RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 MOSPD3O75425 235 aa18.01■□□□□ 0.47
PTPRU-208ENST00000493601 VNN2O95498 520 aa18.01■□□□□ 0.47
PTPRU-208ENST00000493601 PSMC3P17980 439 aa18.01■□□□□ 0.47
PTPRU-208ENST00000493601 TARSP26639 723 aaKnown RBP18.01■□□□□ 0.47
PTPRU-208ENST00000493601 TXLNAP40222 546 aa18.01■□□□□ 0.47
PTPRU-208ENST00000493601 RPS9P46781 194 aaKnown RBP18.01■□□□□ 0.47
PTPRU-208ENST00000493601 ALDH1A3P47895 512 aa18.01■□□□□ 0.47
PTPRU-208ENST00000493601 ZC2HC1CQ53FD0 456 aaPredicted RBP18.01■□□□□ 0.47
PTPRU-208ENST00000493601 C9orf57Q5W0N0 161 aa18.01■□□□□ 0.47
PTPRU-208ENST00000493601 ADALQ6DHV7 355 aa18.01■□□□□ 0.47
PTPRU-208ENST00000493601 ARMCX5Q6P1M9 558 aa18.01■□□□□ 0.47
PTPRU-208ENST00000493601 VITQ6UXI7 678 aa18.01■□□□□ 0.47
PTPRU-208ENST00000493601 MAML2Q8IZL2 1156 aaPredicted RBP18.01■□□□□ 0.47
PTPRU-208ENST00000493601 ZSCAN18Q8TBC5 510 aaPredicted RBP18.01■□□□□ 0.47
PTPRU-208ENST00000493601 CLDN23Q96B33 292 aa18.01■□□□□ 0.47
PTPRU-208ENST00000493601 EPSTI1Q96J88 318 aa18.01■□□□□ 0.47
PTPRU-208ENST00000493601 SENP8Q96LD8 212 aa18.01■□□□□ 0.47
PTPRU-208ENST00000493601 ZSWIM3Q96MP5 696 aa18.01■□□□□ 0.47
PTPRU-208ENST00000493601 ASB7Q9H672 318 aa18.01■□□□□ 0.47
PTPRU-208ENST00000493601 TRPV4Q9HBA0 871 aa18.01■□□□□ 0.47
PTPRU-208ENST00000493601 TRPV5Q9NQA5 729 aa18.01■□□□□ 0.47
PTPRU-208ENST00000493601 AGO2Q9UKV8 859 aaKnown RBP18.01■□□□□ 0.47
PTPRU-208ENST00000493601 DSEQ9UL01 958 aa18.01■□□□□ 0.47
PTPRU-208ENST00000493601 CLIC4Q9Y696 253 aa18.01■□□□□ 0.47
PTPRU-208ENST00000493601 ANKRD63C9JTQ0 380 aa18■□□□□ 0.47
PTPRU-208ENST00000493601 MAN2B1O00754 1011 aa18■□□□□ 0.47
PTPRU-208ENST00000493601 NRG2O14511 850 aaPredicted RBP18■□□□□ 0.47
PTPRU-208ENST00000493601 KINO60870 393 aaKnown RBP18■□□□□ 0.47
PTPRU-208ENST00000493601 ACOT2P49753 483 aa18■□□□□ 0.47
PTPRU-208ENST00000493601 POU5F1Q01860 360 aaKnown RBP18■□□□□ 0.47
PTPRU-208ENST00000493601 DUSP4Q13115 394 aa18■□□□□ 0.47
PTPRU-208ENST00000493601 PTPAQ15257 358 aa18■□□□□ 0.47
PTPRU-208ENST00000493601 TEAD2Q15562 447 aa18■□□□□ 0.47
PTPRU-208ENST00000493601 SFR1Q86XK3 245 aa18■□□□□ 0.47
PTPRU-208ENST00000493601 SHKBP1Q8TBC3 707 aa18■□□□□ 0.47
PTPRU-208ENST00000493601 E2F7Q96AV8 911 aa18■□□□□ 0.47
PTPRU-208ENST00000493601 BORCS6Q96GS4 357 aa18■□□□□ 0.47
PTPRU-208ENST00000493601 CRISPLD1Q9H336 500 aa18■□□□□ 0.47
PTPRU-208ENST00000493601 HSFX1Q9UBD0 423 aa18■□□□□ 0.47
PTPRU-208ENST00000493601 SEL1LQ9UBV2 794 aa18■□□□□ 0.47
PTPRU-208ENST00000493601 FBXO2Q9UK22 296 aaPredicted RBP18■□□□□ 0.47
PTPRU-208ENST00000493601 ASB3Q9Y575 518 aa18■□□□□ 0.47
PTPRU-208ENST00000493601 STYXL1Q9Y6J8 313 aa18■□□□□ 0.47
PTPRU-208ENST00000493601 NUP210Q8TEM1 1887 aaPredicted RBP18■□□□□ 0.47
PTPRU-208ENST00000493601 SCN1AP35498 2009 aa17.99■□□□□ 0.47
PTPRU-208ENST00000493601 ANO9A1A5B4 782 aa17.99■□□□□ 0.47
PTPRU-208ENST00000493601 MTMR11A4FU01 709 aa17.99■□□□□ 0.47
PTPRU-208ENST00000493601 TISP43B9A030 160 aa17.99■□□□□ 0.47
PTPRU-208ENST00000493601 PIRO00625 290 aa17.99■□□□□ 0.47
PTPRU-208ENST00000493601 SPTLC1O15269 473 aa17.99■□□□□ 0.47
PTPRU-208ENST00000493601 FGF19O95750 216 aa17.99■□□□□ 0.47
PTPRU-208ENST00000493601 CYP11A1P05108 521 aa17.99■□□□□ 0.47
PTPRU-208ENST00000493601 GJA1P17302 382 aa17.99■□□□□ 0.47
PTPRU-208ENST00000493601 GDI1P31150 447 aa17.99■□□□□ 0.47
PTPRU-208ENST00000493601 CENPPQ6IPU0 288 aa17.99■□□□□ 0.47
PTPRU-208ENST00000493601 DYMQ7RTS9 669 aa17.99■□□□□ 0.47
PTPRU-208ENST00000493601 TMC8Q8IU68 726 aa17.99■□□□□ 0.47
PTPRU-208ENST00000493601 HINFPQ9BQA5 517 aa17.99■□□□□ 0.47
PTPRU-208ENST00000493601 DNAJC25Q9H1X3 360 aa17.99■□□□□ 0.47
PTPRU-208ENST00000493601 ZNF334Q9HCZ1 680 aaPredicted RBP17.99■□□□□ 0.47
PTPRU-208ENST00000493601 SRPRBQ9Y5M8 271 aaKnown RBP17.99■□□□□ 0.47
PTPRU-208ENST00000493601 EP300Q09472 2414 aaPredicted RBP17.99■□□□□ 0.47
PTPRU-208ENST00000493601 A0A1W2PRU2 124 aa17.98■□□□□ 0.47
PTPRU-208ENST00000493601 ZNF263O14978 683 aa17.98■□□□□ 0.47
PTPRU-208ENST00000493601 GAP43P17677 238 aa17.98■□□□□ 0.47
PTPRU-208ENST00000493601 VIPR2P41587 438 aa17.98■□□□□ 0.47
PTPRU-208ENST00000493601 FOXK2Q01167 660 aa17.98■□□□□ 0.47
PTPRU-208ENST00000493601 CSTF1Q05048 431 aaKnown RBP17.98■□□□□ 0.47
PTPRU-208ENST00000493601 POSTNQ15063 836 aa17.98■□□□□ 0.47
PTPRU-208ENST00000493601 RRAGBQ5VZM2 374 aa17.98■□□□□ 0.47
PTPRU-208ENST00000493601 USP49Q70CQ1 688 aa17.98■□□□□ 0.47
PTPRU-208ENST00000493601 ZNF720Q7Z2F6 126 aa17.98■□□□□ 0.47
PTPRU-208ENST00000493601 ITIH5Q86UX2 942 aa17.98■□□□□ 0.47
PTPRU-208ENST00000493601 METTL23Q86XA0 190 aa17.98■□□□□ 0.47
PTPRU-208ENST00000493601 MFSD6LQ8IWD5 586 aa17.98■□□□□ 0.47
PTPRU-208ENST00000493601 ATAD1Q8NBU5 361 aa17.98■□□□□ 0.47
PTPRU-208ENST00000493601 POMGNT1Q8WZA1 660 aa17.98■□□□□ 0.47
PTPRU-208ENST00000493601 PSMG2Q969U7 264 aa17.98■□□□□ 0.47
PTPRU-208ENST00000493601 LRRC3Q9BY71 257 aa17.98■□□□□ 0.47
PTPRU-208ENST00000493601 MRPL44Q9H9J2 332 aaKnown RBP17.98■□□□□ 0.47
PTPRU-208ENST00000493601 DPP3Q9NY33 737 aa17.98■□□□□ 0.47
PTPRU-208ENST00000493601 EXOC7Q9UPT5 735 aa17.98■□□□□ 0.47
PTPRU-208ENST00000493601 SLC27A5Q9Y2P5 690 aa17.98■□□□□ 0.47
PTPRU-208ENST00000493601 PCDHGA2Q9Y5H1 932 aa17.98■□□□□ 0.47
PTPRU-208ENST00000493601 HEPACAM2A8MVW5 462 aa17.97■□□□□ 0.47
PTPRU-208ENST00000493601 PPP1R37O75864 691 aa17.97■□□□□ 0.47
PTPRU-208ENST00000493601 IL18RAPO95256 599 aa17.97■□□□□ 0.47
PTPRU-208ENST00000493601 TAF6P49848 677 aa17.97■□□□□ 0.47
PTPRU-208ENST00000493601 RESTQ13127 1097 aa17.97■□□□□ 0.47
PTPRU-208ENST00000493601 SLC39A12Q504Y0 691 aa17.97■□□□□ 0.47
PTPRU-208ENST00000493601 SV2BQ7L1I2 683 aa17.97■□□□□ 0.47
PTPRU-208ENST00000493601 YAF2Q8IY57 180 aa17.97■□□□□ 0.47
PTPRU-208ENST00000493601 OR10T2Q8NGX3 314 aa17.97■□□□□ 0.47
PTPRU-208ENST00000493601 RUBCNQ92622 972 aa17.97■□□□□ 0.47
PTPRU-208ENST00000493601 TMEM209Q96SK2 561 aa17.97■□□□□ 0.47
PTPRU-208ENST00000493601 IER2Q9BTL4 223 aa17.97■□□□□ 0.47
PTPRU-208ENST00000493601 PRMT8Q9NR22 394 aaPredicted RBP17.97■□□□□ 0.47
PTPRU-208ENST00000493601 NDRG2Q9UN36 371 aaKnown RBP17.97■□□□□ 0.47
PTPRU-208ENST00000493601 PIAS3Q9Y6X2 628 aa17.97■□□□□ 0.47
PTPRU-208ENST00000493601 OTOGLQ3ZCN5 2332 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms