RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 PPP2R5DQ14738 602 aa9.48□□□□□ -0.89
NUP50-217ENST00000491860 VEPH1Q14D04 833 aa9.48□□□□□ -0.89
NUP50-217ENST00000491860 SLC5A9Q2M3M2 681 aa9.48□□□□□ -0.89
NUP50-217ENST00000491860 JADE1Q6IE81 842 aa9.48□□□□□ -0.89
NUP50-217ENST00000491860 ZNF720Q7Z2F6 126 aa9.48□□□□□ -0.89
NUP50-217ENST00000491860 CACTINQ8WUQ7 758 aaKnown RBP9.48□□□□□ -0.89
NUP50-217ENST00000491860 ING5Q8WYH8 240 aa9.48□□□□□ -0.89
NUP50-217ENST00000491860 POMGNT1Q8WZA1 660 aa9.48□□□□□ -0.89
NUP50-217ENST00000491860 FAM212AQ96EL1 285 aa9.48□□□□□ -0.89
NUP50-217ENST00000491860 MCRS1Q96EZ8 462 aa9.48□□□□□ -0.89
NUP50-217ENST00000491860 ASB16Q96NS5 453 aa9.48□□□□□ -0.89
NUP50-217ENST00000491860 ACCSQ96QU6 501 aa9.48□□□□□ -0.89
NUP50-217ENST00000491860 TRMT61BQ9BVS5 477 aaKnown RBP9.48□□□□□ -0.89
NUP50-217ENST00000491860 FAM126AQ9BYI3 521 aaPredicted RBP9.48□□□□□ -0.89
NUP50-217ENST00000491860 HAPLN2Q9GZV7 340 aa9.48□□□□□ -0.89
NUP50-217ENST00000491860 BRD9Q9H8M2 597 aa9.48□□□□□ -0.89
NUP50-217ENST00000491860 MRPL44Q9H9J2 332 aaKnown RBP9.48□□□□□ -0.89
NUP50-217ENST00000491860 TRPV4Q9HBA0 871 aa9.48□□□□□ -0.89
NUP50-217ENST00000491860 OLFML3Q9NRN5 406 aa9.48□□□□□ -0.89
NUP50-217ENST00000491860 DLGAP2Q9P1A6 1054 aa9.48□□□□□ -0.89
NUP50-217ENST00000491860 ANK1P16157 1881 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 TCHHQ07283 1943 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 OTOGLQ3ZCN5 2332 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 ANO9A1A5B4 782 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 FAM170BA6NMN3 283 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 PIRO00625 290 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 SPTLC1O15269 473 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 LAMTOR5O43504 91 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 DCNP07585 359 aaKnown RBP9.47□□□□□ -0.89
NUP50-217ENST00000491860 CEBPBP17676 345 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 SYT1P21579 422 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 GARTP22102 1010 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 NMT1P30419 496 aaKnown RBP9.47□□□□□ -0.89
NUP50-217ENST00000491860 TAF6P49848 677 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 UBXN2BQ14CS0 331 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 PTPAQ15257 358 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 SV2CQ496J9 727 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 ARHGAP15Q53QZ3 475 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 SPECC1Q5M775 1068 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 L1TD1Q5T7N2 865 aaKnown RBP9.47□□□□□ -0.89
NUP50-217ENST00000491860 C9orf57Q5W0N0 161 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 RNF19BQ6ZMZ0 732 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 MFSD6LQ8IWD5 586 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 YAF2Q8IY57 180 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 KIAA2013Q8IYS2 634 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 SPATA18Q8TC71 538 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 SPPL2BQ8TCT7 592 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 KCNG4Q8TDN1 519 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 RUBCNQ92622 972 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 CLDN23Q96B33 292 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 SENP8Q96LD8 212 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 GCNAQ96QF7 691 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 FIZ1Q96SL8 496 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 RPP25Q9BUL9 199 aaKnown RBP9.47□□□□□ -0.89
NUP50-217ENST00000491860 CUEDC2Q9H467 287 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 SLITRK6Q9H5Y7 841 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 TMEM206Q9H813 350 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 LTB4R2Q9NPC1 389 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 FBXO2Q9UK22 296 aaPredicted RBP9.47□□□□□ -0.89
NUP50-217ENST00000491860 R3HCC1Q9Y3T6 440 aaKnown RBP9.47□□□□□ -0.89
NUP50-217ENST00000491860 YIPF1Q9Y548 306 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 CLIC4Q9Y696 253 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 CACNA1IQ9P0X4 2223 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 CACNA1BQ00975 2339 aa9.47□□□□□ -0.89
NUP50-217ENST00000491860 F5P12259 2224 aa9.46□□□□□ -0.89
NUP50-217ENST00000491860 SOBPA7XYQ1 873 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 ZNF263O14978 683 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 KINO60870 393 aaKnown RBP9.46□□□□□ -0.9
NUP50-217ENST00000491860 SP9P0CG40 484 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 MYL4P12829 197 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 WEE1P30291 646 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 CDC25CP30307 473 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 STAT6P42226 847 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 AMPD3Q01432 767 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 GRIN1Q05586 938 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 SPAG1Q07617 926 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 RESTQ13127 1097 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 SLC39A14Q15043 492 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 SURF1Q15526 300 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 TAF12Q16514 161 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 FAM78AQ5JUQ0 283 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 TANGO2Q6ICL3 276 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 CENPPQ6IPU0 288 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 MAMSTRQ6ZN01 415 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 TPRG1Q6ZUI0 275 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 DYMQ7RTS9 669 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 SFR1Q86XK3 245 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 CCDC65Q8IXS2 484 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 DCP1BQ8IZD4 617 aaKnown RBP9.46□□□□□ -0.9
NUP50-217ENST00000491860 SYCP3Q8IZU3 236 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 TMEM86AQ8N2M4 240 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 CSGALNACT1Q8TDX6 532 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 SECISBP2LQ93073 1101 aaKnown RBP9.46□□□□□ -0.9
NUP50-217ENST00000491860 PSMG2Q969U7 264 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 EPSTI1Q96J88 318 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 FOXQ1Q9C009 403 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 C8orf33Q9H7E9 229 aaPredicted RBP9.46□□□□□ -0.9
NUP50-217ENST00000491860 SPATA6Q9NWH7 488 aaPredicted RBP9.46□□□□□ -0.9
NUP50-217ENST00000491860 DPP3Q9NY33 737 aa9.46□□□□□ -0.9
NUP50-217ENST00000491860 OBP2AQ9NY56 170 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms