RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 CTDP1Q9Y5B0 961 aaPredicted RBP6.54□□□□□ -1.36
CPSF7-213ENST00000494016 KIAA1217Q5T5P2 1943 aa6.54□□□□□ -1.36
CPSF7-213ENST00000494016 UBE4BO95155 1302 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 MYH10P35580 1976 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 LCTP09848 1927 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 TMEM150BA6NC51 233 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 KRT86O43790 486 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 PEX14O75381 377 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 EIF3JO75822 258 aaKnown RBP6.53□□□□□ -1.36
CPSF7-213ENST00000494016 ZRANB2O95218 330 aaKnown RBP eCLIP6.53□□□□□ -1.36
CPSF7-213ENST00000494016 CCND2P30279 289 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 GBP2P32456 591 aaPredicted RBP6.53□□□□□ -1.36
CPSF7-213ENST00000494016 PSMC2P35998 433 aaKnown RBP6.53□□□□□ -1.36
CPSF7-213ENST00000494016 JAM2P57087 298 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 GTF2BQ00403 316 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 GFPT1Q06210 699 aaPredicted RBP6.53□□□□□ -1.36
CPSF7-213ENST00000494016 KIF5AQ12840 1032 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 GRM1Q13255 1194 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 CAMK2GQ13555 558 aaPredicted RBP6.53□□□□□ -1.36
CPSF7-213ENST00000494016 MTMR1Q13613 665 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 MYBPC2Q14324 1141 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 SPA17Q15506 151 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 WHAMMP3Q1A5X7 153 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 PPM1JQ5JR12 505 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 ODR4Q5SWX8 454 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 ARHGEF16Q5VV41 709 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 CST9Q5W186 159 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 SNRNP48Q6IEG0 339 aaKnown RBP6.53□□□□□ -1.36
CPSF7-213ENST00000494016 SEZ6L2Q6UXD5 910 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 USP50Q70EL3 339 aaPredicted RBP6.53□□□□□ -1.36
CPSF7-213ENST00000494016 CYFIP1Q7L576 1253 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 MAEAQ7L5Y9 396 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 HS2ST1Q7LGA3 356 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 HDXQ7Z353 690 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 CACNA2D4Q7Z3S7 1137 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 C12orf40Q86WS4 652 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 FAM178BQ8IXR5 827 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 CEP112Q8N8E3 955 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 RABGGTAQ92696 567 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 GPRASP2Q96D09 838 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 MOV10L1Q9BXT6 1211 aaKnown RBP6.53□□□□□ -1.36
CPSF7-213ENST00000494016 PARD6BQ9BYG5 372 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 KRTAP4-7Q9BYR0 210 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 MCOLN1Q9GZU1 580 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 MAF1Q9H063 256 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 ST6GALNAC4Q9H4F1 302 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 ANKZF1Q9H8Y5 726 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 MLXIPQ9HAP2 919 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 PDLIM7Q9NR12 457 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 METTL5Q9NRN9 209 aaKnown RBP6.53□□□□□ -1.36
CPSF7-213ENST00000494016 AGPAT3Q9NRZ7 376 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 ANKEF1Q9NU02 776 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 HOXC10Q9NYD6 342 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 CYP39A1Q9NYL5 469 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 GGA3Q9NZ52 723 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 OGFRQ9NZT2 677 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 HDAC6Q9UBN7 1215 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 PRKAG2Q9UGJ0 569 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 PUF60Q9UHX1 559 aaKnown RBP6.53□□□□□ -1.36
CPSF7-213ENST00000494016 PPP2R3BQ9Y5P8 575 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 CSADQ9Y600 493 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 SNCAIPQ9Y6H5 919 aa6.53□□□□□ -1.36
CPSF7-213ENST00000494016 MYPNQ86TC9 1320 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 DOCK5Q9H7D0 1870 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 A0A087X0T9 212 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 GTPBP10A4D1E9 387 aaKnown RBP6.52□□□□□ -1.37
CPSF7-213ENST00000494016 ADM5C9JUS6 153 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 DYNC1LI2O43237 492 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-213ENST00000494016 AKR1B10O60218 316 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 USO1O60763 962 aaKnown RBP6.52□□□□□ -1.37
CPSF7-213ENST00000494016 SRGAP2O75044 1071 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 MOCS3O95396 460 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 PF4P02776 101 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 FAM228BP0C875 321 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 EPB41P11171 864 aaKnown RBP6.52□□□□□ -1.37
CPSF7-213ENST00000494016 PLS3P13797 630 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 UCHL3P15374 230 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 KCNA2P16389 499 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 PRLRP16471 622 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 YWHABP31946 246 aaKnown RBP6.52□□□□□ -1.37
CPSF7-213ENST00000494016 SFNP31947 248 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 NTF4P34130 210 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 PRKCIP41743 596 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 NPEPPSP55786 919 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 CHMP4BP1P59074 171 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 PSMC5P62195 406 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 SP2Q02086 613 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 PRKG1Q13976 671 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 ASIC2Q16515 512 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 EXOC3L4Q17RC7 722 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 SLC9C1Q4G0N8 1177 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 C1orf220Q5T0J3 134 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 TEX35Q5T0J7 233 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 EGFLAMQ63HQ2 1017 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 IQCEQ6IPM2 695 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 ZNF746Q6NUN9 644 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-213ENST00000494016 GJB7Q6PEY0 223 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 GBP6Q6ZN66 633 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 ANO5Q75V66 913 aa6.52□□□□□ -1.37
CPSF7-213ENST00000494016 C12orf56Q8IXR9 622 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms