RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 STXBP5Q5T5C0 1151 aa12.63□□□□□ -0.39
VTI1A-208ENST00000494728 ADALQ6DHV7 355 aa12.63□□□□□ -0.39
VTI1A-208ENST00000494728 OVOS1Q6IE37 1185 aa12.63□□□□□ -0.39
VTI1A-208ENST00000494728 MAML2Q8IZL2 1156 aaPredicted RBP12.63□□□□□ -0.39
VTI1A-208ENST00000494728 GLIS3Q8NEA6 775 aa12.63□□□□□ -0.39
VTI1A-208ENST00000494728 RSPRY1Q96DX4 576 aa12.63□□□□□ -0.39
VTI1A-208ENST00000494728 SENP8Q96LD8 212 aa12.63□□□□□ -0.39
VTI1A-208ENST00000494728 PANK2Q9BZ23 570 aa12.63□□□□□ -0.39
VTI1A-208ENST00000494728 AGO2Q9UKV8 859 aaKnown RBP12.63□□□□□ -0.39
VTI1A-208ENST00000494728 SIT1Q9Y3P8 196 aa12.63□□□□□ -0.39
VTI1A-208ENST00000494728 FRMD3A2A2Y4 597 aa12.62□□□□□ -0.39
VTI1A-208ENST00000494728 K7ELQ4 463 aaPredicted RBP12.62□□□□□ -0.39
VTI1A-208ENST00000494728 ECI2O75521 394 aa12.62□□□□□ -0.39
VTI1A-208ENST00000494728 MYL4P12829 197 aa12.62□□□□□ -0.39
VTI1A-208ENST00000494728 RFX1P22670 979 aa12.62□□□□□ -0.39
VTI1A-208ENST00000494728 VIPR2P41587 438 aa12.62□□□□□ -0.39
VTI1A-208ENST00000494728 DUSP4Q13115 394 aa12.62□□□□□ -0.39
VTI1A-208ENST00000494728 SLC39A14Q15043 492 aa12.62□□□□□ -0.39
VTI1A-208ENST00000494728 TEAD2Q15562 447 aa12.62□□□□□ -0.39
VTI1A-208ENST00000494728 RRAGBQ5VZM2 374 aa12.62□□□□□ -0.39
VTI1A-208ENST00000494728 DSTYKQ6XUX3 929 aa12.62□□□□□ -0.39
VTI1A-208ENST00000494728 PDZD4Q76G19 769 aaPredicted RBP12.62□□□□□ -0.39
VTI1A-208ENST00000494728 KRI1Q8N9T8 703 aaKnown RBP12.62□□□□□ -0.39
VTI1A-208ENST00000494728 ATAD1Q8NBU5 361 aa12.62□□□□□ -0.39
VTI1A-208ENST00000494728 SHKBP1Q8TBC3 707 aa12.62□□□□□ -0.39
VTI1A-208ENST00000494728 SAAL1Q96ER3 474 aa12.62□□□□□ -0.39
VTI1A-208ENST00000494728 INTS4Q96HW7 963 aaKnown RBP12.62□□□□□ -0.39
VTI1A-208ENST00000494728 ASB16Q96NS5 453 aa12.62□□□□□ -0.39
VTI1A-208ENST00000494728 IRF2BPLQ9H1B7 796 aa12.62□□□□□ -0.39
VTI1A-208ENST00000494728 ZNF334Q9HCZ1 680 aaPredicted RBP12.62□□□□□ -0.39
VTI1A-208ENST00000494728 HEBP1Q9NRV9 189 aa12.62□□□□□ -0.39
VTI1A-208ENST00000494728 GDE1Q9NZC3 331 aa12.62□□□□□ -0.39
VTI1A-208ENST00000494728 SLC27A5Q9Y2P5 690 aa12.62□□□□□ -0.39
VTI1A-208ENST00000494728 R4GN57 208 aa12.62□□□□□ -0.39
VTI1A-208ENST00000494728 HELZP42694 1942 aaKnown RBP12.62□□□□□ -0.39
VTI1A-208ENST00000494728 LAMA1P25391 3075 aa12.62□□□□□ -0.39
VTI1A-208ENST00000494728 MYO16Q9Y6X6 1858 aa12.61□□□□□ -0.39
VTI1A-208ENST00000494728 STX6O43752 255 aa12.61□□□□□ -0.39
VTI1A-208ENST00000494728 ATF6P18850 670 aa12.61□□□□□ -0.39
VTI1A-208ENST00000494728 TYMPP19971 482 aa12.61□□□□□ -0.39
VTI1A-208ENST00000494728 SCP2P22307 547 aa12.61□□□□□ -0.39
VTI1A-208ENST00000494728 TARSP26639 723 aaKnown RBP12.61□□□□□ -0.39
VTI1A-208ENST00000494728 NASPP49321 788 aaPredicted RBP12.61□□□□□ -0.39
VTI1A-208ENST00000494728 GPR17Q13304 367 aa12.61□□□□□ -0.39
VTI1A-208ENST00000494728 E2F4Q16254 413 aa12.61□□□□□ -0.39
VTI1A-208ENST00000494728 KYAT1Q16773 422 aa12.61□□□□□ -0.39
VTI1A-208ENST00000494728 CCDC142Q17RM4 750 aa12.61□□□□□ -0.39
VTI1A-208ENST00000494728 SLC44A4Q53GD3 710 aa12.61□□□□□ -0.39
VTI1A-208ENST00000494728 L1TD1Q5T7N2 865 aaKnown RBP12.61□□□□□ -0.39
VTI1A-208ENST00000494728 CENPPQ6IPU0 288 aa12.61□□□□□ -0.39
VTI1A-208ENST00000494728 VITQ6UXI7 678 aa12.61□□□□□ -0.39
VTI1A-208ENST00000494728 TPRG1Q6ZUI0 275 aa12.61□□□□□ -0.39
VTI1A-208ENST00000494728 PDILTQ8N807 584 aa12.61□□□□□ -0.39
VTI1A-208ENST00000494728 POMGNT1Q8WZA1 660 aa12.61□□□□□ -0.39
VTI1A-208ENST00000494728 HPS3Q969F9 1004 aa12.61□□□□□ -0.39
VTI1A-208ENST00000494728 ELSPBP1Q96BH3 223 aa12.61□□□□□ -0.39
VTI1A-208ENST00000494728 BORCS6Q96GS4 357 aa12.61□□□□□ -0.39
VTI1A-208ENST00000494728 CBWD1Q9BRT8 395 aa12.61□□□□□ -0.39
VTI1A-208ENST00000494728 MKNK1Q9BUB5 465 aa12.61□□□□□ -0.39
VTI1A-208ENST00000494728 MRPL44Q9H9J2 332 aaKnown RBP12.61□□□□□ -0.39
VTI1A-208ENST00000494728 ASAH2Q9NR71 780 aa12.61□□□□□ -0.39
VTI1A-208ENST00000494728 OLFML3Q9NRN5 406 aa12.61□□□□□ -0.39
VTI1A-208ENST00000494728 CCDC39Q9UFE4 941 aa12.61□□□□□ -0.39
VTI1A-208ENST00000494728 C2CD2Q9Y426 696 aa12.61□□□□□ -0.39
VTI1A-208ENST00000494728 MORC2Q9Y6X9 1032 aaPredicted RBP12.61□□□□□ -0.39
VTI1A-208ENST00000494728 PTPRJQ12913 1337 aa12.61□□□□□ -0.39
VTI1A-208ENST00000494728 SPTBN2O15020 2390 aa12.61□□□□□ -0.39
VTI1A-208ENST00000494728 NCOR2Q9Y618 2525 aa12.6□□□□□ -0.39
VTI1A-208ENST00000494728 KIAA1549LQ6ZVL6 1849 aa12.6□□□□□ -0.39
VTI1A-208ENST00000494728 ATG2BQ96BY7 2078 aa12.6□□□□□ -0.39
VTI1A-208ENST00000494728 A0A1W2PRU2 124 aa12.6□□□□□ -0.39
VTI1A-208ENST00000494728 KANSL1LA0AUZ9 987 aa12.6□□□□□ -0.39
VTI1A-208ENST00000494728 OR6C75A6NL08 312 aa12.6□□□□□ -0.39
VTI1A-208ENST00000494728 XPOTO43592 962 aaKnown RBP12.6□□□□□ -0.39
VTI1A-208ENST00000494728 GCNT3O95395 438 aa12.6□□□□□ -0.39
VTI1A-208ENST00000494728 CYP11A1P05108 521 aa12.6□□□□□ -0.39
VTI1A-208ENST00000494728 ODC1P11926 461 aa12.6□□□□□ -0.39
VTI1A-208ENST00000494728 STAT6P42226 847 aa12.6□□□□□ -0.39
VTI1A-208ENST00000494728 FZD5Q13467 585 aa12.6□□□□□ -0.39
VTI1A-208ENST00000494728 UBXN2BQ14CS0 331 aa12.6□□□□□ -0.39
VTI1A-208ENST00000494728 FOXD4L5Q5VV16 416 aaPredicted RBP12.6□□□□□ -0.39
VTI1A-208ENST00000494728 SV2BQ7L1I2 683 aa12.6□□□□□ -0.39
VTI1A-208ENST00000494728 USP37Q86T82 979 aa12.6□□□□□ -0.39
VTI1A-208ENST00000494728 LRRTM3Q86VH5 581 aa12.6□□□□□ -0.39
VTI1A-208ENST00000494728 GPIHBP1Q8IV16 184 aa12.6□□□□□ -0.39
VTI1A-208ENST00000494728 CD302Q8IX05 232 aa12.6□□□□□ -0.39
VTI1A-208ENST00000494728 ZNF687Q8N1G0 1237 aa12.6□□□□□ -0.39
VTI1A-208ENST00000494728 LINC00301Q8NCQ3 95 aa12.6□□□□□ -0.39
VTI1A-208ENST00000494728 STKLD1Q8NE28 680 aa12.6□□□□□ -0.39
VTI1A-208ENST00000494728 CXorf38Q8TB03 319 aa12.6□□□□□ -0.39
VTI1A-208ENST00000494728 FOXD4L4Q8WXT5 416 aaPredicted RBP12.6□□□□□ -0.39
VTI1A-208ENST00000494728 HVCN1Q96D96 273 aa12.6□□□□□ -0.39
VTI1A-208ENST00000494728 LPIN3Q9BQK8 851 aa12.6□□□□□ -0.39
VTI1A-208ENST00000494728 FAM213AQ9BRX8 229 aa12.6□□□□□ -0.39
VTI1A-208ENST00000494728 ASB7Q9H672 318 aa12.6□□□□□ -0.39
VTI1A-208ENST00000494728 LTB4R2Q9NPC1 389 aa12.6□□□□□ -0.39
VTI1A-208ENST00000494728 DPP3Q9NY33 737 aa12.6□□□□□ -0.39
VTI1A-208ENST00000494728 DERAQ9Y315 318 aa12.6□□□□□ -0.39
VTI1A-208ENST00000494728 GOLGA8IPA6NC78 632 aa12.59□□□□□ -0.39
VTI1A-208ENST00000494728 GOLGA8JA6NMD2 632 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms