RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 MICAL3Q7RTP6 2002 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 A0A087X0T9 212 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 GOLGA6L9A6NEM1 432 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 ENPP3O14638 875 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 ZNF263O14978 683 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 WEE2P0C1S8 567 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 FAM228BP0C875 321 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 CYP11B1P15538 503 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 CD58P19256 250 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 CYP27A1Q02318 531 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 GRIK3Q13003 919 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 NAB2Q15742 525 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 GLB1LQ6UWU2 654 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 SYT11Q9BT88 431 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 ZMYND15Q9H091 742 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 ELAC1Q9H777 363 aaKnown RBP15.06■□□□□ 0
PDZRN3-210ENST00000492909 CYP3A43Q9HB55 503 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 TMEM161AQ9NX61 479 aa15.06■□□□□ 0
PDZRN3-210ENST00000492909 H0YGN5 161 aa15.05■□□□□ -0
PDZRN3-210ENST00000492909 INPPL1O15357 1258 aa15.05■□□□□ -0
PDZRN3-210ENST00000492909 TNFAIP3P21580 790 aa15.05■□□□□ -0
PDZRN3-210ENST00000492909 RFC2P35250 354 aa15.05■□□□□ -0
PDZRN3-210ENST00000492909 ELF2Q15723 593 aa15.05■□□□□ -0
PDZRN3-210ENST00000492909 DEFB128Q7Z7B8 93 aa15.05■□□□□ -0
PDZRN3-210ENST00000492909 KIAA1328Q86T90 577 aa15.05■□□□□ -0
PDZRN3-210ENST00000492909 NOP9Q86U38 636 aaKnown RBP15.05■□□□□ -0
PDZRN3-210ENST00000492909 RBBP8NLQ8NC74 664 aaPredicted RBP15.05■□□□□ -0
PDZRN3-210ENST00000492909 MMS19Q96T76 1030 aa15.05■□□□□ -0
PDZRN3-210ENST00000492909 AGPAT1Q99943 283 aa15.05■□□□□ -0
PDZRN3-210ENST00000492909 FAM124BQ9H5Z6 455 aaPredicted RBP15.05■□□□□ -0
PDZRN3-210ENST00000492909 SMYD3Q9H7B4 428 aa15.05■□□□□ -0
PDZRN3-210ENST00000492909 ACP6Q9NPH0 428 aa15.05■□□□□ -0
PDZRN3-210ENST00000492909 LUC7LQ9NQ29 371 aaKnown RBP15.05■□□□□ -0
PDZRN3-210ENST00000492909 DNAI1Q9UI46 699 aa15.05■□□□□ -0
PDZRN3-210ENST00000492909 NOCTQ9UK39 431 aaKnown RBP15.05■□□□□ -0
PDZRN3-210ENST00000492909 INPP5FQ9Y2H2 1132 aa15.05■□□□□ -0
PDZRN3-210ENST00000492909 SPDYE4A6NLX3 237 aa15.04■□□□□ -0
PDZRN3-210ENST00000492909 POMCP01189 267 aa15.04■□□□□ -0
PDZRN3-210ENST00000492909 TAF6P49848 677 aa15.04■□□□□ -0
PDZRN3-210ENST00000492909 SV2CQ496J9 727 aa15.04■□□□□ -0
PDZRN3-210ENST00000492909 GLYCTKQ8IVS8 523 aa15.04■□□□□ -0
PDZRN3-210ENST00000492909 TTC39CQ8N584 583 aa15.04■□□□□ -0
PDZRN3-210ENST00000492909 SLC20A1Q8WUM9 679 aa15.04■□□□□ -0
PDZRN3-210ENST00000492909 PRKAG2Q9UGJ0 569 aa15.04■□□□□ -0
PDZRN3-210ENST00000492909 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.04■□□□□ -0
PDZRN3-210ENST00000492909 SNX9Q9Y5X1 595 aa15.04■□□□□ -0
PDZRN3-210ENST00000492909 V9GYY5 206 aaPredicted RBP15.04■□□□□ -0
PDZRN3-210ENST00000492909 KPNA7A9QM74 516 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 DDX3XO00571 662 aaKnown RBP eCLIP15.03■□□□□ -0
PDZRN3-210ENST00000492909 KIAA0355O15063 1070 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 TIMP1P01033 207 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 RPL9P32969 192 aaKnown RBP15.03■□□□□ -0
PDZRN3-210ENST00000492909 RAP1GAPP47736 663 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 VAV2P52735 878 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 ZNF132P52740 706 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 CDH8P55286 799 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 CDR2Q01850 454 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 TCTN1Q2MV58 587 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 C10orf76Q5T2E6 689 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 RPUSD2Q8IZ73 545 aaKnown RBP15.03■□□□□ -0
PDZRN3-210ENST00000492909 TXLNBQ8N3L3 684 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 SLC30A5Q8TAD4 765 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 URGCPQ8TCY9 931 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 SDCBP2Q9H190 292 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 SEPT11Q9NVA2 429 aaKnown RBP15.03■□□□□ -0
PDZRN3-210ENST00000492909 RNF216Q9NWF9 866 aaPredicted RBP15.03■□□□□ -0
PDZRN3-210ENST00000492909 GDAP2Q9NXN4 497 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 NAGPAQ9UK23 515 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 PCDHB7Q9Y5E2 793 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 PCDHA13Q9Y5I0 950 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 NR2E3Q9Y5X4 410 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 RAG1P15918 1043 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 MAGEA1P43355 309 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 LILRA4P59901 499 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 TUSC3Q13454 348 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 IKBKEQ14164 716 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 ARHGAP29Q52LW3 1261 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 CLLU1OSQ5K130 101 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 CCDC122Q5T0U0 273 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 TAF3Q5VWG9 929 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 ALKBH5Q6P6C2 394 aaKnown RBP15.03■□□□□ -0
PDZRN3-210ENST00000492909 CNKSR3Q6P9H4 555 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 ZNF677Q86XU0 584 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 OLIG1Q8TAK6 271 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 LNX1Q8TBB1 728 aaPredicted RBP15.03■□□□□ -0
PDZRN3-210ENST00000492909 DDX1Q92499 740 aaKnown RBP15.03■□□□□ -0
PDZRN3-210ENST00000492909 BADQ92934 168 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 LZTFL1Q9NQ48 299 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 KANSL3Q9P2N6 904 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 LRFN2Q9ULH4 789 aa15.03■□□□□ -0
PDZRN3-210ENST00000492909 CASTOR2A6NHX0 329 aa15.02□□□□□ -0.01
PDZRN3-210ENST00000492909 PODXLO00592 558 aa15.02□□□□□ -0.01
PDZRN3-210ENST00000492909 CILPO75339 1184 aa15.02□□□□□ -0.01
PDZRN3-210ENST00000492909 MMEP08473 750 aa15.02□□□□□ -0.01
PDZRN3-210ENST00000492909 FGFR1P11362 822 aa15.02□□□□□ -0.01
PDZRN3-210ENST00000492909 CHRNB2P17787 502 aa15.02□□□□□ -0.01
PDZRN3-210ENST00000492909 GNA15P30679 374 aa15.02□□□□□ -0.01
PDZRN3-210ENST00000492909 CLCNKBP51801 687 aa15.02□□□□□ -0.01
PDZRN3-210ENST00000492909 INCA1Q0VD86 236 aa15.02□□□□□ -0.01
PDZRN3-210ENST00000492909 ZNF394Q53GI3 561 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms