RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 SLC47A2Q86VL8 602 aa13.54□□□□□ -0.24
VPS52-220ENST00000493674 C7orf61Q8IZ16 206 aa13.54□□□□□ -0.24
VPS52-220ENST00000493674 TTC39CQ8N584 583 aa13.54□□□□□ -0.24
VPS52-220ENST00000493674 RBBP8NLQ8NC74 664 aaPredicted RBP13.54□□□□□ -0.24
VPS52-220ENST00000493674 WHAMMQ8TF30 809 aa13.54□□□□□ -0.24
VPS52-220ENST00000493674 SLC20A1Q8WUM9 679 aa13.54□□□□□ -0.24
VPS52-220ENST00000493674 PPP1R13BQ96KQ4 1090 aa13.54□□□□□ -0.24
VPS52-220ENST00000493674 UROC1Q96N76 676 aa13.54□□□□□ -0.24
VPS52-220ENST00000493674 PLXNA4Q9HCM2 1894 aa13.54□□□□□ -0.24
VPS52-220ENST00000493674 CCP110O43303 1012 aa13.53□□□□□ -0.24
VPS52-220ENST00000493674 AKR1B10O60218 316 aa13.53□□□□□ -0.24
VPS52-220ENST00000493674 B4GALT3O60512 393 aa13.53□□□□□ -0.24
VPS52-220ENST00000493674 TACC1O75410 805 aa13.53□□□□□ -0.24
VPS52-220ENST00000493674 PFKMP08237 780 aa13.53□□□□□ -0.24
VPS52-220ENST00000493674 WEE2P0C1S8 567 aa13.53□□□□□ -0.24
VPS52-220ENST00000493674 KRT5P13647 590 aa13.53□□□□□ -0.24
VPS52-220ENST00000493674 PAX3P23760 479 aa13.53□□□□□ -0.24
VPS52-220ENST00000493674 RAP1GAPP47736 663 aa13.53□□□□□ -0.24
VPS52-220ENST00000493674 BPIFB4P59827 614 aa13.53□□□□□ -0.24
VPS52-220ENST00000493674 LILRA4P59901 499 aa13.53□□□□□ -0.24
VPS52-220ENST00000493674 TNNC1P63316 161 aa13.53□□□□□ -0.24
VPS52-220ENST00000493674 FMO1Q01740 532 aa13.53□□□□□ -0.24
VPS52-220ENST00000493674 CDR2Q01850 454 aa13.53□□□□□ -0.24
VPS52-220ENST00000493674 GFPT1Q06210 699 aaPredicted RBP13.53□□□□□ -0.24
VPS52-220ENST00000493674 UPP1Q16831 310 aa13.53□□□□□ -0.24
VPS52-220ENST00000493674 SV2CQ496J9 727 aa13.53□□□□□ -0.24
VPS52-220ENST00000493674 NOMO2Q5JPE7 1267 aa13.53□□□□□ -0.24
VPS52-220ENST00000493674 TMEM270Q6UE05 265 aa13.53□□□□□ -0.24
VPS52-220ENST00000493674 CD300LGQ6UXG3 332 aa13.53□□□□□ -0.24
VPS52-220ENST00000493674 SCARA5Q6ZMJ2 495 aa13.53□□□□□ -0.24
VPS52-220ENST00000493674 ZNF677Q86XU0 584 aa13.53□□□□□ -0.24
VPS52-220ENST00000493674 NPAS4Q8IUM7 802 aa13.53□□□□□ -0.24
VPS52-220ENST00000493674 RNF169Q8NCN4 708 aa13.53□□□□□ -0.24
VPS52-220ENST00000493674 C3orf58Q8NDZ4 430 aa13.53□□□□□ -0.24
VPS52-220ENST00000493674 AGPAT1Q99943 283 aa13.53□□□□□ -0.24
VPS52-220ENST00000493674 ACP6Q9NPH0 428 aa13.53□□□□□ -0.24
VPS52-220ENST00000493674 RNF216Q9NWF9 866 aaPredicted RBP13.53□□□□□ -0.24
VPS52-220ENST00000493674 NXF1Q9UBU9 619 aaKnown RBP13.53□□□□□ -0.24
VPS52-220ENST00000493674 NAGPAQ9UK23 515 aa13.53□□□□□ -0.24
VPS52-220ENST00000493674 PCDHB4Q9Y5E5 795 aa13.53□□□□□ -0.24
VPS52-220ENST00000493674 MYO16Q9Y6X6 1858 aa13.53□□□□□ -0.24
VPS52-220ENST00000493674 ABHD14A-ACY1A0A1B0GW23 586 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 KPNA7A9QM74 516 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 TMEM189-UBE2V1I3L0A0 370 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 PODXLO00592 558 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 PJA2O43164 708 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 ZSCAN12O43309 604 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 HOXA2O43364 376 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 POMCP01189 267 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 PAEPP09466 180 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 FAM163BP0C2L3 166 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 FGFR1P11362 822 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 USP8P40818 1118 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 ARHGAP25P42331 645 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 PDE6CP51160 858 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 CLCNKBP51801 687 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 VAV2P52735 878 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 RAD23BP54727 409 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 CDH8P55286 799 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 KRT83P78385 493 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 SOWAHAQ2M3V2 549 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 DEFB128Q7Z7B8 93 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 VPS36Q86VN1 386 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 PALB2Q86YC2 1186 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 TOP6BLQ8N6T0 577 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 KBTBD7Q8WVZ9 684 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 DDX27Q96GQ7 796 aaKnown RBP13.52□□□□□ -0.25
VPS52-220ENST00000493674 CASD1Q96PB1 797 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 TWNKQ96RR1 684 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 PAAF1Q9BRP4 392 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 DEF6Q9H4E7 631 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 TBC1D13Q9NVG8 400 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 KANSL3Q9P2N6 904 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 PRKAG2Q9UGJ0 569 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 ADAMTS1Q9UHI8 967 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 BARX2Q9UMQ3 279 aaPredicted RBP13.52□□□□□ -0.25
VPS52-220ENST00000493674 R3HCC1Q9Y3T6 440 aaKnown RBP13.52□□□□□ -0.25
VPS52-220ENST00000493674 NME7Q9Y5B8 376 aa13.52□□□□□ -0.25
VPS52-220ENST00000493674 RANBP2P49792 3224 aaKnown RBP13.51□□□□□ -0.25
VPS52-220ENST00000493674 ATG2AQ2TAZ0 1938 aa13.51□□□□□ -0.25
VPS52-220ENST00000493674 A0A0U1RQJ8 604 aa13.51□□□□□ -0.25
VPS52-220ENST00000493674 RCCD1A6NED2 376 aa13.51□□□□□ -0.25
VPS52-220ENST00000493674 GOLGA6L9A6NEM1 432 aa13.51□□□□□ -0.25
VPS52-220ENST00000493674 DDHD2O94830 711 aa13.51□□□□□ -0.25
VPS52-220ENST00000493674 CSF2RAP15509 400 aa13.51□□□□□ -0.25
VPS52-220ENST00000493674 RAG1P15918 1043 aa13.51□□□□□ -0.25
VPS52-220ENST00000493674 CD58P19256 250 aa13.51□□□□□ -0.25
VPS52-220ENST00000493674 IGFBP6P24592 240 aaPredicted RBP13.51□□□□□ -0.25
VPS52-220ENST00000493674 CYP27A1Q02318 531 aa13.51□□□□□ -0.25
VPS52-220ENST00000493674 IKBKEQ14164 716 aa13.51□□□□□ -0.25
VPS52-220ENST00000493674 C10orf76Q5T2E6 689 aa13.51□□□□□ -0.25
VPS52-220ENST00000493674 NYAP1Q6ZVC0 841 aa13.51□□□□□ -0.25
VPS52-220ENST00000493674 DPH6Q7L8W6 267 aa13.51□□□□□ -0.25
VPS52-220ENST00000493674 GLYCTKQ8IVS8 523 aa13.51□□□□□ -0.25
VPS52-220ENST00000493674 COLGALT2Q8IYK4 626 aa13.51□□□□□ -0.25
VPS52-220ENST00000493674 SLC4A11Q8NBS3 891 aa13.51□□□□□ -0.25
VPS52-220ENST00000493674 URGCPQ8TCY9 931 aa13.51□□□□□ -0.25
VPS52-220ENST00000493674 ATRIPQ8WXE1 791 aa13.51□□□□□ -0.25
VPS52-220ENST00000493674 PCDHB18PQ96TA0 734 aa13.51□□□□□ -0.25
VPS52-220ENST00000493674 ZSWIM1Q9BR11 485 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms