RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 ASAP2O43150 1006 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 B4GALT5O43286 388 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 THAP12O43422 761 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 PHF2O75151 1096 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 ATP2C2O75185 946 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 COQ9O75208 318 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 LGALS2P05162 132 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 MYL6P60660 151 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 MAGOHP61326 146 aaKnown RBP14.64□□□□□ -0.07
VCP-207ENST00000493886 NOMO3P69849 1222 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 IGBP1P78318 339 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 DHX34Q14147 1143 aaKnown RBP14.64□□□□□ -0.07
VCP-207ENST00000493886 UBR7Q8N806 425 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 PRELID2Q8N945 189 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 MAGOHBQ96A72 148 aaKnown RBP14.64□□□□□ -0.07
VCP-207ENST00000493886 MS4A4AQ96JQ5 239 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 TRIM7Q9C029 511 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 PLXNA1Q9UIW2 1896 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 BTBD19C9JJ37 291 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 HOXC6P09630 235 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 POTEJP0CG39 1038 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 CETPP11597 493 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 INSRRP14616 1297 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 SSTR3P32745 418 aaPredicted RBP14.64□□□□□ -0.07
VCP-207ENST00000493886 MBTD1Q05BQ5 628 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 IFFO1Q0D2I5 559 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 MKRN3Q13064 507 aaKnown RBP14.64□□□□□ -0.07
VCP-207ENST00000493886 ZNF484Q5JVG2 852 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 EEF1DP3Q658K8 133 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 LLGL2Q6P1M3 1020 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 TMC3Q7Z5M5 1100 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 CDR2LQ86X02 465 aaPredicted RBP14.64□□□□□ -0.07
VCP-207ENST00000493886 ZDHHC14Q8IZN3 488 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 FAM210AQ96ND0 272 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 C11orf70Q9BRQ4 267 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 MINDY3Q9H8M7 445 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 VTA1Q9NP79 307 aa14.64□□□□□ -0.07
VCP-207ENST00000493886 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.64□□□□□ -0.07
VCP-207ENST00000493886 FAM187AA6NFU0 413 aa14.63□□□□□ -0.07
VCP-207ENST00000493886 NEBLO76041 1014 aa14.63□□□□□ -0.07
VCP-207ENST00000493886 GH1P01241 217 aa14.63□□□□□ -0.07
VCP-207ENST00000493886 CHRNA3P32297 505 aa14.63□□□□□ -0.07
VCP-207ENST00000493886 ZNF132P52740 706 aa14.63□□□□□ -0.07
VCP-207ENST00000493886 TFAMQ00059 246 aaKnown RBP14.63□□□□□ -0.07
VCP-207ENST00000493886 CHADLQ6NUI6 762 aa14.63□□□□□ -0.07
VCP-207ENST00000493886 B4GALNT4Q76KP1 1039 aa14.63□□□□□ -0.07
VCP-207ENST00000493886 SLC13A5Q86YT5 568 aaPredicted RBP14.63□□□□□ -0.07
VCP-207ENST00000493886 PLXNB2O15031 1838 aa14.63□□□□□ -0.07
VCP-207ENST00000493886 CCL15-CCL14A0A0B4J2E2 113 aa14.63□□□□□ -0.07
VCP-207ENST00000493886 UNCXA6NJT0 531 aa14.63□□□□□ -0.07
VCP-207ENST00000493886 MEFVO15553 781 aaPredicted RBP14.63□□□□□ -0.07
VCP-207ENST00000493886 OSTNP61366 133 aa14.63□□□□□ -0.07
VCP-207ENST00000493886 TRPC3Q13507 836 aa14.63□□□□□ -0.07
VCP-207ENST00000493886 CCL15Q16663 113 aa14.63□□□□□ -0.07
VCP-207ENST00000493886 QPCTQ16769 361 aa14.63□□□□□ -0.07
VCP-207ENST00000493886 SGSM1Q2NKQ1 1148 aa14.63□□□□□ -0.07
VCP-207ENST00000493886 UBAP2Q5T6F2 1119 aaKnown RBP14.63□□□□□ -0.07
VCP-207ENST00000493886 LIN9Q5TKA1 542 aa14.63□□□□□ -0.07
VCP-207ENST00000493886 MAP1SQ66K74 1059 aaPredicted RBP14.63□□□□□ -0.07
VCP-207ENST00000493886 MAMDC4Q6UXC1 1216 aa14.63□□□□□ -0.07
VCP-207ENST00000493886 MDM1Q8TC05 714 aa14.63□□□□□ -0.07
VCP-207ENST00000493886 C18orf8Q96DM3 657 aa14.63□□□□□ -0.07
VCP-207ENST00000493886 ERP44Q9BS26 406 aa14.63□□□□□ -0.07
VCP-207ENST00000493886 NIF3L1Q9GZT8 377 aa14.63□□□□□ -0.07
VCP-207ENST00000493886 ADAM22Q9P0K1 906 aa14.63□□□□□ -0.07
VCP-207ENST00000493886 SLC45A1Q9Y2W3 748 aa14.63□□□□□ -0.07
VCP-207ENST00000493886 TMEM191BP0C7N4 346 aa14.62□□□□□ -0.07
VCP-207ENST00000493886 GTF2A2P52657 109 aa14.62□□□□□ -0.07
VCP-207ENST00000493886 DUPD1Q68J44 220 aa14.62□□□□□ -0.07
VCP-207ENST00000493886 PHF13Q86YI8 300 aaPredicted RBP14.62□□□□□ -0.07
VCP-207ENST00000493886 JAMLQ86YT9 394 aa14.62□□□□□ -0.07
VCP-207ENST00000493886 ZNF606Q8WXB4 792 aa14.62□□□□□ -0.07
VCP-207ENST00000493886 TNFSF13BQ9Y275 285 aa14.62□□□□□ -0.07
VCP-207ENST00000493886 IVNS1ABPQ9Y6Y0 642 aa14.62□□□□□ -0.07
VCP-207ENST00000493886 TCRBV7S2A1N4TA0A589 114 aa14.62□□□□□ -0.07
VCP-207ENST00000493886 TLDC2A0PJX2 215 aa14.62□□□□□ -0.07
VCP-207ENST00000493886 ECM2O94769 699 aaPredicted RBP14.62□□□□□ -0.07
VCP-207ENST00000493886 CPP00450 1065 aa14.62□□□□□ -0.07
VCP-207ENST00000493886 IQCF3P0C7M6 154 aa14.62□□□□□ -0.07
VCP-207ENST00000493886 SLC1A1P43005 524 aa14.62□□□□□ -0.07
VCP-207ENST00000493886 PLTPP55058 493 aa14.62□□□□□ -0.07
VCP-207ENST00000493886 PPTC7Q8NI37 304 aa14.62□□□□□ -0.07
VCP-207ENST00000493886 AFG1LQ8WV93 481 aa14.62□□□□□ -0.07
VCP-207ENST00000493886 VCPIP1Q96JH7 1222 aa14.62□□□□□ -0.07
VCP-207ENST00000493886 NFKBIZQ9BYH8 718 aa14.62□□□□□ -0.07
VCP-207ENST00000493886 CDT1Q9H211 546 aa14.62□□□□□ -0.07
VCP-207ENST00000493886 IFT122Q9HBG6 1241 aa14.62□□□□□ -0.07
VCP-207ENST00000493886 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.62□□□□□ -0.07
VCP-207ENST00000493886 PCYOX1Q9UHG3 505 aa14.62□□□□□ -0.07
VCP-207ENST00000493886 RASAL2Q9UJF2 1139 aa14.62□□□□□ -0.07
VCP-207ENST00000493886 MTUS1Q9ULD2 1270 aa14.62□□□□□ -0.07
VCP-207ENST00000493886 SNX24Q9Y343 169 aa14.62□□□□□ -0.07
VCP-207ENST00000493886 RBM47A0AV96 593 aaKnown RBP14.62□□□□□ -0.07
VCP-207ENST00000493886 B4GALT4O60513 344 aa14.62□□□□□ -0.07
VCP-207ENST00000493886 SHBGP04278 402 aa14.62□□□□□ -0.07
VCP-207ENST00000493886 CD58P19256 250 aa14.62□□□□□ -0.07
VCP-207ENST00000493886 PTGIRP43119 386 aa14.62□□□□□ -0.07
VCP-207ENST00000493886 PPP1R2P3Q6NXS1 205 aa14.62□□□□□ -0.07
VCP-207ENST00000493886 BRI3BPQ8WY22 251 aa14.62□□□□□ -0.07
VCP-207ENST00000493886 FMO2Q99518 471 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms