RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 LDAHQ9H6V9 325 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 IGSF9Q9P2J2 1179 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 SRP68Q9UHB9 627 aaKnown RBP5.14□□□□□ -1.59
GTF3A-208ENST00000493903 ITGB1BP2Q9UKP3 347 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 AFG3L2Q9Y4W6 797 aa5.14□□□□□ -1.59
GTF3A-208ENST00000493903 A0A0B4J269 797 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 ANKRD18BA2A2Z9 1011 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 OR14I1A6ND48 311 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.13□□□□□ -1.59
GTF3A-208ENST00000493903 CCER2I3L3R5 266 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 MTSS1O43312 755 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 ITGA10O75578 1167 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 KLHL18O94889 574 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 NDST3O95803 873 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 A1BGP04217 495 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 FBLN1P23142 703 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 CNTFP26441 200 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 IL1R2P27930 398 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 ADD2P35612 726 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 ADCY8P40145 1251 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 ADAM9Q13443 819 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 TOMM20Q15388 145 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 MAPKAPK3Q16644 382 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 TIGD6Q17RP2 521 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 LIN54Q6MZP7 749 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 C16orf54Q6UWD8 224 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 PDSS2Q86YH6 399 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 HERC6Q8IVU3 1022 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 FAM9BQ8IZU0 186 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 TSPYL6Q8N831 410 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 DCBLD1Q8N8Z6 715 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 NGDNQ8NEJ9 315 aaKnown RBP5.13□□□□□ -1.59
GTF3A-208ENST00000493903 ABHD4Q8TB40 342 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 THAP4Q8WY91 577 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 LPPQ93052 612 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 LRRC46Q96FV0 321 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 LIN37Q96GY3 246 aaPredicted RBP5.13□□□□□ -1.59
GTF3A-208ENST00000493903 INTS4Q96HW7 963 aaKnown RBP5.13□□□□□ -1.59
GTF3A-208ENST00000493903 MAELQ96JY0 434 aaKnown RBP5.13□□□□□ -1.59
GTF3A-208ENST00000493903 FMNL2Q96PY5 1086 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 DDX23Q9BUQ8 820 aaKnown RBP5.13□□□□□ -1.59
GTF3A-208ENST00000493903 LSM14BQ9BX40 385 aaKnown RBP5.13□□□□□ -1.59
GTF3A-208ENST00000493903 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.13□□□□□ -1.59
GTF3A-208ENST00000493903 RNF32Q9H0A6 362 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 SLC6A17Q9H1V8 727 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 BRD9Q9H8M2 597 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 VPS45Q9NRW7 570 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 SPATA6Q9NWH7 488 aaPredicted RBP5.13□□□□□ -1.59
GTF3A-208ENST00000493903 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.13□□□□□ -1.59
GTF3A-208ENST00000493903 CA14Q9ULX7 337 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 PLEKHM1Q9Y4G2 1056 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 TTLL3Q9Y4R7 772 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 ACTL7AQ9Y615 435 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 MYO15BQ96JP2 1530 aa5.13□□□□□ -1.59
GTF3A-208ENST00000493903 A6NCN8 305 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 PRSS29PA6NIE9 313 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 NRP1O14786 923 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 PIP5K1BO14986 540 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 GRM6O15303 877 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 SLC43A1O75387 559 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 GLP2RO95838 553 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 KNG1P01042 644 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 ANXA1P04083 346 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 GNAI2P04899 355 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 GLI1P08151 1106 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 RARBP10826 455 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 ALOX15P16050 662 aaPredicted RBP5.12□□□□□ -1.59
GTF3A-208ENST00000493903 SDHBP21912 280 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 PTPN7P35236 360 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 KIR2DL3P43628 341 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 CLNS1AP54105 237 aaKnown RBP5.12□□□□□ -1.59
GTF3A-208ENST00000493903 NAP1L1P55209 391 aaKnown RBP5.12□□□□□ -1.59
GTF3A-208ENST00000493903 NOMO3P69849 1222 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 NUCB1Q02818 461 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 DUSP2Q05923 314 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 TRPC3Q13507 836 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 TRIM71Q2Q1W2 868 aaKnown RBP5.12□□□□□ -1.59
GTF3A-208ENST00000493903 ICE2Q659A1 982 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 TRIM68Q6AZZ1 485 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 OTUD7BQ6GQQ9 843 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 SULT6B1Q6IMI4 303 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 KLHL17Q6TDP4 642 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 SEM1Q6ZVN7 128 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 NEK10Q6ZWH5 1172 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 FASTKD5Q7L8L6 764 aaKnown RBP5.12□□□□□ -1.59
GTF3A-208ENST00000493903 C2CD5Q86YS7 1000 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 AOPEPQ8N6M6 819 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 PLA2G15Q8NCC3 412 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 OR56A3Q8NH54 315 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 CENPIQ92674 756 aaPredicted RBP5.12□□□□□ -1.59
GTF3A-208ENST00000493903 RSC1A1Q92681 617 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 NELL2Q99435 816 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 PRPF18Q99633 342 aaKnown RBP5.12□□□□□ -1.59
GTF3A-208ENST00000493903 TREX2Q9BQ50 279 aaPredicted RBP5.12□□□□□ -1.59
GTF3A-208ENST00000493903 PACSIN1Q9BY11 444 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 DHX36Q9H2U1 1008 aaKnown RBP5.12□□□□□ -1.59
GTF3A-208ENST00000493903 HEYLQ9NQ87 328 aaPredicted RBP5.12□□□□□ -1.59
GTF3A-208ENST00000493903 CAPN11Q9UMQ6 739 aa5.12□□□□□ -1.59
GTF3A-208ENST00000493903 TISP43B9A030 160 aa5.11□□□□□ -1.59
GTF3A-208ENST00000493903 B9A039 149 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms