RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 MYL4P12829 197 aa13.48□□□□□ -0.25
COL6A1-205ENST00000492851 PNPLA4P41247 253 aa13.48□□□□□ -0.25
COL6A1-205ENST00000492851 TAF6P49848 677 aa13.48□□□□□ -0.25
COL6A1-205ENST00000492851 RESTQ13127 1097 aa13.48□□□□□ -0.25
COL6A1-205ENST00000492851 UBXN2BQ14CS0 331 aa13.48□□□□□ -0.25
COL6A1-205ENST00000492851 CENPPQ6IPU0 288 aa13.48□□□□□ -0.25
COL6A1-205ENST00000492851 SLC39A4Q6P5W5 647 aa13.48□□□□□ -0.25
COL6A1-205ENST00000492851 STXBP4Q6ZWJ1 553 aa13.48□□□□□ -0.25
COL6A1-205ENST00000492851 KCNG4Q8TDN1 519 aa13.48□□□□□ -0.25
COL6A1-205ENST00000492851 CACTINQ8WUQ7 758 aaKnown RBP13.48□□□□□ -0.25
COL6A1-205ENST00000492851 FOXQ1Q9C009 403 aa13.48□□□□□ -0.25
COL6A1-205ENST00000492851 TMEM206Q9H813 350 aa13.48□□□□□ -0.25
COL6A1-205ENST00000492851 LTB4R2Q9NPC1 389 aa13.48□□□□□ -0.25
COL6A1-205ENST00000492851 DPP3Q9NY33 737 aa13.48□□□□□ -0.25
COL6A1-205ENST00000492851 ZMYM5Q9UJ78 669 aa13.48□□□□□ -0.25
COL6A1-205ENST00000492851 YIPF1Q9Y548 306 aa13.48□□□□□ -0.25
COL6A1-205ENST00000492851 CYB561D2O14569 222 aa13.47□□□□□ -0.25
COL6A1-205ENST00000492851 KIAA0391O15091 583 aaKnown RBP13.47□□□□□ -0.25
COL6A1-205ENST00000492851 PPP1R37O75864 691 aa13.47□□□□□ -0.25
COL6A1-205ENST00000492851 NFICP08651 508 aa13.47□□□□□ -0.25
COL6A1-205ENST00000492851 SP9P0CG40 484 aa13.47□□□□□ -0.25
COL6A1-205ENST00000492851 GARTP22102 1010 aa13.47□□□□□ -0.25
COL6A1-205ENST00000492851 STAT6P42226 847 aa13.47□□□□□ -0.25
COL6A1-205ENST00000492851 RPS9P46781 194 aaKnown RBP13.47□□□□□ -0.25
COL6A1-205ENST00000492851 AMPD3Q01432 767 aa13.47□□□□□ -0.25
COL6A1-205ENST00000492851 VEPH1Q14D04 833 aa13.47□□□□□ -0.25
COL6A1-205ENST00000492851 SV2CQ496J9 727 aa13.47□□□□□ -0.25
COL6A1-205ENST00000492851 L1TD1Q5T7N2 865 aaKnown RBP13.47□□□□□ -0.25
COL6A1-205ENST00000492851 TPRG1Q6ZUI0 275 aa13.47□□□□□ -0.25
COL6A1-205ENST00000492851 USP49Q70CQ1 688 aa13.47□□□□□ -0.25
COL6A1-205ENST00000492851 SFR1Q86XK3 245 aa13.47□□□□□ -0.25
COL6A1-205ENST00000492851 MFSD6LQ8IWD5 586 aa13.47□□□□□ -0.25
COL6A1-205ENST00000492851 SYCP3Q8IZU3 236 aa13.47□□□□□ -0.25
COL6A1-205ENST00000492851 ADSSL1Q8N142 457 aa13.47□□□□□ -0.25
COL6A1-205ENST00000492851 ZSCAN18Q8TBC5 510 aaPredicted RBP13.47□□□□□ -0.25
COL6A1-205ENST00000492851 CLDN23Q96B33 292 aa13.47□□□□□ -0.25
COL6A1-205ENST00000492851 TCEAL4Q96EI5 215 aa13.47□□□□□ -0.25
COL6A1-205ENST00000492851 MSANTD3Q96H12 275 aa13.47□□□□□ -0.25
COL6A1-205ENST00000492851 ZNF560Q96MR9 790 aa13.47□□□□□ -0.25
COL6A1-205ENST00000492851 PGLYRP2Q96PD5 576 aa13.47□□□□□ -0.25
COL6A1-205ENST00000492851 IER2Q9BTL4 223 aa13.47□□□□□ -0.25
COL6A1-205ENST00000492851 STRA6Q9BX79 667 aa13.47□□□□□ -0.25
COL6A1-205ENST00000492851 PLA2G2FQ9BZM2 168 aa13.47□□□□□ -0.25
COL6A1-205ENST00000492851 SPATA6Q9NWH7 488 aaPredicted RBP13.47□□□□□ -0.25
COL6A1-205ENST00000492851 ZFHX2Q9C0A1 2572 aaPredicted RBP13.46□□□□□ -0.25
COL6A1-205ENST00000492851 MYMKA6NI61 221 aa13.46□□□□□ -0.25
COL6A1-205ENST00000492851 KPNA7A9QM74 516 aa13.46□□□□□ -0.25
COL6A1-205ENST00000492851 K7ELQ4 463 aaPredicted RBP13.46□□□□□ -0.25
COL6A1-205ENST00000492851 ZNF263O14978 683 aa13.46□□□□□ -0.25
COL6A1-205ENST00000492851 STX6O43752 255 aa13.46□□□□□ -0.25
COL6A1-205ENST00000492851 GCNT3O95395 438 aa13.46□□□□□ -0.25
COL6A1-205ENST00000492851 IDEP14735 1019 aa13.46□□□□□ -0.25
COL6A1-205ENST00000492851 FCARP24071 287 aa13.46□□□□□ -0.25
COL6A1-205ENST00000492851 CCR2P41597 374 aa13.46□□□□□ -0.25
COL6A1-205ENST00000492851 CEBPZQ03701 1054 aaKnown RBP13.46□□□□□ -0.25
COL6A1-205ENST00000492851 PPP2R5DQ14738 602 aa13.46□□□□□ -0.25
COL6A1-205ENST00000492851 ARHGAP15Q53QZ3 475 aa13.46□□□□□ -0.25
COL6A1-205ENST00000492851 DNAJB7Q7Z6W7 309 aaPredicted RBP13.46□□□□□ -0.25
COL6A1-205ENST00000492851 CCDC65Q8IXS2 484 aa13.46□□□□□ -0.25
COL6A1-205ENST00000492851 YAF2Q8IY57 180 aa13.46□□□□□ -0.25
COL6A1-205ENST00000492851 DCP1BQ8IZD4 617 aaKnown RBP13.46□□□□□ -0.25
COL6A1-205ENST00000492851 HS6ST3Q8IZP7 471 aa13.46□□□□□ -0.25
COL6A1-205ENST00000492851 SPPL2BQ8TCT7 592 aa13.46□□□□□ -0.25
COL6A1-205ENST00000492851 PSMG2Q969U7 264 aa13.46□□□□□ -0.25
COL6A1-205ENST00000492851 DNAJC19Q96DA6 116 aa13.46□□□□□ -0.25
COL6A1-205ENST00000492851 ZNF396Q96N95 335 aaPredicted RBP13.46□□□□□ -0.25
COL6A1-205ENST00000492851 CLIC6Q96NY7 704 aa13.46□□□□□ -0.25
COL6A1-205ENST00000492851 BACH2Q9BYV9 841 aa13.46□□□□□ -0.25
COL6A1-205ENST00000492851 ZCWPW1Q9H0M4 648 aa13.46□□□□□ -0.25
COL6A1-205ENST00000492851 CUEDC2Q9H467 287 aa13.46□□□□□ -0.25
COL6A1-205ENST00000492851 SLITRK6Q9H5Y7 841 aa13.46□□□□□ -0.25
COL6A1-205ENST00000492851 ZNF334Q9HCZ1 680 aaPredicted RBP13.46□□□□□ -0.25
COL6A1-205ENST00000492851 MTMR6Q9Y217 621 aa13.46□□□□□ -0.25
COL6A1-205ENST00000492851 SLC27A5Q9Y2P5 690 aa13.46□□□□□ -0.25
COL6A1-205ENST00000492851 R3HCC1Q9Y3T6 440 aaKnown RBP13.46□□□□□ -0.25
COL6A1-205ENST00000492851 CITO14578 2027 aa13.46□□□□□ -0.26
COL6A1-205ENST00000492851 USP34Q70CQ2 3546 aa13.45□□□□□ -0.26
COL6A1-205ENST00000492851 DOCK8Q8NF50 2099 aa13.45□□□□□ -0.26
COL6A1-205ENST00000492851 FRMD3A2A2Y4 597 aa13.45□□□□□ -0.26
COL6A1-205ENST00000492851 MTMR11A4FU01 709 aa13.45□□□□□ -0.26
COL6A1-205ENST00000492851 SPTLC1O15269 473 aa13.45□□□□□ -0.26
COL6A1-205ENST00000492851 PPP6R2O75170 966 aa13.45□□□□□ -0.26
COL6A1-205ENST00000492851 MOSPD3O75425 235 aa13.45□□□□□ -0.26
COL6A1-205ENST00000492851 OR4Q2P0C623 313 aa13.45□□□□□ -0.26
COL6A1-205ENST00000492851 WEE1P30291 646 aa13.45□□□□□ -0.26
COL6A1-205ENST00000492851 ADSSP30520 456 aa13.45□□□□□ -0.26
COL6A1-205ENST00000492851 GDI1P31150 447 aa13.45□□□□□ -0.26
COL6A1-205ENST00000492851 NASPP49321 788 aaPredicted RBP13.45□□□□□ -0.26
COL6A1-205ENST00000492851 GUCY2FP51841 1108 aa13.45□□□□□ -0.26
COL6A1-205ENST00000492851 FOXK2Q01167 660 aa13.45□□□□□ -0.26
COL6A1-205ENST00000492851 STK38Q15208 465 aa13.45□□□□□ -0.26
COL6A1-205ENST00000492851 TEAD2Q15562 447 aa13.45□□□□□ -0.26
COL6A1-205ENST00000492851 TAF12Q16514 161 aa13.45□□□□□ -0.26
COL6A1-205ENST00000492851 CRELD2Q6UXH1 353 aaPredicted RBP13.45□□□□□ -0.26
COL6A1-205ENST00000492851 MAMSTRQ6ZN01 415 aa13.45□□□□□ -0.26
COL6A1-205ENST00000492851 ATAD1Q8NBU5 361 aa13.45□□□□□ -0.26
COL6A1-205ENST00000492851 SHKBP1Q8TBC3 707 aa13.45□□□□□ -0.26
COL6A1-205ENST00000492851 FAM200AQ8TCP9 573 aa13.45□□□□□ -0.26
COL6A1-205ENST00000492851 CSGALNACT1Q8TDX6 532 aa13.45□□□□□ -0.26
COL6A1-205ENST00000492851 ZSWIM3Q96MP5 696 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms