RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 TRIM67Q6ZTA4 783 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 ZNF804AQ7Z570 1209 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 RELL1Q8IUW5 271 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 SLC15A3Q8IY34 581 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 OSCARQ8IYS5 282 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 THEMISQ8N1K5 641 aaPredicted RBP10.69□□□□□ -0.7
LINC00488-201ENST00000494582 GSTCDQ8NEC7 633 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 CEP70Q8NHQ1 597 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 ZNF564Q8TBZ8 553 aaPredicted RBP10.69□□□□□ -0.7
LINC00488-201ENST00000494582 FAM172AQ8WUF8 416 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 KAT5Q92993 513 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 OXNAD1Q96HP4 312 aaPredicted RBP10.69□□□□□ -0.7
LINC00488-201ENST00000494582 SLC4A9Q96Q91 983 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 CORO1BQ9BR76 489 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 HEMGNQ9BXL5 484 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 TRIM55Q9BYV6 548 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.69□□□□□ -0.7
LINC00488-201ENST00000494582 TYW1Q9NV66 732 aaKnown RBP10.69□□□□□ -0.7
LINC00488-201ENST00000494582 APEX2Q9UBZ4 518 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 ZNF711Q9Y462 761 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 ADAMTSL3P82987 1691 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 SLC16A3O15427 465 aaKnown RBP10.69□□□□□ -0.7
LINC00488-201ENST00000494582 TM7SF2O76062 418 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 VIL1P09327 827 aaKnown RBP10.69□□□□□ -0.7
LINC00488-201ENST00000494582 MYL2P10916 166 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 SLC5A2P31639 672 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 CD97P48960 835 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 CCDC62Q6P9F0 684 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 ANKS1BQ7Z6G8 1248 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 TDRPQ86YL5 185 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 ARHGEF19Q8IW93 802 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 FAM186BQ8IYM0 893 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 RNF168Q8IYW5 571 aaPredicted RBP10.69□□□□□ -0.7
LINC00488-201ENST00000494582 ZNF34Q8IZ26 560 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 LMO3Q8TAP4 145 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 TCP10LQ8TDR4 215 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 IRGQQ8WZA9 623 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 FAM84BQ96KN1 310 aaPredicted RBP10.69□□□□□ -0.7
LINC00488-201ENST00000494582 SIKE1Q9BRV8 207 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 IQCGQ9H095 443 aaKnown RBP10.69□□□□□ -0.7
LINC00488-201ENST00000494582 TUT1Q9H6E5 874 aaKnown RBP10.69□□□□□ -0.7
LINC00488-201ENST00000494582 MKNK2Q9HBH9 465 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 UBAP1Q9NZ09 502 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 MYO3BQ8WXR4 1341 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 LAMB2P55268 1798 aa10.69□□□□□ -0.7
LINC00488-201ENST00000494582 FRMPD2Q68DX3 1309 aaPredicted RBP10.68□□□□□ -0.7
LINC00488-201ENST00000494582 C15orf38-AP3S2A0A0A6YYH1 394 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 USP17L5A8MUK1 530 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 MEI4A8MW99 385 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 BTBD19C9JJ37 291 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 MTA2O94776 668 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 SGPL1O95470 568 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 COL6A2P12110 1019 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 CHN2P52757 468 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 GEMIN4P57678 1058 aaKnown RBP10.68□□□□□ -0.7
LINC00488-201ENST00000494582 GSTM4Q03013 218 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 KDSRQ06136 332 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 ITGA9Q13797 1035 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 GK3PQ14409 553 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 DLGAP5Q15398 846 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 ZYXQ15942 572 aaKnown RBP10.68□□□□□ -0.7
LINC00488-201ENST00000494582 TRMT5Q32P41 509 aaKnown RBP10.68□□□□□ -0.7
LINC00488-201ENST00000494582 TMCO4Q5TGY1 634 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 C1orf146Q5VVC0 180 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 LRRC8BQ6P9F7 803 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 ARPINQ7Z6K5 226 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 DHDDSQ86SQ9 333 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 WDR66Q8TBY9 1149 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 CCDC110Q8TBZ0 833 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 TSSK1BQ9BXA7 367 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 MANSC1Q9H8J5 431 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 WDR37Q9Y2I8 494 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 ARFGEF1Q9Y6D6 1849 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 ESYT2A0FGR8 921 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 TRIM43BA6NCK2 446 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 ZSCAN5DPP0CG00 497 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 BCRP11274 1271 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 ADCY7P51828 1080 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 OXCT1P55809 520 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 KCNQ4P56696 695 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 CAV1Q03135 178 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 TLR1Q15399 786 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 CCDC174Q6PII3 467 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 C1orf228Q6PIY5 440 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 NOP9Q86U38 636 aaKnown RBP10.68□□□□□ -0.7
LINC00488-201ENST00000494582 ZCCHC9Q8N567 271 aaKnown RBP10.68□□□□□ -0.7
LINC00488-201ENST00000494582 KCNN1Q92952 543 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 TUBB6Q9BUF5 446 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 GRIP2Q9C0E4 1043 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 S100A14Q9HCY8 104 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 PFDN4Q9NQP4 134 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 BTBD7Q9P203 1132 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 PAIP2BQ9ULR5 123 aaKnown RBP10.68□□□□□ -0.7
LINC00488-201ENST00000494582 TAF1P21675 1872 aa10.68□□□□□ -0.7
LINC00488-201ENST00000494582 CCDC160A6NGH7 325 aa10.67□□□□□ -0.7
LINC00488-201ENST00000494582 F5H6K3 240 aa10.67□□□□□ -0.7
LINC00488-201ENST00000494582 TXNDC9O14530 226 aa10.67□□□□□ -0.7
LINC00488-201ENST00000494582 PPP1R11O60927 126 aaPredicted RBP10.67□□□□□ -0.7
LINC00488-201ENST00000494582 GCNT3O95395 438 aa10.67□□□□□ -0.7
LINC00488-201ENST00000494582 KLRC2P26717 231 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms