RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 DDX19AQ9NUU7 478 aaKnown RBP8.29□□□□□ -1.08
RBM39-238ENST00000493853 FBXL21Q9UKT6 434 aa8.29□□□□□ -1.08
RBM39-238ENST00000493853 GDAQ9Y2T3 454 aa8.29□□□□□ -1.08
RBM39-238ENST00000493853 FNDC1Q4ZHG4 1894 aaPredicted RBP8.28□□□□□ -1.08
RBM39-238ENST00000493853 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.28□□□□□ -1.08
RBM39-238ENST00000493853 F8W810 466 aa8.28□□□□□ -1.08
RBM39-238ENST00000493853 H3BQV1 296 aa8.28□□□□□ -1.08
RBM39-238ENST00000493853 TGFBR3LH3BV60 316 aa8.28□□□□□ -1.08
RBM39-238ENST00000493853 LAD1O00515 517 aa8.28□□□□□ -1.08
RBM39-238ENST00000493853 TGM5O43548 720 aa8.28□□□□□ -1.08
RBM39-238ENST00000493853 TRAPPC3O43617 180 aa8.28□□□□□ -1.08
RBM39-238ENST00000493853 RFPL2O75678 378 aa8.28□□□□□ -1.08
RBM39-238ENST00000493853 RECQL4O94761 1208 aa8.28□□□□□ -1.08
RBM39-238ENST00000493853 PDGFBP01127 241 aaPredicted RBP8.28□□□□□ -1.08
RBM39-238ENST00000493853 U2AF2P26368 475 aaKnown RBP eCLIP8.28□□□□□ -1.08
RBM39-238ENST00000493853 COL8A1P27658 744 aa8.28□□□□□ -1.08
RBM39-238ENST00000493853 DMP1Q13316 513 aaPredicted RBP8.28□□□□□ -1.08
RBM39-238ENST00000493853 TDGQ13569 410 aa8.28□□□□□ -1.08
RBM39-238ENST00000493853 LIN9Q5TKA1 542 aa8.28□□□□□ -1.08
RBM39-238ENST00000493853 ATF7IP2Q5U623 682 aa8.28□□□□□ -1.08
RBM39-238ENST00000493853 FAM171A1Q5VUB5 890 aa8.28□□□□□ -1.08
RBM39-238ENST00000493853 PDXDC1Q6P996 788 aa8.28□□□□□ -1.08
RBM39-238ENST00000493853 GSTCDQ8NEC7 633 aa8.28□□□□□ -1.08
RBM39-238ENST00000493853 PRSS33Q8NF86 280 aa8.28□□□□□ -1.08
RBM39-238ENST00000493853 HASPINQ8TF76 798 aa8.28□□□□□ -1.08
RBM39-238ENST00000493853 CDK5RAP3Q96JB5 506 aa8.28□□□□□ -1.08
RBM39-238ENST00000493853 TTPALQ9BTX7 342 aa8.28□□□□□ -1.08
RBM39-238ENST00000493853 PDZD7Q9H5P4 517 aa8.28□□□□□ -1.08
RBM39-238ENST00000493853 WDR6Q9NNW5 1121 aaKnown RBP8.28□□□□□ -1.08
RBM39-238ENST00000493853 NOP53Q9NZM5 478 aaKnown RBP8.28□□□□□ -1.08
RBM39-238ENST00000493853 FNIP2Q9P278 1114 aa8.28□□□□□ -1.08
RBM39-238ENST00000493853 IGSF9Q9P2J2 1179 aa8.28□□□□□ -1.08
RBM39-238ENST00000493853 KCNG1Q9UIX4 513 aa8.28□□□□□ -1.08
RBM39-238ENST00000493853 USP20Q9Y2K6 914 aa8.28□□□□□ -1.08
RBM39-238ENST00000493853 LOXHD1Q8IVV2 1947 aa8.28□□□□□ -1.08
RBM39-238ENST00000493853 PLXNA4Q9HCM2 1894 aa8.28□□□□□ -1.08
RBM39-238ENST00000493853 ZMYM2Q9UBW7 1377 aa8.27□□□□□ -1.09
RBM39-238ENST00000493853 ADARB2-AS1A8MUL3 147 aa8.27□□□□□ -1.09
RBM39-238ENST00000493853 MSTNO14793 375 aa8.27□□□□□ -1.09
RBM39-238ENST00000493853 C1RP00736 705 aa8.27□□□□□ -1.09
RBM39-238ENST00000493853 RPL17P18621 184 aaKnown RBP8.27□□□□□ -1.09
RBM39-238ENST00000493853 VCPP55072 806 aaKnown RBP8.27□□□□□ -1.09
RBM39-238ENST00000493853 PEX3P56589 373 aa8.27□□□□□ -1.09
RBM39-238ENST00000493853 RABEP1Q15276 862 aa8.27□□□□□ -1.09
RBM39-238ENST00000493853 PSMD5Q16401 504 aa8.27□□□□□ -1.09
RBM39-238ENST00000493853 PRSS55Q6UWB4 352 aaPredicted RBP8.27□□□□□ -1.09
RBM39-238ENST00000493853 C4orf32Q8N8J7 132 aa8.27□□□□□ -1.09
RBM39-238ENST00000493853 IGSF22Q8N9C0 903 aa8.27□□□□□ -1.09
RBM39-238ENST00000493853 FLCNQ8NFG4 579 aa8.27□□□□□ -1.09
RBM39-238ENST00000493853 BSNDQ8WZ55 320 aa8.27□□□□□ -1.09
RBM39-238ENST00000493853 DRC1Q96MC2 740 aa8.27□□□□□ -1.09
RBM39-238ENST00000493853 KIFC3Q9BVG8 833 aa8.27□□□□□ -1.09
RBM39-238ENST00000493853 CCDC94Q9BW85 323 aaPredicted RBP8.27□□□□□ -1.09
RBM39-238ENST00000493853 NT5C3AQ9H0P0 336 aa8.27□□□□□ -1.09
RBM39-238ENST00000493853 KCNK12Q9HB15 430 aa8.27□□□□□ -1.09
RBM39-238ENST00000493853 KMT5AQ9NQR1 393 aa8.27□□□□□ -1.09
RBM39-238ENST00000493853 TOPORSQ9NS56 1045 aaPredicted RBP8.27□□□□□ -1.09
RBM39-238ENST00000493853 ZDHHC7Q9NXF8 308 aa8.27□□□□□ -1.09
RBM39-238ENST00000493853 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.27□□□□□ -1.09
RBM39-238ENST00000493853 POLIQ9UNA4 740 aa8.27□□□□□ -1.09
RBM39-238ENST00000493853 PCDHB6Q9Y5E3 794 aa8.27□□□□□ -1.09
RBM39-238ENST00000493853 CLUHO75153 1309 aa8.27□□□□□ -1.09
RBM39-238ENST00000493853 PHLPP2Q6ZVD8 1323 aa8.27□□□□□ -1.09
RBM39-238ENST00000493853 KRBA1A5PL33 1030 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 E9PMD0 336 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 H0Y858 1186 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 PTGESO14684 152 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 HIP1RO75146 1068 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 XYLBO75191 536 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 B3GAT3O94766 335 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 EFEMP2O95967 443 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 EPB42P16452 691 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 CDC25AP30304 524 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 ADH7P40394 386 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 PRPHP41219 470 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 MATR3P43243 847 aaKnown RBP eCLIP8.26□□□□□ -1.09
RBM39-238ENST00000493853 NPTX2P47972 431 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 TOB1P50616 345 aaPredicted RBP8.26□□□□□ -1.09
RBM39-238ENST00000493853 CLCN5P51795 746 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 OSTNP61366 133 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 STRN3Q13033 797 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 ELOAQ14241 798 aaKnown RBP8.26□□□□□ -1.09
RBM39-238ENST00000493853 ECM1Q16610 540 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 SWI5Q1ZZU3 235 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 ZNF568Q3ZCX4 644 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 RILPL1Q5EBL4 403 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 GLRA4Q5JXX5 417 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 RTP2Q5QGT7 225 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 PPM1LQ5SGD2 360 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 NT5DC1Q5TFE4 455 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 EEF1DP3Q658K8 133 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 DCLRE1AQ6PJP8 1040 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 GET4Q7L5D6 327 aaPredicted RBP8.26□□□□□ -1.09
RBM39-238ENST00000493853 RNF168Q8IYW5 571 aaPredicted RBP8.26□□□□□ -1.09
RBM39-238ENST00000493853 PIK3R5Q8WYR1 880 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 NXPE3Q969Y0 559 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 UROC1Q96N76 676 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 PNMA5Q96PV4 448 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 RTP3Q9BQQ7 232 aa8.26□□□□□ -1.09
RBM39-238ENST00000493853 PAAF1Q9BRP4 392 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms