RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 KPNB1Q14974 876 aaKnown RBP16.24■□□□□ 0.19
SDF4-207ENST00000494748 RBBP5Q15291 538 aaKnown RBP16.24■□□□□ 0.19
SDF4-207ENST00000494748 HAUS6Q7Z4H7 955 aa16.24■□□□□ 0.19
SDF4-207ENST00000494748 GATA6Q92908 595 aa16.24■□□□□ 0.19
SDF4-207ENST00000494748 SKA1Q96BD8 255 aa16.24■□□□□ 0.19
SDF4-207ENST00000494748 BTBD10Q9BSF8 475 aa16.24■□□□□ 0.19
SDF4-207ENST00000494748 DHRS4Q9BTZ2 278 aa16.24■□□□□ 0.19
SDF4-207ENST00000494748 C12orf65Q9H3J6 166 aaKnown RBP16.24■□□□□ 0.19
SDF4-207ENST00000494748 TMEM8AQ9HCN3 771 aa16.24■□□□□ 0.19
SDF4-207ENST00000494748 ARHGEF4Q9NR80 690 aa16.24■□□□□ 0.19
SDF4-207ENST00000494748 CCNL1Q9UK58 526 aaPredicted RBP16.24■□□□□ 0.19
SDF4-207ENST00000494748 CLUHO75153 1309 aa16.24■□□□□ 0.19
SDF4-207ENST00000494748 ALOX15BO15296 676 aa16.23■□□□□ 0.19
SDF4-207ENST00000494748 CFBP00751 764 aa16.23■□□□□ 0.19
SDF4-207ENST00000494748 SPP2Q13103 211 aa16.23■□□□□ 0.19
SDF4-207ENST00000494748 EFTUD2Q15029 972 aaKnown RBP eCLIP16.23■□□□□ 0.193e-6■□□□□ 10.7
SDF4-207ENST00000494748 MUM1Q2TAK8 710 aa16.23■□□□□ 0.19
SDF4-207ENST00000494748 EFHC2Q5JST6 749 aa16.23■□□□□ 0.19
SDF4-207ENST00000494748 TMEM179Q6ZVK1 233 aa16.23■□□□□ 0.19
SDF4-207ENST00000494748 SCG3Q8WXD2 468 aaKnown RBP16.23■□□□□ 0.19
SDF4-207ENST00000494748 FAM84AQ96KN4 292 aa16.23■□□□□ 0.19
SDF4-207ENST00000494748 TTC25Q96NG3 672 aa16.23■□□□□ 0.19
SDF4-207ENST00000494748 LARSQ9P2J5 1176 aaKnown RBP16.23■□□□□ 0.19
SDF4-207ENST00000494748 STOML1Q9UBI4 398 aa16.23■□□□□ 0.19
SDF4-207ENST00000494748 GSTTP1A0A1W2PQM5 241 aa16.23■□□□□ 0.19
SDF4-207ENST00000494748 ZBED4O75132 1171 aa16.23■□□□□ 0.19
SDF4-207ENST00000494748 BANF1O75531 89 aa16.23■□□□□ 0.19
SDF4-207ENST00000494748 CD58P19256 250 aa16.23■□□□□ 0.19
SDF4-207ENST00000494748 RARRES1P49788 294 aa16.23■□□□□ 0.19
SDF4-207ENST00000494748 NCKAP1LP55160 1127 aa16.23■□□□□ 0.19
SDF4-207ENST00000494748 RNASEH2BQ5TBB1 312 aaKnown RBP16.23■□□□□ 0.19
SDF4-207ENST00000494748 RINLQ6ZS11 566 aa16.23■□□□□ 0.19
SDF4-207ENST00000494748 KIFAP3Q92845 792 aa16.23■□□□□ 0.19
SDF4-207ENST00000494748 HNRNPCL1O60812 293 aaKnown RBP16.23■□□□□ 0.19
SDF4-207ENST00000494748 TCF4P15884 667 aa16.23■□□□□ 0.19
SDF4-207ENST00000494748 KRT15P19012 456 aa16.23■□□□□ 0.19
SDF4-207ENST00000494748 TBC1D10BQ4KMP7 808 aaPredicted RBP16.23■□□□□ 0.19
SDF4-207ENST00000494748 KRT82Q9NSB4 513 aa16.23■□□□□ 0.19
SDF4-207ENST00000494748 RAB20Q9NX57 234 aa16.23■□□□□ 0.19
SDF4-207ENST00000494748 RTN3O95197 1032 aaPredicted RBP16.22■□□□□ 0.19
SDF4-207ENST00000494748 DSG3P32926 999 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 SESN3P58005 492 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 OVGP1Q12889 678 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 ZC3H12AQ5D1E8 599 aaKnown RBP16.22■□□□□ 0.19
SDF4-207ENST00000494748 SLC39A4Q6P5W5 647 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 ALLCQ8N6M5 410 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 EXD1Q8NHP7 514 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 CCDC127Q96BQ5 260 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 NT5C1BQ96P26 610 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 PI4K2AQ9BTU6 479 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 SLC24A2Q9UI40 661 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 RABGEF1Q9UJ41 708 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 TMEM150BA6NC51 233 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 IPO5O00410 1097 aaKnown RBP16.22■□□□□ 0.19
SDF4-207ENST00000494748 DHX15O43143 795 aaKnown RBP16.22■□□□□ 0.19
SDF4-207ENST00000494748 ATP9AO75110 1047 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 KRT4P19013 534 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 IKQ13123 557 aaPredicted RBP16.22■□□□□ 0.19
SDF4-207ENST00000494748 WDR72Q3MJ13 1102 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 DRICH1Q6PGQ1 229 aaPredicted RBP16.22■□□□□ 0.19
SDF4-207ENST00000494748 LRRC74BQ6ZQY2 392 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 FBXL13Q8NEE6 735 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 FAM81BQ96LP2 452 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 TEKT3Q9BXF9 490 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 GPRC5CQ9NQ84 441 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 ZHX2Q9Y6X8 837 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 SLC16A4O15374 487 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 DNAJC6O75061 913 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 PSMG1O95456 288 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 RPS6KA3P51812 740 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 GAD2Q05329 585 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 ATP13A4Q4VNC1 1196 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 CAPN12Q6ZSI9 719 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 RHOT1Q8IXI2 618 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 TEKT1Q969V4 418 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 MFSD14AQ96MC6 490 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 SH2D3AQ9BRG2 576 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 METTL5Q9NRN9 209 aaKnown RBP16.22■□□□□ 0.19
SDF4-207ENST00000494748 ANKFY1Q9P2R3 1169 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 PSMC3IPQ9P2W1 217 aaPredicted RBP16.22■□□□□ 0.19
SDF4-207ENST00000494748 PI4KBQ9UBF8 816 aa16.22■□□□□ 0.19
SDF4-207ENST00000494748 CCDC22O60826 627 aa16.21■□□□□ 0.19
SDF4-207ENST00000494748 ZWINTO95229 277 aa16.21■□□□□ 0.19
SDF4-207ENST00000494748 ITGB5P18084 799 aa16.21■□□□□ 0.19
SDF4-207ENST00000494748 CRKP46108 304 aa16.21■□□□□ 0.19
SDF4-207ENST00000494748 SNRPFP62306 86 aaKnown RBP16.21■□□□□ 0.19
SDF4-207ENST00000494748 RCN2Q14257 317 aa16.21■□□□□ 0.19
SDF4-207ENST00000494748 POMGNT1Q8WZA1 660 aa16.21■□□□□ 0.19
SDF4-207ENST00000494748 KLHL11Q9NVR0 708 aa16.21■□□□□ 0.19
SDF4-207ENST00000494748 SLC17A7Q9P2U7 560 aa16.21■□□□□ 0.19
SDF4-207ENST00000494748 DCTN4Q9UJW0 460 aa16.21■□□□□ 0.19
SDF4-207ENST00000494748 KRT10P13645 584 aa16.21■□□□□ 0.19
SDF4-207ENST00000494748 SLC34A1Q06495 639 aa16.21■□□□□ 0.19
SDF4-207ENST00000494748 MAMLD1Q13495 774 aa16.21■□□□□ 0.19
SDF4-207ENST00000494748 FAM98CQ17RN3 349 aaKnown RBP16.21■□□□□ 0.19
SDF4-207ENST00000494748 SLC5A9Q2M3M2 681 aa16.21■□□□□ 0.19
SDF4-207ENST00000494748 TRAPPC3LQ5T215 181 aa16.21■□□□□ 0.19
SDF4-207ENST00000494748 HHATQ5VTY9 493 aa16.21■□□□□ 0.19
SDF4-207ENST00000494748 SV2AQ7L0J3 742 aa16.21■□□□□ 0.19
SDF4-207ENST00000494748 NLRX1Q86UT6 975 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms