RNA–Protein interactions for RNA: ENST00000493726.1

LRCH3-218, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 733 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-218ENST00000493726 ATP8B4Q8TF62 1192 aa8.57□□□□□ -1.04
LRCH3-218ENST00000493726 TNPO1Q92973 898 aaKnown RBP8.57□□□□□ -1.04
LRCH3-218ENST00000493726 TOP1MTQ969P6 601 aa8.57□□□□□ -1.04
LRCH3-218ENST00000493726 CEP89Q96ST8 783 aa8.57□□□□□ -1.04
LRCH3-218ENST00000493726 RAD9AQ99638 391 aa8.57□□□□□ -1.04
LRCH3-218ENST00000493726 SLC28A3Q9HAS3 691 aa8.57□□□□□ -1.04
LRCH3-218ENST00000493726 VPS54Q9P1Q0 977 aa8.57□□□□□ -1.04
LRCH3-218ENST00000493726 EBF1Q9UH73 591 aa8.57□□□□□ -1.04
LRCH3-218ENST00000493726 GGT7Q9UJ14 662 aa8.57□□□□□ -1.04
LRCH3-218ENST00000493726 KAT6AQ92794 2004 aa8.57□□□□□ -1.04
LRCH3-218ENST00000493726 TTC3P53804 2025 aa8.56□□□□□ -1.04
LRCH3-218ENST00000493726 RGS13O14921 159 aa8.56□□□□□ -1.04
LRCH3-218ENST00000493726 MSH4O15457 936 aa8.56□□□□□ -1.04
LRCH3-218ENST00000493726 HBP1O60381 514 aa8.56□□□□□ -1.04
LRCH3-218ENST00000493726 GREM1O60565 184 aa8.56□□□□□ -1.04
LRCH3-218ENST00000493726 STBD1O95210 358 aa8.56□□□□□ -1.04
LRCH3-218ENST00000493726 FOSL2P15408 326 aa8.56□□□□□ -1.04
LRCH3-218ENST00000493726 CFPP27918 469 aa8.56□□□□□ -1.04
LRCH3-218ENST00000493726 AK2P54819 239 aa8.56□□□□□ -1.04
LRCH3-218ENST00000493726 ERVK-21P61565 698 aa8.56□□□□□ -1.04
LRCH3-218ENST00000493726 TEKQ02763 1124 aa8.56□□□□□ -1.04
LRCH3-218ENST00000493726 SSRP1Q08945 709 aaKnown RBP8.56□□□□□ -1.04
LRCH3-218ENST00000493726 CLEC16AQ2KHT3 1053 aa8.56□□□□□ -1.04
LRCH3-218ENST00000493726 UTP14CQ5TAP6 766 aaKnown RBP8.56□□□□□ -1.04
LRCH3-218ENST00000493726 BLIDQ8IZY5 108 aa8.56□□□□□ -1.04
LRCH3-218ENST00000493726 NME8Q8N427 588 aa8.56□□□□□ -1.04
LRCH3-218ENST00000493726 PDZD8Q8NEN9 1154 aa8.56□□□□□ -1.04
LRCH3-218ENST00000493726 RASGRP4Q8TDF6 673 aa8.56□□□□□ -1.04
LRCH3-218ENST00000493726 GTF3C6Q969F1 213 aa8.56□□□□□ -1.04
LRCH3-218ENST00000493726 PPP1R16BQ96T49 567 aa8.56□□□□□ -1.04
LRCH3-218ENST00000493726 FTOQ9C0B1 505 aaKnown RBP eCLIP8.56□□□□□ -1.04
LRCH3-218ENST00000493726 EPB41L4BQ9H329 900 aa8.56□□□□□ -1.04
LRCH3-218ENST00000493726 PRDM12Q9H4Q4 367 aa8.56□□□□□ -1.04
LRCH3-218ENST00000493726 KCNMB3Q9NPA1 279 aa8.56□□□□□ -1.04
LRCH3-218ENST00000493726 UBP1Q9NZI7 540 aa8.56□□□□□ -1.04
LRCH3-218ENST00000493726 ADAMTS1Q9UHI8 967 aa8.56□□□□□ -1.04
LRCH3-218ENST00000493726 PCDHA10Q9Y5I2 948 aa8.56□□□□□ -1.04
LRCH3-218ENST00000493726 RALGAPA2Q2PPJ7 1873 aa8.55□□□□□ -1.04
LRCH3-218ENST00000493726 LCHNA4D1U4 455 aa8.55□□□□□ -1.04
LRCH3-218ENST00000493726 LINC01553A4QN01 128 aa8.55□□□□□ -1.04
LRCH3-218ENST00000493726 EPOPA6NHQ4 379 aa8.55□□□□□ -1.04
LRCH3-218ENST00000493726 CDKL5O76039 1030 aa8.55□□□□□ -1.04
LRCH3-218ENST00000493726 C22orf31O95567 290 aa8.55□□□□□ -1.04
LRCH3-218ENST00000493726 CENPBP07199 599 aaPredicted RBP8.55□□□□□ -1.04
LRCH3-218ENST00000493726 SFNP31947 248 aa8.55□□□□□ -1.04
LRCH3-218ENST00000493726 GALK1P51570 392 aa8.55□□□□□ -1.04
LRCH3-218ENST00000493726 MRPS6P82932 125 aaKnown RBP8.55□□□□□ -1.04
LRCH3-218ENST00000493726 AKAP17AQ02040 695 aaKnown RBP8.55□□□□□ -1.04
LRCH3-218ENST00000493726 SP4Q02446 784 aa8.55□□□□□ -1.04
LRCH3-218ENST00000493726 ST3GAL1Q11201 340 aa8.55□□□□□ -1.04
LRCH3-218ENST00000493726 MRPL58Q14197 206 aaKnown RBP8.55□□□□□ -1.04
LRCH3-218ENST00000493726 TARBP2Q15633 366 aaKnown RBP8.55□□□□□ -1.04
LRCH3-218ENST00000493726 ME3Q16798 604 aa8.55□□□□□ -1.04
LRCH3-218ENST00000493726 ZNF484Q5JVG2 852 aa8.55□□□□□ -1.04
LRCH3-218ENST00000493726 OVOS1Q6IE37 1185 aa8.55□□□□□ -1.04
LRCH3-218ENST00000493726 MIS18BP1Q6P0N0 1132 aa8.55□□□□□ -1.04
LRCH3-218ENST00000493726 CPLX2Q6PUV4 134 aaKnown RBP8.55□□□□□ -1.04
LRCH3-218ENST00000493726 MTHFD1LQ6UB35 978 aa8.55□□□□□ -1.04
LRCH3-218ENST00000493726 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.55□□□□□ -1.048e-7■■■■□ 21.3
LRCH3-218ENST00000493726 TSHZ1Q6ZSZ6 1077 aa8.55□□□□□ -1.04
LRCH3-218ENST00000493726 KIAA0319LQ8IZA0 1049 aa8.55□□□□□ -1.04
LRCH3-218ENST00000493726 NSUN7Q8NE18 718 aaKnown RBP8.55□□□□□ -1.04
LRCH3-218ENST00000493726 TBCKQ8TEA7 893 aa8.55□□□□□ -1.04
LRCH3-218ENST00000493726 LINC01599Q8WXQ3 324 aa8.55□□□□□ -1.04
LRCH3-218ENST00000493726 SEPT8Q92599 483 aa8.55□□□□□ -1.04
LRCH3-218ENST00000493726 GLG1Q92896 1179 aa8.55□□□□□ -1.04
LRCH3-218ENST00000493726 ZNF689Q96CS4 500 aaPredicted RBP8.55□□□□□ -1.04
LRCH3-218ENST00000493726 AIFM3Q96NN9 605 aa8.55□□□□□ -1.04
LRCH3-218ENST00000493726 ZNF577Q9BSK1 485 aa8.55□□□□□ -1.04
LRCH3-218ENST00000493726 LRRC3Q9BY71 257 aa8.55□□□□□ -1.04
LRCH3-218ENST00000493726 IFIH1Q9BYX4 1025 aaKnown RBP8.55□□□□□ -1.04
LRCH3-218ENST00000493726 AZI2Q9H6S1 392 aa8.55□□□□□ -1.04
LRCH3-218ENST00000493726 INSL6Q9Y581 213 aa8.55□□□□□ -1.04
LRCH3-218ENST00000493726 MTCH2Q9Y6C9 303 aa8.55□□□□□ -1.04
LRCH3-218ENST00000493726 IGKV6-21A0A0C4DH24 114 aa8.54□□□□□ -1.04
LRCH3-218ENST00000493726 KIF28PB7ZC32 967 aa8.54□□□□□ -1.04
LRCH3-218ENST00000493726 C5orf67F2Z3F1 127 aa8.54□□□□□ -1.04
LRCH3-218ENST00000493726 CPLX1O14810 134 aa8.54□□□□□ -1.04
LRCH3-218ENST00000493726 TBX3O15119 743 aa8.54□□□□□ -1.04
LRCH3-218ENST00000493726 LARGE1O95461 756 aa8.54□□□□□ -1.04
LRCH3-218ENST00000493726 MARK3P27448 753 aa8.54□□□□□ -1.04
LRCH3-218ENST00000493726 KCNJ6P48051 423 aa8.54□□□□□ -1.04
LRCH3-218ENST00000493726 SPIRE1Q08AE8 756 aa8.54□□□□□ -1.04
LRCH3-218ENST00000493726 PPP2R5CQ13362 524 aa8.54□□□□□ -1.04
LRCH3-218ENST00000493726 SEZ6Q53EL9 994 aa8.54□□□□□ -1.04
LRCH3-218ENST00000493726 PRR16Q569H4 304 aa8.54□□□□□ -1.04
LRCH3-218ENST00000493726 LCE1DQ5T752 114 aa8.54□□□□□ -1.04
LRCH3-218ENST00000493726 FAM160B1Q5W0V3 765 aa8.54□□□□□ -1.04
LRCH3-218ENST00000493726 GK5Q6ZS86 529 aa8.54□□□□□ -1.04
LRCH3-218ENST00000493726 RSPH3Q86UC2 560 aa8.54□□□□□ -1.04
LRCH3-218ENST00000493726 RTN4RL1Q86UN2 441 aaPredicted RBP8.54□□□□□ -1.04
LRCH3-218ENST00000493726 DNAJB3Q8WWF6 145 aa8.54□□□□□ -1.04
LRCH3-218ENST00000493726 SAMD11Q96NU1 681 aa8.54□□□□□ -1.04
LRCH3-218ENST00000493726 AGO3Q9H9G7 860 aaKnown RBP8.54□□□□□ -1.04
LRCH3-218ENST00000493726 ZNF302Q9NR11 478 aa8.54□□□□□ -1.04
LRCH3-218ENST00000493726 PRRC2BQ5JSZ5 2229 aaKnown RBP8.54□□□□□ -1.04
LRCH3-218ENST00000493726 MYH9P35579 1960 aaKnown RBP8.53□□□□□ -1.04
LRCH3-218ENST00000493726 ENPP3O14638 875 aa8.53□□□□□ -1.04
LRCH3-218ENST00000493726 GPR32O75388 356 aa8.53□□□□□ -1.04
LRCH3-218ENST00000493726 TDP2O95551 362 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms