RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 SLC8A2Q9UPR5 921 aa15.57■□□□□ 0.08
PRPF40A-211ENST00000493468 ATG2BQ96BY7 2078 aa15.56■□□□□ 0.08
PRPF40A-211ENST00000493468 M0QZQ0 153 aa15.56■□□□□ 0.08
PRPF40A-211ENST00000493468 WNT7AO00755 349 aa15.56■□□□□ 0.08
PRPF40A-211ENST00000493468 MCF2P10911 925 aa15.56■□□□□ 0.08
PRPF40A-211ENST00000493468 PROZP22891 400 aa15.56■□□□□ 0.08
PRPF40A-211ENST00000493468 CACNB1Q02641 598 aaPredicted RBP15.56■□□□□ 0.08
PRPF40A-211ENST00000493468 YWHAHQ04917 246 aaPredicted RBP15.56■□□□□ 0.08
PRPF40A-211ENST00000493468 ZNF252P-AS1Q0IIN9 211 aa15.56■□□□□ 0.08
PRPF40A-211ENST00000493468 PLK5Q496M5 336 aa15.56■□□□□ 0.08
PRPF40A-211ENST00000493468 TMEM196Q5HYL7 178 aa15.56■□□□□ 0.08
PRPF40A-211ENST00000493468 STXBP5Q5T5C0 1151 aa15.56■□□□□ 0.08
PRPF40A-211ENST00000493468 PKN3Q6P5Z2 889 aa15.56■□□□□ 0.08
PRPF40A-211ENST00000493468 GAREM2Q75VX8 874 aa15.56■□□□□ 0.08
PRPF40A-211ENST00000493468 ERMNQ8TAM6 284 aa15.56■□□□□ 0.08
PRPF40A-211ENST00000493468 BPIFB1Q8TDL5 484 aa15.56■□□□□ 0.08
PRPF40A-211ENST00000493468 C18orf25Q96B23 403 aaPredicted RBP15.56■□□□□ 0.08
PRPF40A-211ENST00000493468 ZFYVE19Q96K21 471 aa15.56■□□□□ 0.08
PRPF40A-211ENST00000493468 YTHDC1Q96MU7 727 aaKnown RBP15.56■□□□□ 0.08
PRPF40A-211ENST00000493468 ADAM33Q9BZ11 813 aa15.56■□□□□ 0.08
PRPF40A-211ENST00000493468 SMOC1Q9H4F8 434 aa15.56■□□□□ 0.08
PRPF40A-211ENST00000493468 TMEM134Q9H6X4 195 aa15.56■□□□□ 0.08
PRPF40A-211ENST00000493468 ORC3Q9UBD5 711 aaPredicted RBP15.56■□□□□ 0.08
PRPF40A-211ENST00000493468 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.56■□□□□ 0.08
PRPF40A-211ENST00000493468 MYO16Q9Y6X6 1858 aa15.55■□□□□ 0.08
PRPF40A-211ENST00000493468 TSC2P49815 1807 aa15.55■□□□□ 0.08
PRPF40A-211ENST00000493468 OR6C75A6NL08 312 aa15.55■□□□□ 0.08
PRPF40A-211ENST00000493468 ABLIM1O14639 778 aa15.55■□□□□ 0.08
PRPF40A-211ENST00000493468 PFKFB2O60825 505 aa15.55■□□□□ 0.08
PRPF40A-211ENST00000493468 MARCKSP29966 332 aaPredicted RBP15.55■□□□□ 0.08
PRPF40A-211ENST00000493468 ALDH1A3P47895 512 aa15.55■□□□□ 0.08
PRPF40A-211ENST00000493468 PXNP49023 591 aaPredicted RBP15.55■□□□□ 0.08
PRPF40A-211ENST00000493468 MCM2P49736 904 aa15.55■□□□□ 0.08
PRPF40A-211ENST00000493468 OSTNP61366 133 aa15.55■□□□□ 0.08
PRPF40A-211ENST00000493468 GPR17Q13304 367 aa15.55■□□□□ 0.08
PRPF40A-211ENST00000493468 KARSQ15046 597 aaKnown RBP15.55■□□□□ 0.08
PRPF40A-211ENST00000493468 ARHGAP15Q53QZ3 475 aa15.55■□□□□ 0.08
PRPF40A-211ENST00000493468 DAB2IPQ5VWQ8 1189 aa15.55■□□□□ 0.08
PRPF40A-211ENST00000493468 CENPQQ7L2Z9 268 aaPredicted RBP15.55■□□□□ 0.08
PRPF40A-211ENST00000493468 TTC8Q8TAM2 541 aa15.55■□□□□ 0.08
PRPF40A-211ENST00000493468 PSMG2Q969U7 264 aa15.55■□□□□ 0.08
PRPF40A-211ENST00000493468 MRPL4Q9BYD3 311 aaKnown RBP15.55■□□□□ 0.08
PRPF40A-211ENST00000493468 DUSP15Q9H1R2 295 aaPredicted RBP15.55■□□□□ 0.08
PRPF40A-211ENST00000493468 TMEM60Q9H2L4 133 aa15.55■□□□□ 0.08
PRPF40A-211ENST00000493468 CRISPLD1Q9H336 500 aa15.55■□□□□ 0.08
PRPF40A-211ENST00000493468 PDRG1Q9NUG6 133 aa15.55■□□□□ 0.08
PRPF40A-211ENST00000493468 HSFX1Q9UBD0 423 aa15.55■□□□□ 0.08
PRPF40A-211ENST00000493468 ZNF638Q14966 1978 aaKnown RBP15.55■□□□□ 0.08
PRPF40A-211ENST00000493468 AKAP13Q12802 2813 aa15.54■□□□□ 0.08
PRPF40A-211ENST00000493468 TRDMT1O14717 391 aaKnown RBP15.54■□□□□ 0.08
PRPF40A-211ENST00000493468 MEFVO15553 781 aaPredicted RBP15.54■□□□□ 0.08
PRPF40A-211ENST00000493468 RHOBTB1O94844 696 aa15.54■□□□□ 0.08
PRPF40A-211ENST00000493468 CTDNEP1O95476 244 aa15.54■□□□□ 0.08
PRPF40A-211ENST00000493468 PRAMEF12O95522 483 aa15.54■□□□□ 0.08
PRPF40A-211ENST00000493468 AARSP49588 968 aaKnown RBP eCLIP15.54■□□□□ 0.08
PRPF40A-211ENST00000493468 TNK2Q07912 1038 aa15.54■□□□□ 0.08
PRPF40A-211ENST00000493468 GRSF1Q12849 480 aaKnown RBP eCLIP15.54■□□□□ 0.08
PRPF40A-211ENST00000493468 DUSP4Q13115 394 aa15.54■□□□□ 0.08
PRPF40A-211ENST00000493468 ELF2Q15723 593 aa15.54■□□□□ 0.08
PRPF40A-211ENST00000493468 GPR158Q5T848 1215 aa15.54■□□□□ 0.08
PRPF40A-211ENST00000493468 CENPPQ6IPU0 288 aa15.54■□□□□ 0.08
PRPF40A-211ENST00000493468 TCEAL6Q6IPX3 200 aa15.54■□□□□ 0.08
PRPF40A-211ENST00000493468 FSTL4Q6MZW2 842 aa15.54■□□□□ 0.08
PRPF40A-211ENST00000493468 MPZL3Q6UWV2 235 aa15.54■□□□□ 0.08
PRPF40A-211ENST00000493468 GATA6Q92908 595 aa15.54■□□□□ 0.08
PRPF40A-211ENST00000493468 TCEAL3Q969E4 200 aa15.54■□□□□ 0.08
PRPF40A-211ENST00000493468 ATXN3LQ9H3M9 355 aa15.54■□□□□ 0.08
PRPF40A-211ENST00000493468 THG1LQ9NWX6 298 aaKnown RBP15.54■□□□□ 0.08
PRPF40A-211ENST00000493468 ARHGAP28Q9P2N2 729 aa15.54■□□□□ 0.08
PRPF40A-211ENST00000493468 ZMYM5Q9UJ78 669 aa15.54■□□□□ 0.08
PRPF40A-211ENST00000493468 OBSL1O75147 1896 aa15.54■□□□□ 0.08
PRPF40A-211ENST00000493468 BCLAF3A2AJT9 711 aaKnown RBP15.53■□□□□ 0.08
PRPF40A-211ENST00000493468 CEACAM1P13688 526 aa15.53■□□□□ 0.08
PRPF40A-211ENST00000493468 FDPSP14324 419 aaKnown RBP15.53■□□□□ 0.08
PRPF40A-211ENST00000493468 CSRP1P21291 193 aaKnown RBP15.53■□□□□ 0.08
PRPF40A-211ENST00000493468 GABRR2P28476 465 aa15.53■□□□□ 0.08
PRPF40A-211ENST00000493468 LRPAP1P30533 357 aa15.53■□□□□ 0.08
PRPF40A-211ENST00000493468 FOXC1Q12948 553 aa15.53■□□□□ 0.08
PRPF40A-211ENST00000493468 MYBPC2Q14324 1141 aa15.53■□□□□ 0.08
PRPF40A-211ENST00000493468 HAUS3Q68CZ6 603 aa15.53■□□□□ 0.08
PRPF40A-211ENST00000493468 DNAJB7Q7Z6W7 309 aaPredicted RBP15.53■□□□□ 0.08
PRPF40A-211ENST00000493468 ITIH5Q86UX2 942 aa15.53■□□□□ 0.08
PRPF40A-211ENST00000493468 PGLYRP2Q96PD5 576 aa15.53■□□□□ 0.08
PRPF40A-211ENST00000493468 TASP1Q9H6P5 420 aa15.53■□□□□ 0.08
PRPF40A-211ENST00000493468 DSPP15924 2871 aaKnown RBP15.53■□□□□ 0.08
PRPF40A-211ENST00000493468 DMXL2Q8TDJ6 3036 aa15.52■□□□□ 0.08
PRPF40A-211ENST00000493468 LNP1A1A4G5 178 aa15.52■□□□□ 0.08
PRPF40A-211ENST00000493468 MTMR11A4FU01 709 aa15.52■□□□□ 0.08
PRPF40A-211ENST00000493468 SRRM3A6NNA2 597 aaPredicted RBP15.52■□□□□ 0.08
PRPF40A-211ENST00000493468 C4orf47A7E2U8 309 aa15.52■□□□□ 0.08
PRPF40A-211ENST00000493468 BTBD18B2RXH4 712 aa15.52■□□□□ 0.08
PRPF40A-211ENST00000493468 GIPC1O14908 333 aa15.52■□□□□ 0.08
PRPF40A-211ENST00000493468 CAVIN2O95810 425 aa15.52■□□□□ 0.08
PRPF40A-211ENST00000493468 OR4Q2P0C623 313 aa15.52■□□□□ 0.08
PRPF40A-211ENST00000493468 NPTX2P47972 431 aa15.52■□□□□ 0.08
PRPF40A-211ENST00000493468 AMPD2Q01433 879 aa15.52■□□□□ 0.08
PRPF40A-211ENST00000493468 ORC2Q13416 577 aaPredicted RBP15.52■□□□□ 0.08
PRPF40A-211ENST00000493468 SH3PXD2AQ5TCZ1 1133 aa15.52■□□□□ 0.08
PRPF40A-211ENST00000493468 TAS1R3Q7RTX0 852 aa15.52■□□□□ 0.08
PRPF40A-211ENST00000493468 DIS3L2Q8IYB7 885 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms