RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 CCDC110Q8TBZ0 833 aa12.34□□□□□ -0.43
HDAC4-210ENST00000493582 MKNK1Q9BUB5 465 aa12.34□□□□□ -0.43
HDAC4-210ENST00000493582 FHDC1Q9C0D6 1143 aaPredicted RBP12.34□□□□□ -0.43
HDAC4-210ENST00000493582 SENP1Q9P0U3 644 aa12.34□□□□□ -0.43
HDAC4-210ENST00000493582 SNED1Q8TER0 1413 aa12.34□□□□□ -0.43
HDAC4-210ENST00000493582 EMSYQ7Z589 1322 aa12.34□□□□□ -0.43
HDAC4-210ENST00000493582 USP17L10C9JJH3 530 aa12.34□□□□□ -0.43
HDAC4-210ENST00000493582 F8W8V4 182 aa12.34□□□□□ -0.43
HDAC4-210ENST00000493582 MAGEB3O15480 346 aa12.34□□□□□ -0.43
HDAC4-210ENST00000493582 BUD23O43709 281 aaKnown RBP12.34□□□□□ -0.43
HDAC4-210ENST00000493582 FAM13AO94988 1023 aa12.34□□□□□ -0.43
HDAC4-210ENST00000493582 BMP3P12645 472 aa12.34□□□□□ -0.43
HDAC4-210ENST00000493582 MAN1A1P33908 653 aa12.34□□□□□ -0.43
HDAC4-210ENST00000493582 EVA1CP58658 441 aa12.34□□□□□ -0.43
HDAC4-210ENST00000493582 BFSP1Q12934 665 aa12.34□□□□□ -0.43
HDAC4-210ENST00000493582 DLG1Q12959 904 aa12.34□□□□□ -0.43
HDAC4-210ENST00000493582 PDIA2Q13087 525 aaKnown RBP12.34□□□□□ -0.43
HDAC4-210ENST00000493582 LLGL2Q6P1M3 1020 aa12.34□□□□□ -0.43
HDAC4-210ENST00000493582 DUS1LQ6P1R4 473 aaKnown RBP12.34□□□□□ -0.43
HDAC4-210ENST00000493582 ANKS1BQ7Z6G8 1248 aa12.34□□□□□ -0.43
HDAC4-210ENST00000493582 SMC1BQ8NDV3 1235 aa12.34□□□□□ -0.43
HDAC4-210ENST00000493582 OR6Y1Q8NGX8 325 aa12.34□□□□□ -0.43
HDAC4-210ENST00000493582 PYDC1Q8WXC3 89 aa12.34□□□□□ -0.43
HDAC4-210ENST00000493582 OXNAD1Q96HP4 312 aaPredicted RBP12.34□□□□□ -0.43
HDAC4-210ENST00000493582 CLMNQ96JQ2 1002 aa12.34□□□□□ -0.43
HDAC4-210ENST00000493582 SUDS3Q9H7L9 328 aaPredicted RBP12.34□□□□□ -0.43
HDAC4-210ENST00000493582 ZNF287Q9HBT7 754 aa12.34□□□□□ -0.43
HDAC4-210ENST00000493582 AGPAT3Q9NRZ7 376 aa12.34□□□□□ -0.43
HDAC4-210ENST00000493582 NOCTQ9UK39 431 aaKnown RBP12.34□□□□□ -0.43
HDAC4-210ENST00000493582 MTO1Q9Y2Z2 717 aaKnown RBP12.34□□□□□ -0.43
HDAC4-210ENST00000493582 GMEB1Q9Y692 573 aa12.34□□□□□ -0.43
HDAC4-210ENST00000493582 CCDC160A6NGH7 325 aa12.33□□□□□ -0.44
HDAC4-210ENST00000493582 GOLGA8SH3BPF8 625 aa12.33□□□□□ -0.44
HDAC4-210ENST00000493582 GOLGA8MH3BSY2 632 aa12.33□□□□□ -0.44
HDAC4-210ENST00000493582 PIK3CDO00329 1044 aa12.33□□□□□ -0.44
HDAC4-210ENST00000493582 DNAJC6O75061 913 aa12.33□□□□□ -0.44
HDAC4-210ENST00000493582 HNRNPCP07910 306 aaKnown RBP eCLIP12.33□□□□□ -0.446e-11■■□□□ 13.6
HDAC4-210ENST00000493582 MAPK4P31152 587 aa12.33□□□□□ -0.44
HDAC4-210ENST00000493582 ACTR3P61158 418 aa12.33□□□□□ -0.44
HDAC4-210ENST00000493582 HPCAP84074 193 aa12.33□□□□□ -0.44
HDAC4-210ENST00000493582 FMO1Q01740 532 aa12.33□□□□□ -0.44
HDAC4-210ENST00000493582 Q4G0T1 1027 aa12.33□□□□□ -0.44
HDAC4-210ENST00000493582 SH2D4BQ5SQS7 431 aa12.33□□□□□ -0.44
HDAC4-210ENST00000493582 TBC1D9BQ66K14 1250 aa12.33□□□□□ -0.44
HDAC4-210ENST00000493582 RINT1Q6NUQ1 792 aa12.33□□□□□ -0.44
HDAC4-210ENST00000493582 TMPRSS6Q8IU80 811 aa12.33□□□□□ -0.44
HDAC4-210ENST00000493582 ULK2Q8IYT8 1036 aa12.33□□□□□ -0.44
HDAC4-210ENST00000493582 PCIF1Q9H4Z3 704 aa12.33□□□□□ -0.44
HDAC4-210ENST00000493582 C10orf71Q711Q0 1435 aa12.33□□□□□ -0.44
HDAC4-210ENST00000493582 CAMTA2O94983 1202 aa12.33□□□□□ -0.44
HDAC4-210ENST00000493582 GZMAP12544 262 aa12.33□□□□□ -0.44
HDAC4-210ENST00000493582 ATF3P18847 181 aa12.33□□□□□ -0.44
HDAC4-210ENST00000493582 ABCD1P33897 745 aa12.33□□□□□ -0.44
HDAC4-210ENST00000493582 GJC1P36383 396 aa12.33□□□□□ -0.44
HDAC4-210ENST00000493582 PPP3CAQ08209 521 aa12.33□□□□□ -0.44
HDAC4-210ENST00000493582 TMED1Q13445 227 aa12.33□□□□□ -0.44
HDAC4-210ENST00000493582 KRT72Q14CN4 511 aa12.33□□□□□ -0.44
HDAC4-210ENST00000493582 C16orf86Q6ZW13 317 aa12.33□□□□□ -0.44
HDAC4-210ENST00000493582 RPGRQ92834 1020 aaKnown RBP12.33□□□□□ -0.44
HDAC4-210ENST00000493582 GTF3C4Q9UKN8 822 aa12.33□□□□□ -0.44
HDAC4-210ENST00000493582 RABGAP1Q9Y3P9 1069 aa12.33□□□□□ -0.44
HDAC4-210ENST00000493582 TISP43B9A030 160 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 F5H6K3 240 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 TXNDC9O14530 226 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 MAGEC1O60732 1142 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 CIB2O75838 187 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 CCDC166P0CW27 439 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 KLRC2P26717 231 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 ADSSP30520 456 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 NET1Q7Z628 596 aaPredicted RBP12.32□□□□□ -0.44
HDAC4-210ENST00000493582 PDSS2Q86YH6 399 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 BBOF1Q8ND07 529 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 ERMNQ8TAM6 284 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 MTBPQ96DY7 904 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 OLFML3Q9NRN5 406 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 PSMC3IPQ9P2W1 217 aaPredicted RBP12.32□□□□□ -0.44
HDAC4-210ENST00000493582 ATF5Q9Y2D1 282 aaPredicted RBP12.32□□□□□ -0.44
HDAC4-210ENST00000493582 E5RJQ4 531 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 FDX1P10109 184 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 VCLP18206 1134 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 YY1P25490 414 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 HIRAP54198 1017 aaPredicted RBP12.32□□□□□ -0.44
HDAC4-210ENST00000493582 AQP4P55087 323 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 EPC2Q52LR7 807 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 C6orf163Q5TEZ5 329 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 CCDC174Q6PII3 467 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 RNF111Q6ZNA4 994 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 RBM44Q6ZP01 1051 aaKnown RBP12.32□□□□□ -0.44
HDAC4-210ENST00000493582 KCTD1Q719H9 257 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 SLFN12Q8IYM2 578 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 PPM1KQ8N3J5 372 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 GSTCDQ8NEC7 633 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 HAUS1Q96CS2 278 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 SPDYE16A6NNV3 312 aaPredicted RBP12.32□□□□□ -0.44
HDAC4-210ENST00000493582 VILLO15195 856 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 RAD21O60216 631 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 BGNP21810 368 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 SSTR1P30872 391 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 GALK1P51570 392 aa12.32□□□□□ -0.44
HDAC4-210ENST00000493582 KCNQ4P56696 695 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms