RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 MFSD14AQ96MC6 490 aa17.42■□□□□ 0.38
SATB1-217ENST00000493952 CGRRF1Q99675 332 aa17.42■□□□□ 0.38
SATB1-217ENST00000493952 PIDD1Q9HB75 910 aa17.42■□□□□ 0.38
SATB1-217ENST00000493952 TRAF3IP3Q9Y228 551 aa17.42■□□□□ 0.38
SATB1-217ENST00000493952 NR2E1Q9Y466 385 aa17.42■□□□□ 0.38
SATB1-217ENST00000493952 ARHGEF37A1IGU5 675 aa17.41■□□□□ 0.38
SATB1-217ENST00000493952 C2CD4DB7Z1M9 353 aa17.41■□□□□ 0.38
SATB1-217ENST00000493952 CCL16O15467 120 aa17.41■□□□□ 0.38
SATB1-217ENST00000493952 KINO60870 393 aaKnown RBP17.41■□□□□ 0.38
SATB1-217ENST00000493952 KIF20AO95235 890 aa17.41■□□□□ 0.38
SATB1-217ENST00000493952 TNNC2P02585 160 aa17.41■□□□□ 0.38
SATB1-217ENST00000493952 CYP11A1P05108 521 aa17.41■□□□□ 0.38
SATB1-217ENST00000493952 HNRNPA1P09651 372 aaKnown RBP eCLIP17.41■□□□□ 0.38
SATB1-217ENST00000493952 OR4Q2P0C623 313 aa17.41■□□□□ 0.38
SATB1-217ENST00000493952 CPB1P15086 417 aa17.41■□□□□ 0.38
SATB1-217ENST00000493952 ATF2P15336 505 aa17.41■□□□□ 0.38
SATB1-217ENST00000493952 TNNI1P19237 187 aa17.41■□□□□ 0.38
SATB1-217ENST00000493952 CASP4P49662 377 aa17.41■□□□□ 0.38
SATB1-217ENST00000493952 BFSP1Q12934 665 aa17.41■□□□□ 0.38
SATB1-217ENST00000493952 DUOXA2Q1HG44 320 aa17.41■□□□□ 0.38
SATB1-217ENST00000493952 LRRC52Q8N7C0 313 aa17.41■□□□□ 0.38
SATB1-217ENST00000493952 SPATA20Q8TB22 786 aa17.41■□□□□ 0.38
SATB1-217ENST00000493952 FNBP1Q96RU3 617 aa17.41■□□□□ 0.38
SATB1-217ENST00000493952 WDR6Q9NNW5 1121 aaKnown RBP17.41■□□□□ 0.38
SATB1-217ENST00000493952 RMND1Q9NWS8 449 aa17.41■□□□□ 0.38
SATB1-217ENST00000493952 PCDHA5Q9Y5H7 936 aa17.41■□□□□ 0.38
SATB1-217ENST00000493952 CLUHO75153 1309 aa17.41■□□□□ 0.38
SATB1-217ENST00000493952 CALUO43852 315 aaPredicted RBP17.4■□□□□ 0.38
SATB1-217ENST00000493952 PRPF40AO75400 957 aaKnown RBP17.4■□□□□ 0.38
SATB1-217ENST00000493952 SMC2O95347 1197 aa17.4■□□□□ 0.38
SATB1-217ENST00000493952 SEC24AO95486 1093 aa17.4■□□□□ 0.38
SATB1-217ENST00000493952 VNN2O95498 520 aa17.4■□□□□ 0.38
SATB1-217ENST00000493952 HOXA9P31269 272 aa17.4■□□□□ 0.38
SATB1-217ENST00000493952 RBP5P82980 135 aa17.4■□□□□ 0.38
SATB1-217ENST00000493952 UVSSAQ2YD98 709 aa17.4■□□□□ 0.38
SATB1-217ENST00000493952 TPGS2Q68CL5 300 aa17.4■□□□□ 0.38
SATB1-217ENST00000493952 RNF19BQ6ZMZ0 732 aa17.4■□□□□ 0.38
SATB1-217ENST00000493952 TRAPPC11Q7Z392 1133 aa17.4■□□□□ 0.38
SATB1-217ENST00000493952 TCEAL8Q8IYN2 117 aa17.4■□□□□ 0.38
SATB1-217ENST00000493952 OR10T2Q8NGX3 314 aa17.4■□□□□ 0.38
SATB1-217ENST00000493952 ZNF516Q92618 1163 aa17.4■□□□□ 0.38
SATB1-217ENST00000493952 SMARCE1Q969G3 411 aa17.4■□□□□ 0.38
SATB1-217ENST00000493952 GSDMAQ96QA5 445 aa17.4■□□□□ 0.38
SATB1-217ENST00000493952 TMEM209Q96SK2 561 aa17.4■□□□□ 0.38
SATB1-217ENST00000493952 OXCT2Q9BYC2 517 aaPredicted RBP17.4■□□□□ 0.38
SATB1-217ENST00000493952 EPHX3Q9H6B9 360 aa17.4■□□□□ 0.38
SATB1-217ENST00000493952 CYP4F11Q9HBI6 524 aa17.4■□□□□ 0.38
SATB1-217ENST00000493952 MUTYHQ9UIF7 546 aa17.4■□□□□ 0.38
SATB1-217ENST00000493952 HOOK1Q9UJC3 728 aaKnown RBP17.4■□□□□ 0.38
SATB1-217ENST00000493952 DSEQ9UL01 958 aa17.4■□□□□ 0.38
SATB1-217ENST00000493952 USTQ9Y2C2 406 aa17.4■□□□□ 0.38
SATB1-217ENST00000493952 GREB1Q4ZG55 1949 aa17.4■□□□□ 0.38
SATB1-217ENST00000493952 OR6C75A6NL08 312 aa17.39■□□□□ 0.37
SATB1-217ENST00000493952 PRRG1O14668 218 aa17.39■□□□□ 0.37
SATB1-217ENST00000493952 ELF1P32519 619 aa17.39■□□□□ 0.37
SATB1-217ENST00000493952 ADCY1Q08828 1119 aa17.39■□□□□ 0.37
SATB1-217ENST00000493952 MYBPC2Q14324 1141 aa17.39■□□□□ 0.37
SATB1-217ENST00000493952 NFIL3Q16649 462 aa17.39■□□□□ 0.37
SATB1-217ENST00000493952 ZCWPW2Q504Y3 356 aa17.39■□□□□ 0.37
SATB1-217ENST00000493952 ZNF658Q5TYW1 1059 aaPredicted RBP17.39■□□□□ 0.37
SATB1-217ENST00000493952 WSCD1Q658N2 575 aa17.39■□□□□ 0.37
SATB1-217ENST00000493952 METTL23Q86XA0 190 aa17.39■□□□□ 0.37
SATB1-217ENST00000493952 ELOA2Q8IYF1 753 aaPredicted RBP17.39■□□□□ 0.37
SATB1-217ENST00000493952 TDRD5Q8NAT2 981 aaKnown RBP17.39■□□□□ 0.37
SATB1-217ENST00000493952 PGLYRP2Q96PD5 576 aa17.39■□□□□ 0.37
SATB1-217ENST00000493952 RTP3Q9BQQ7 232 aa17.39■□□□□ 0.37
SATB1-217ENST00000493952 AFF4Q9UHB7 1163 aaKnown RBP17.39■□□□□ 0.37
SATB1-217ENST00000493952 L1RE1Q9UN81 338 aa17.39■□□□□ 0.37
SATB1-217ENST00000493952 POLIQ9UNA4 740 aa17.39■□□□□ 0.37
SATB1-217ENST00000493952 MYH10P35580 1976 aa17.39■□□□□ 0.37
SATB1-217ENST00000493952 LRRIQ3A6PVS8 624 aaPredicted RBP17.38■□□□□ 0.37
SATB1-217ENST00000493952 PI4K2BG5E9Z4 385 aa17.38■□□□□ 0.37
SATB1-217ENST00000493952 POU2F2P09086 479 aa17.38■□□□□ 0.37
SATB1-217ENST00000493952 NR2F2P24468 414 aa17.38■□□□□ 0.37
SATB1-217ENST00000493952 PRCPP42785 496 aa17.38■□□□□ 0.37
SATB1-217ENST00000493952 UBE2HP62256 183 aa17.38■□□□□ 0.37
SATB1-217ENST00000493952 NTHL1P78549 312 aa17.38■□□□□ 0.37
SATB1-217ENST00000493952 GPR17Q13304 367 aa17.38■□□□□ 0.37
SATB1-217ENST00000493952 CEP135Q66GS9 1140 aa17.38■□□□□ 0.37
SATB1-217ENST00000493952 RTL10Q7L3V2 364 aa17.38■□□□□ 0.37
SATB1-217ENST00000493952 GRASPQ7Z6J2 395 aaPredicted RBP17.38■□□□□ 0.37
SATB1-217ENST00000493952 PDCL2Q8N4E4 241 aa17.38■□□□□ 0.37
SATB1-217ENST00000493952 PARD3BQ8TEW8 1205 aa17.38■□□□□ 0.37
SATB1-217ENST00000493952 HPDLQ96IR7 371 aa17.38■□□□□ 0.37
SATB1-217ENST00000493952 HCFC1R1Q9NWW0 138 aa17.38■□□□□ 0.37
SATB1-217ENST00000493952 GDAP2Q9NXN4 497 aa17.38■□□□□ 0.37
SATB1-217ENST00000493952 INSL5Q9Y5Q6 135 aa17.38■□□□□ 0.37
SATB1-217ENST00000493952 SNX9Q9Y5X1 595 aa17.38■□□□□ 0.37
SATB1-217ENST00000493952 ZNF638Q14966 1978 aaKnown RBP17.37■□□□□ 0.37
SATB1-217ENST00000493952 DCXO43602 365 aa17.37■□□□□ 0.37
SATB1-217ENST00000493952 HUS1O60921 280 aa17.37■□□□□ 0.37
SATB1-217ENST00000493952 N4BP1O75113 896 aaKnown RBP17.37■□□□□ 0.37
SATB1-217ENST00000493952 XYLBO75191 536 aa17.37■□□□□ 0.37
SATB1-217ENST00000493952 CST3P01034 146 aaPredicted RBP17.37■□□□□ 0.37
SATB1-217ENST00000493952 LRG1P02750 347 aa17.37■□□□□ 0.37
SATB1-217ENST00000493952 DLG4P78352 724 aa17.37■□□□□ 0.37
SATB1-217ENST00000493952 CLDN10P78369 228 aa17.37■□□□□ 0.37
SATB1-217ENST00000493952 MYO1EQ12965 1108 aa17.37■□□□□ 0.37
SATB1-217ENST00000493952 COBLL1Q53SF7 1204 aa17.37■□□□□ 0.37
SATB1-217ENST00000493952 OTOP3Q7RTS5 596 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms