RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 TEKT4Q8WW24 435 aa7.71□□□□□ -1.17
SMARCE1-211ENST00000493660 MAIP1Q8WWC4 291 aa7.71□□□□□ -1.17
SMARCE1-211ENST00000493660 PCMTD1Q96MG8 357 aaPredicted RBP7.71□□□□□ -1.17
SMARCE1-211ENST00000493660 CORO1BQ9BR76 489 aa7.71□□□□□ -1.17
SMARCE1-211ENST00000493660 NAA15Q9BXJ9 866 aaKnown RBP7.71□□□□□ -1.17
SMARCE1-211ENST00000493660 NOD2Q9HC29 1040 aa7.71□□□□□ -1.17
SMARCE1-211ENST00000493660 CDC23Q9UJX2 597 aa7.71□□□□□ -1.17
SMARCE1-211ENST00000493660 FBXL5Q9UKA1 691 aa7.71□□□□□ -1.17
SMARCE1-211ENST00000493660 USP20Q9Y2K6 914 aa7.71□□□□□ -1.17
SMARCE1-211ENST00000493660 ASB3Q9Y575 518 aa7.71□□□□□ -1.17
SMARCE1-211ENST00000493660 ARHGAP6O43182 974 aa7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 DARSP14868 501 aaKnown RBP7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 TRIM21P19474 475 aaKnown RBP7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 RFX1P22670 979 aa7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 MATR3P43243 847 aaKnown RBP eCLIP7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 CRYBB1P53674 252 aaPredicted RBP7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 AP3M2P53677 418 aa7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 CLDN10P78369 228 aa7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 MYL7Q01449 175 aa7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 FOXD4Q12950 439 aaPredicted RBP7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 BTG3Q14201 252 aaPredicted RBP7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 LBRQ14739 615 aaKnown RBP7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 EXOC3L4Q17RC7 722 aa7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 LACTB2Q53H82 288 aaPredicted RBP7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 SMYD5Q6GMV2 418 aa7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 SERINC5Q86VE9 423 aa7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 CBWD2Q8IUF1 395 aa7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 BRSK2Q8IWQ3 736 aa7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 DNAJC5GQ8N7S2 189 aa7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 ZBTB8BQ8NAP8 495 aaPredicted RBP7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 DNAJB3Q8WWF6 145 aa7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 HAPLN2Q9GZV7 340 aa7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 FAM49AQ9H0Q0 323 aaPredicted RBP7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 MINDY3Q9H8M7 445 aa7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 PAK6Q9NQU5 681 aaPredicted RBP7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 TUBA8Q9NY65 449 aaPredicted RBP7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 CEP72Q9P209 647 aa7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 CIDEBQ9UHD4 219 aa7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 PAIP2BQ9ULR5 123 aaKnown RBP7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 PPP2R2CQ9Y2T4 447 aa7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 LUC7L2Q9Y383 392 aaKnown RBP7.71□□□□□ -1.18
SMARCE1-211ENST00000493660 GOLGA8IPA6NC78 632 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 GOLGA8JA6NMD2 632 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 M0QZ92 97 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 FAM189A1O60320 539 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 TSPAN1O60635 241 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 TPPPO94811 219 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 CCDC166P0CW27 439 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 CASP14P31944 242 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 HDAC4P56524 1084 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 PHEXP78562 749 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 MRPS6P82932 125 aaKnown RBP7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 PTK7Q13308 1070 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 DCAF4L1Q3SXM0 396 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 ZNF568Q3ZCX4 644 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 C1orf220Q5T0J3 134 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 GDF6Q6KF10 455 aaPredicted RBP7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 C6orf89Q6UWU4 347 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 CACTIN-AS1Q8N1I8 211 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 SLC43A3Q8NBI5 491 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 COG1Q8WTW3 980 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 VTI1AQ96AJ9 217 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 STAMBPL1Q96FJ0 436 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 ZBTB45Q96K62 511 aaPredicted RBP7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 GLT1D1Q96MS3 346 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 ZNF570Q96NI8 536 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 DNAJC7Q99615 494 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 FAM213AQ9BRX8 229 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 LSM14BQ9BX40 385 aaKnown RBP7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 EPN3Q9H201 632 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 MMRN2Q9H8L6 949 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 TMEM8AQ9HCN3 771 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 ANKFY1Q9P2R3 1169 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 TSKSQ9UJT2 592 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 TMED5Q9Y3A6 229 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 TRPV2Q9Y5S1 764 aa7.7□□□□□ -1.18
SMARCE1-211ENST00000493660 TTC26A0AVF1 554 aa7.69□□□□□ -1.18
SMARCE1-211ENST00000493660 KBTBD13C9JR72 458 aa7.69□□□□□ -1.18
SMARCE1-211ENST00000493660 DNM1LO00429 736 aa7.69□□□□□ -1.18
SMARCE1-211ENST00000493660 TIMM44O43615 452 aa7.69□□□□□ -1.18
SMARCE1-211ENST00000493660 TMCC1O94876 653 aa7.69□□□□□ -1.18
SMARCE1-211ENST00000493660 IL18RAPO95256 599 aa7.69□□□□□ -1.18
SMARCE1-211ENST00000493660 ANP32DO95626 131 aa7.69□□□□□ -1.18
SMARCE1-211ENST00000493660 TRIM49P0CI25 452 aa7.69□□□□□ -1.18
SMARCE1-211ENST00000493660 TRIM49CP0CI26 452 aa7.69□□□□□ -1.18
SMARCE1-211ENST00000493660 GHRP10912 638 aa7.69□□□□□ -1.18
SMARCE1-211ENST00000493660 KRT9P35527 623 aa7.69□□□□□ -1.18
SMARCE1-211ENST00000493660 MXI1P50539 228 aa7.69□□□□□ -1.18
SMARCE1-211ENST00000493660 FXR1P51114 621 aaKnown RBP eCLIP7.69□□□□□ -1.18
SMARCE1-211ENST00000493660 MXRA7P84157 204 aa7.69□□□□□ -1.18
SMARCE1-211ENST00000493660 ITGA7Q13683 1181 aa7.69□□□□□ -1.18
SMARCE1-211ENST00000493660 KIZQ2M2Z5 673 aa7.69□□□□□ -1.18
SMARCE1-211ENST00000493660 SGSM1Q2NKQ1 1148 aa7.69□□□□□ -1.18
SMARCE1-211ENST00000493660 TSR1Q2NL82 804 aaKnown RBP7.69□□□□□ -1.18
SMARCE1-211ENST00000493660 SLC9C1Q4G0N8 1177 aa7.69□□□□□ -1.18
SMARCE1-211ENST00000493660 NAA35Q5VZE5 725 aa7.69□□□□□ -1.18
SMARCE1-211ENST00000493660 CCDC155Q8N6L0 562 aa7.69□□□□□ -1.18
SMARCE1-211ENST00000493660 RDH13Q8NBN7 331 aa7.69□□□□□ -1.18
SMARCE1-211ENST00000493660 ZSWIM2Q8NEG5 633 aa7.69□□□□□ -1.18
SMARCE1-211ENST00000493660 PLEKHO2Q8TD55 490 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms