RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 FAM13BQ9NYF5 915 aa12.42□□□□□ -0.42
LRTM1-202ENST00000493075 CEP72Q9P209 647 aa12.42□□□□□ -0.42
LRTM1-202ENST00000493075 PCDHA7Q9UN72 937 aa12.42□□□□□ -0.42
LRTM1-202ENST00000493075 MTCL1Q9Y4B5 1905 aaKnown RBP12.42□□□□□ -0.42
LRTM1-202ENST00000493075 KPNA7A9QM74 516 aa12.41□□□□□ -0.42
LRTM1-202ENST00000493075 CYB561D2O14569 222 aa12.41□□□□□ -0.42
LRTM1-202ENST00000493075 EIF3DO15371 548 aaKnown RBP eCLIP12.41□□□□□ -0.42
LRTM1-202ENST00000493075 POLR2DO15514 142 aaKnown RBP12.41□□□□□ -0.42
LRTM1-202ENST00000493075 PI15O43692 258 aa12.41□□□□□ -0.42
LRTM1-202ENST00000493075 VNN2O95498 520 aa12.41□□□□□ -0.42
LRTM1-202ENST00000493075 ME1P48163 572 aa12.41□□□□□ -0.42
LRTM1-202ENST00000493075 SNRPFP62306 86 aaKnown RBP12.41□□□□□ -0.42
LRTM1-202ENST00000493075 GPC5P78333 572 aa12.41□□□□□ -0.42
LRTM1-202ENST00000493075 PFKPQ01813 784 aa12.41□□□□□ -0.42
LRTM1-202ENST00000493075 SMARCB1Q12824 385 aa12.41□□□□□ -0.42
LRTM1-202ENST00000493075 DUSP4Q13115 394 aa12.41□□□□□ -0.42
LRTM1-202ENST00000493075 RESP18Q5W5W9 173 aa12.41□□□□□ -0.42
LRTM1-202ENST00000493075 EPM2AIP1Q7L775 607 aaPredicted RBP12.41□□□□□ -0.42
LRTM1-202ENST00000493075 ALYREFQ86V81 257 aaKnown RBP12.41□□□□□ -0.42
LRTM1-202ENST00000493075 METTL23Q86XA0 190 aa12.41□□□□□ -0.42
LRTM1-202ENST00000493075 THEM5Q8N1Q8 247 aa12.41□□□□□ -0.42
LRTM1-202ENST00000493075 GPD1LQ8N335 351 aa12.41□□□□□ -0.42
LRTM1-202ENST00000493075 ZNF507Q8TCN5 953 aa12.41□□□□□ -0.42
LRTM1-202ENST00000493075 ELSPBP1Q96BH3 223 aa12.41□□□□□ -0.42
LRTM1-202ENST00000493075 MCRS1Q96EZ8 462 aa12.41□□□□□ -0.42
LRTM1-202ENST00000493075 SHDQ96IW2 340 aa12.41□□□□□ -0.42
LRTM1-202ENST00000493075 CBWD1Q9BRT8 395 aa12.41□□□□□ -0.42
LRTM1-202ENST00000493075 GPR88Q9GZN0 384 aa12.41□□□□□ -0.42
LRTM1-202ENST00000493075 KIAA1586Q9HCI6 787 aa12.41□□□□□ -0.42
LRTM1-202ENST00000493075 RBAKQ9NYW8 714 aaPredicted RBP12.41□□□□□ -0.42
LRTM1-202ENST00000493075 ASB3Q9Y575 518 aa12.41□□□□□ -0.42
LRTM1-202ENST00000493075 VWA8A3KMH1 1905 aa12.41□□□□□ -0.42
LRTM1-202ENST00000493075 C2orf16Q68DN1 1984 aa12.41□□□□□ -0.42
LRTM1-202ENST00000493075 ZNF318Q5VUA4 2279 aa12.4□□□□□ -0.42
LRTM1-202ENST00000493075 PVALEFA0A1B0GWK0 134 aa12.4□□□□□ -0.42
LRTM1-202ENST00000493075 OR4Q2P0C623 313 aa12.4□□□□□ -0.42
LRTM1-202ENST00000493075 CEBPBP17676 345 aa12.4□□□□□ -0.42
LRTM1-202ENST00000493075 ALDH1A3P47895 512 aa12.4□□□□□ -0.42
LRTM1-202ENST00000493075 TUFMP49411 452 aaKnown RBP12.4□□□□□ -0.42
LRTM1-202ENST00000493075 MRE11P49959 708 aa12.4□□□□□ -0.42
LRTM1-202ENST00000493075 EPHB3P54753 998 aa12.4□□□□□ -0.42
LRTM1-202ENST00000493075 STARD6P59095 220 aa12.4□□□□□ -0.42
LRTM1-202ENST00000493075 ASIC1P78348 528 aa12.4□□□□□ -0.42
LRTM1-202ENST00000493075 PRKCQQ04759 706 aa12.4□□□□□ -0.42
LRTM1-202ENST00000493075 DNM1Q05193 864 aaKnown RBP12.4□□□□□ -0.42
LRTM1-202ENST00000493075 EHHADHQ08426 723 aa12.4□□□□□ -0.42
LRTM1-202ENST00000493075 PKP1Q13835 747 aa12.4□□□□□ -0.42
LRTM1-202ENST00000493075 SURF1Q15526 300 aa12.4□□□□□ -0.42
LRTM1-202ENST00000493075 FOXD4L6Q3SYB3 417 aaPredicted RBP12.4□□□□□ -0.42
LRTM1-202ENST00000493075 SV2CQ496J9 727 aa12.4□□□□□ -0.42
LRTM1-202ENST00000493075 FOXD4L3Q6VB84 417 aaPredicted RBP12.4□□□□□ -0.42
LRTM1-202ENST00000493075 UNC13DQ70J99 1090 aa12.4□□□□□ -0.42
LRTM1-202ENST00000493075 CCDC105Q8IYK2 499 aa12.4□□□□□ -0.42
LRTM1-202ENST00000493075 LRRC52Q8N7C0 313 aa12.4□□□□□ -0.42
LRTM1-202ENST00000493075 ZSWIM2Q8NEG5 633 aa12.4□□□□□ -0.42
LRTM1-202ENST00000493075 C2orf15Q8WU43 125 aaKnown RBP12.4□□□□□ -0.42
LRTM1-202ENST00000493075 ING5Q8WYH8 240 aa12.4□□□□□ -0.42
LRTM1-202ENST00000493075 SAAL1Q96ER3 474 aa12.4□□□□□ -0.42
LRTM1-202ENST00000493075 ZNF560Q96MR9 790 aa12.4□□□□□ -0.42
LRTM1-202ENST00000493075 PGLYRP2Q96PD5 576 aa12.4□□□□□ -0.42
LRTM1-202ENST00000493075 ZCWPW1Q9H0M4 648 aa12.4□□□□□ -0.42
LRTM1-202ENST00000493075 ASAH2Q9NR71 780 aa12.4□□□□□ -0.42
LRTM1-202ENST00000493075 ARHGEF3Q9NR81 526 aa12.4□□□□□ -0.42
LRTM1-202ENST00000493075 CA14Q9ULX7 337 aa12.4□□□□□ -0.42
LRTM1-202ENST00000493075 YIPF1Q9Y548 306 aa12.4□□□□□ -0.42
LRTM1-202ENST00000493075 MTMR11A4FU01 709 aa12.39□□□□□ -0.43
LRTM1-202ENST00000493075 ZNF233A6NK53 670 aa12.39□□□□□ -0.43
LRTM1-202ENST00000493075 STK25O00506 426 aa12.39□□□□□ -0.43
LRTM1-202ENST00000493075 MOSPD3O75425 235 aa12.39□□□□□ -0.43
LRTM1-202ENST00000493075 HOXD13P35453 343 aa12.39□□□□□ -0.43
LRTM1-202ENST00000493075 CCR2P41597 374 aa12.39□□□□□ -0.43
LRTM1-202ENST00000493075 WNT7BP56706 349 aa12.39□□□□□ -0.43
LRTM1-202ENST00000493075 RBP5P82980 135 aa12.39□□□□□ -0.43
LRTM1-202ENST00000493075 TFAMQ00059 246 aaKnown RBP12.39□□□□□ -0.43
LRTM1-202ENST00000493075 SLC44A4Q53GD3 710 aa12.39□□□□□ -0.43
LRTM1-202ENST00000493075 FAM26FQ5R3K3 315 aa12.39□□□□□ -0.43
LRTM1-202ENST00000493075 WSCD1Q658N2 575 aa12.39□□□□□ -0.43
LRTM1-202ENST00000493075 HS6ST3Q8IZP7 471 aa12.39□□□□□ -0.43
LRTM1-202ENST00000493075 C1orf127Q8N9H9 656 aa12.39□□□□□ -0.43
LRTM1-202ENST00000493075 ATAD1Q8NBU5 361 aa12.39□□□□□ -0.43
LRTM1-202ENST00000493075 ST13P5Q8NFI4 369 aaPredicted RBP12.39□□□□□ -0.43
LRTM1-202ENST00000493075 OR10T2Q8NGX3 314 aa12.39□□□□□ -0.43
LRTM1-202ENST00000493075 CXorf38Q8TB03 319 aa12.39□□□□□ -0.43
LRTM1-202ENST00000493075 SPATA18Q8TC71 538 aa12.39□□□□□ -0.43
LRTM1-202ENST00000493075 ATOH1Q92858 354 aaPredicted RBP12.39□□□□□ -0.43
LRTM1-202ENST00000493075 HPS3Q969F9 1004 aa12.39□□□□□ -0.43
LRTM1-202ENST00000493075 TCEAL4Q96EI5 215 aa12.39□□□□□ -0.43
LRTM1-202ENST00000493075 DDX23Q9BUQ8 820 aaKnown RBP12.39□□□□□ -0.43
LRTM1-202ENST00000493075 LRRC3Q9BY71 257 aa12.39□□□□□ -0.43
LRTM1-202ENST00000493075 CRISPLD1Q9H336 500 aa12.39□□□□□ -0.43
LRTM1-202ENST00000493075 PCIF1Q9H4Z3 704 aa12.39□□□□□ -0.43
LRTM1-202ENST00000493075 TBC1D17Q9HA65 648 aa12.39□□□□□ -0.43
LRTM1-202ENST00000493075 TRPV4Q9HBA0 871 aa12.39□□□□□ -0.43
LRTM1-202ENST00000493075 ZFP14Q9HCL3 533 aa12.39□□□□□ -0.43
LRTM1-202ENST00000493075 GDAP2Q9NXN4 497 aa12.39□□□□□ -0.43
LRTM1-202ENST00000493075 ITGA11Q9UKX5 1188 aa12.39□□□□□ -0.43
LRTM1-202ENST00000493075 AGAP1Q9UPQ3 857 aa12.39□□□□□ -0.43
LRTM1-202ENST00000493075 MYO10Q9HD67 2058 aa12.39□□□□□ -0.43
LRTM1-202ENST00000493075 UBE4BO95155 1302 aa12.39□□□□□ -0.43
LRTM1-202ENST00000493075 GOLGA8IPA6NC78 632 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms