RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 SLC7A14Q8TBB6 771 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 ZNF560Q96MR9 790 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 TIGD1Q96MW7 591 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 FNBP1Q96RU3 617 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 GTPBP4Q9BZE4 634 aaKnown RBP7.53□□□□□ -1.2
TOP3A-207ENST00000493648 EPHX3Q9H6B9 360 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 CYP4F11Q9HBI6 524 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 WDR6Q9NNW5 1121 aaKnown RBP7.53□□□□□ -1.2
TOP3A-207ENST00000493648 INTS13Q9NVM9 706 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.53□□□□□ -1.2
TOP3A-207ENST00000493648 AFF4Q9UHB7 1163 aaKnown RBP7.53□□□□□ -1.2
TOP3A-207ENST00000493648 CDH22Q9UJ99 828 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 ITGA11Q9UKX5 1188 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 POLIQ9UNA4 740 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 A0A0C4DFX4 3053 aa7.53□□□□□ -1.2
TOP3A-207ENST00000493648 WDR27A2RRH5 827 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 C2CD4DB7Z1M9 353 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 CCL16O15467 120 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 HUS1O60921 280 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 LRG1P02750 347 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 POU2F2P09086 479 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 DLATP10515 647 aaKnown RBP7.52□□□□□ -1.21
TOP3A-207ENST00000493648 PTPN2P17706 415 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 RPL13P26373 211 aaKnown RBP7.52□□□□□ -1.21
TOP3A-207ENST00000493648 POLR2BP30876 1174 aaKnown RBP7.52□□□□□ -1.21
TOP3A-207ENST00000493648 GBP2P32456 591 aaPredicted RBP7.52□□□□□ -1.21
TOP3A-207ENST00000493648 AP3M2P53677 418 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 WNT7BP56706 349 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 CYP24A1Q07973 514 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 ADCY1Q08828 1119 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 BFSP1Q12934 665 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 MYO1EQ12965 1108 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 GPR17Q13304 367 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 SNW1Q13573 536 aaKnown RBP7.52□□□□□ -1.21
TOP3A-207ENST00000493648 PSMD6Q15008 389 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 RNF19BQ6ZMZ0 732 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 GRASPQ7Z6J2 395 aaPredicted RBP7.52□□□□□ -1.21
TOP3A-207ENST00000493648 SLC9A9Q8IVB4 645 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 ELOA2Q8IYF1 753 aaPredicted RBP7.52□□□□□ -1.21
TOP3A-207ENST00000493648 TCEAL8Q8IYN2 117 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 GUF1Q8N442 669 aaKnown RBP7.52□□□□□ -1.21
TOP3A-207ENST00000493648 LRRC52Q8N7C0 313 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 C1orf127Q8N9H9 656 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 TMEM174Q8WUU8 243 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 KHSRPQ92945 711 aaKnown RBP eCLIP7.52□□□□□ -1.21
TOP3A-207ENST00000493648 CCDC127Q96BQ5 260 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 ZNF707Q96C28 371 aaPredicted RBP7.52□□□□□ -1.21
TOP3A-207ENST00000493648 BORCS6Q96GS4 357 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 MFSD14AQ96MC6 490 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 ZNF512Q96ME7 567 aaPredicted RBP7.52□□□□□ -1.21
TOP3A-207ENST00000493648 GSDMAQ96QA5 445 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 MTMR12Q9C0I1 747 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 KCTD10Q9H3F6 313 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 LIMD1Q9UGP4 676 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 MUTYHQ9UIF7 546 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 MAPK8IP1Q9UQF2 711 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 FRMD4BQ9Y2L6 1034 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 NCOR1O75376 2440 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 SCN1AP35498 2009 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 CLUHO75153 1309 aa7.52□□□□□ -1.21
TOP3A-207ENST00000493648 MYO10Q9HD67 2058 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 C2orf16Q68DN1 1984 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 KINO60870 393 aaKnown RBP7.51□□□□□ -1.21
TOP3A-207ENST00000493648 GPR37L1O60883 481 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 PHACTR2O75167 634 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 SEC24AO95486 1093 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 NR3C1P04150 777 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 FSHRP23945 695 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 SMARCB1Q12824 385 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 PLD1Q13393 1074 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 TRPC3Q13507 836 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 PNOCQ13519 176 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 PTPN21Q16825 1174 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 TMEM31Q5JXX7 168 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 ZNF658Q5TYW1 1059 aaPredicted RBP7.51□□□□□ -1.21
TOP3A-207ENST00000493648 WSCD1Q658N2 575 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 LMBRD2Q68DH5 695 aaPredicted RBP7.51□□□□□ -1.21
TOP3A-207ENST00000493648 IQCEQ6IPM2 695 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 DPH6Q7L8W6 267 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 TRAPPC11Q7Z392 1133 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 DCP1BQ8IZD4 617 aaKnown RBP7.51□□□□□ -1.21
TOP3A-207ENST00000493648 TMEM86AQ8N2M4 240 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 ELMOD1Q8N336 334 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 OR5B17Q8NGF7 314 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 FEZF2Q8TBJ5 459 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 EDAQ92838 391 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 SMARCE1Q969G3 411 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 HPDLQ96IR7 371 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 PHF12Q96QT6 1004 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 CGRRF1Q99675 332 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 DMAC2Q9NW81 257 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 GDAP2Q9NXN4 497 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 TRAF3IP3Q9Y228 551 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 INSL5Q9Y5Q6 135 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 SNX9Q9Y5X1 595 aa7.51□□□□□ -1.21
TOP3A-207ENST00000493648 ZFP37Q9Y6Q3 630 aaPredicted RBP7.51□□□□□ -1.21
TOP3A-207ENST00000493648 ZNF197O14709 1029 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 CST3P01034 146 aaPredicted RBP7.5□□□□□ -1.21
TOP3A-207ENST00000493648 FAM163BP0C2L3 166 aa7.5□□□□□ -1.21
TOP3A-207ENST00000493648 OR4Q2P0C623 313 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms