RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 EDNRBP24530 442 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 IFNAR2P48551 515 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 EFNA5P52803 228 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 IRX3P78415 501 aaPredicted RBP11.88□□□□□ -0.51
CHMP3-209ENST00000494623 DUOXA2Q1HG44 320 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 TMEM132AQ24JP5 1023 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 GKAP1Q5VSY0 366 aaPredicted RBP11.88□□□□□ -0.51
CHMP3-209ENST00000494623 FBXW10Q5XX13 1052 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 DCUN1D2Q6PH85 259 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 EXOC3L1Q86VI1 746 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 RHPN2Q8IUC4 686 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 WDR49Q8IV35 697 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 HOMEZQ8IX15 550 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 CACNA2D3Q8IZS8 1091 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 C3orf20Q8ND61 904 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 EXD1Q8NHP7 514 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 TRAIPQ9BWF2 469 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 STMN4Q9H169 189 aaPredicted RBP11.88□□□□□ -0.51
CHMP3-209ENST00000494623 HOMER3Q9NSC5 361 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 CD2APQ9Y5K6 639 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 CSADQ9Y600 493 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 VGLL3A8MV65 326 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 FOXO6A8MYZ6 492 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 F8VP50 259 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 NOP56O00567 594 aaKnown RBP11.88□□□□□ -0.51
CHMP3-209ENST00000494623 CPP00450 1065 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 TGFB3P10600 412 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 ATF7P17544 494 aaPredicted RBP11.88□□□□□ -0.51
CHMP3-209ENST00000494623 MAPK6Q16659 721 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 CCDC121Q6ZUS5 278 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 YTHDF3Q7Z739 585 aaKnown RBP11.88□□□□□ -0.51
CHMP3-209ENST00000494623 ZBTB8OSQ8IWT0 167 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 NLGN2Q8NFZ4 835 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 TRAPPC12Q8WVT3 735 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 ATXN2LQ8WWM7 1075 aaKnown RBP11.88□□□□□ -0.51
CHMP3-209ENST00000494623 KAT2BQ92831 832 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 ACSF2Q96CM8 615 aaPredicted RBP11.88□□□□□ -0.51
CHMP3-209ENST00000494623 ZBTB10Q96DT7 871 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 MCEEQ96PE7 176 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 ROPN1BQ9BZX4 212 aaPredicted RBP11.88□□□□□ -0.51
CHMP3-209ENST00000494623 ROPN1Q9HAT0 212 aaPredicted RBP11.88□□□□□ -0.51
CHMP3-209ENST00000494623 GGA2Q9UJY4 613 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 ATXN2Q99700 1313 aaKnown RBP11.88□□□□□ -0.51
CHMP3-209ENST00000494623 LCTP09848 1927 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 GOLGA6L7A0A1B0GV03 622 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 C5orf60A6NFR6 353 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 TMEM191CA6NGB0 347 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 IRF6O14896 467 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 OGTO15294 1046 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 FAM189A1O60320 539 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 TTC4O95801 387 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 TMEM191BP0C7N4 346 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 CETN2P41208 172 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 ZNF132P52740 706 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 NFX1Q12986 1120 aaKnown RBP11.88□□□□□ -0.51
CHMP3-209ENST00000494623 SGSM1Q2NKQ1 1148 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 ZNF568Q3ZCX4 644 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 IZUMO3Q5VZ72 239 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 GPAT2Q6NUI2 795 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 MGARPQ8TDB4 240 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 OTUD5Q96G74 571 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 NLRP4Q96MN2 994 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 ELP3Q9H9T3 547 aa11.88□□□□□ -0.51
CHMP3-209ENST00000494623 ADM5C9JUS6 153 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 ATP2C2O75185 946 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 CREB1P16220 341 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 AP3M2P53677 418 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 CAV1Q03135 178 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 R3HDM1Q15032 1099 aaKnown RBP11.87□□□□□ -0.51
CHMP3-209ENST00000494623 CYP4A22Q5TCH4 519 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 DNAJC24Q6P3W2 148 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 TAOK1Q7L7X3 1001 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 GPC2Q8N158 579 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 CCDC89Q8N998 374 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 TMEM35BQ8NCS4 154 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 ARHGEF2Q92974 986 aaKnown RBP11.87□□□□□ -0.51
CHMP3-209ENST00000494623 GPR20Q99678 358 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 CTNNAL1Q9UBT7 734 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 NXF1Q9UBU9 619 aaKnown RBP11.87□□□□□ -0.51
CHMP3-209ENST00000494623 IVNS1ABPQ9Y6Y0 642 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 INO80B-WBP1J3KQ70 363 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 KRT1P04264 644 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 CALB1P05937 261 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 VIMP08670 466 aaKnown RBP11.87□□□□□ -0.51
CHMP3-209ENST00000494623 MXD4Q14582 209 aaPredicted RBP11.87□□□□□ -0.51
CHMP3-209ENST00000494623 LRRC14Q15048 493 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 TNFAIP8L3Q5GJ75 292 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 TMEM63BQ5T3F8 832 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 WDR78Q5VTH9 848 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 MFSD7Q6UXD7 560 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 RCOR2Q8IZ40 523 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 WDTC1Q8N5D0 677 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 UBR7Q8N806 425 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 TCP11Q8WWU5 503 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 TFAP2BQ92481 460 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 COPS5Q92905 334 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 C9orf72Q96LT7 481 aa11.87□□□□□ -0.51
CHMP3-209ENST00000494623 ZNF317Q96PQ6 595 aaPredicted RBP11.87□□□□□ -0.51
CHMP3-209ENST00000494623 INO80BQ9C086 356 aaPredicted RBP11.87□□□□□ -0.51
CHMP3-209ENST00000494623 NIF3L1Q9GZT8 377 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms