ96EL1 285 aa16.62■□□□□ 0.25
SHISA5-216ENST00000494854 NFKBIZQ9BYH8 718 aa16.62■□□□□ 0.25
SHISA5-216ENST00000494854 MTMR12Q9C0I1 747 aa16.62■□□□□ 0.25
SHISA5-216ENST00000494854 DDX47Q9H0S4 455 aaKnown RBP16.62■□□□□ 0.25
SHISA5-216ENST00000494854 TUT1Q9H6E5 874 aaKnown RBP16.62■□□□□ 0.25
SHISA5-216ENST00000494854 CNOT8Q9UFF9 292 aaKnown RBP16.62■□□□□ 0.25
SHISA5-216ENST00000494854 CNTN6Q9UQ52 1028 aa16.62■□□□□ 0.25
SHISA5-216ENST00000494854 ESYT3A0FGR9 886 aa16.62■□□□□ 0.25
SHISA5-216ENST00000494854 B4GALT5O43286 388 aa16.62■□□□□ 0.25
SHISA5-216ENST00000494854 CST3P01034 146 aaPredicted RBP16.62■□□□□ 0.25
SHISA5-216ENST00000494854 PFKMP08237 780 aa16.62■□□□□ 0.25
SHISA5-216ENST00000494854 ITGA4P13612 1032 aa16.62■□□□□ 0.25
SHISA5-216ENST00000494854 AARSP49588 968 aaKnown RBP eCLIP16.62■□□□□ 0.25
SHISA5-216ENST00000494854 DUOXA2Q1HG44 320 aa16.62■□□□□ 0.25
SHISA5-216ENST00000494854 TMEM132AQ24JP5 1023 aa16.62■□□□□ 0.25
SHISA5-216ENST00000494854 HSP90B2PQ58FF3 399 aa16.62■□□□□ 0.25
SHISA5-216ENST00000494854 CASKIN2Q8WXE0 1202 aa16.62■□□□□ 0.25
SHISA5-216ENST00000494854 HERVK_113Q902F9 699 aa16.62■□□□□ 0.25
SHISA5-216ENST00000494854 CAVIN3Q969G5 261 aa16.62■□□□□ 0.25
SHISA5-216ENST00000494854 ZBTB9Q96C00 473 aa16.62■□□□□ 0.25
SHISA5-216ENST00000494854 BTBD6Q96KE9 485 aa16.62■□□□□ 0.25
SHISA5-216ENST00000494854 NAP1L3Q99457 506 aaPredicted RBP16.62■□□□□ 0.25
SHISA5-216ENST00000494854 ZSWIM1Q9BR11 485 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms