RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 RNF19BQ6ZMZ0 732 aa17.89■□□□□ 0.45
PDLIM2-217ENST00000491330 TMEM105Q8N8V8 129 aa17.89■□□□□ 0.45
PDLIM2-217ENST00000491330 ANKRD36BP1Q96IX9 119 aa17.89■□□□□ 0.45
PDLIM2-217ENST00000491330 NELL2Q99435 816 aa17.89■□□□□ 0.45
PDLIM2-217ENST00000491330 SIT1Q9Y3P8 196 aa17.89■□□□□ 0.45
PDLIM2-217ENST00000491330 ZNF233A6NK53 670 aa17.88■□□□□ 0.45
PDLIM2-217ENST00000491330 KPNA7A9QM74 516 aa17.88■□□□□ 0.45
PDLIM2-217ENST00000491330 H0Y858 1186 aa17.88■□□□□ 0.45
PDLIM2-217ENST00000491330 MEFVO15553 781 aaPredicted RBP17.88■□□□□ 0.45
PDLIM2-217ENST00000491330 HUS1O60921 280 aa17.88■□□□□ 0.45
PDLIM2-217ENST00000491330 SEC24AO95486 1093 aa17.88■□□□□ 0.45
PDLIM2-217ENST00000491330 TNNC2P02585 160 aa17.88■□□□□ 0.45
PDLIM2-217ENST00000491330 GUCY2FP51841 1108 aa17.88■□□□□ 0.45
PDLIM2-217ENST00000491330 GPC5P78333 572 aa17.88■□□□□ 0.45
PDLIM2-217ENST00000491330 TSPY1Q01534 308 aa17.88■□□□□ 0.45
PDLIM2-217ENST00000491330 MYO1EQ12965 1108 aa17.88■□□□□ 0.45
PDLIM2-217ENST00000491330 HS2ST1Q7LGA3 356 aa17.88■□□□□ 0.45
PDLIM2-217ENST00000491330 YAF2Q8IY57 180 aa17.88■□□□□ 0.45
PDLIM2-217ENST00000491330 GPD1LQ8N335 351 aa17.88■□□□□ 0.45
PDLIM2-217ENST00000491330 FGF14Q92915 247 aa17.88■□□□□ 0.45
PDLIM2-217ENST00000491330 ELSPBP1Q96BH3 223 aa17.88■□□□□ 0.45
PDLIM2-217ENST00000491330 PGLYRP2Q96PD5 576 aa17.88■□□□□ 0.45
PDLIM2-217ENST00000491330 TBC1D17Q9HA65 648 aa17.88■□□□□ 0.45
PDLIM2-217ENST00000491330 ANO9A1A5B4 782 aa17.87■□□□□ 0.45
PDLIM2-217ENST00000491330 FRMD3A2A2Y4 597 aa17.87■□□□□ 0.45
PDLIM2-217ENST00000491330 DPYSL4O14531 572 aa17.87■□□□□ 0.45
PDLIM2-217ENST00000491330 PPP1R37O75864 691 aa17.87■□□□□ 0.45
PDLIM2-217ENST00000491330 CYP11A1P05108 521 aa17.87■□□□□ 0.45
PDLIM2-217ENST00000491330 KRT19P08727 400 aa17.87■□□□□ 0.45
PDLIM2-217ENST00000491330 SNRPFP62306 86 aaKnown RBP17.87■□□□□ 0.45
PDLIM2-217ENST00000491330 RBP5P82980 135 aa17.87■□□□□ 0.45
PDLIM2-217ENST00000491330 TCF15Q12870 199 aa17.87■□□□□ 0.45
PDLIM2-217ENST00000491330 DUSP4Q13115 394 aa17.87■□□□□ 0.45
PDLIM2-217ENST00000491330 FOXD4L6Q3SYB3 417 aaPredicted RBP17.87■□□□□ 0.45
PDLIM2-217ENST00000491330 FOXD4L3Q6VB84 417 aaPredicted RBP17.87■□□□□ 0.45
PDLIM2-217ENST00000491330 BRSK2Q8IWQ3 736 aa17.87■□□□□ 0.45
PDLIM2-217ENST00000491330 DTWD2Q8NBA8 298 aa17.87■□□□□ 0.45
PDLIM2-217ENST00000491330 CCDC47Q96A33 483 aaKnown RBP17.87■□□□□ 0.45
PDLIM2-217ENST00000491330 SAAL1Q96ER3 474 aa17.87■□□□□ 0.45
PDLIM2-217ENST00000491330 CCDC34Q96HJ3 373 aa17.87■□□□□ 0.45
PDLIM2-217ENST00000491330 STRA6Q9BX79 667 aa17.87■□□□□ 0.45
PDLIM2-217ENST00000491330 BCO2Q9BYV7 579 aa17.87■□□□□ 0.45
PDLIM2-217ENST00000491330 KBTBD4Q9NVX7 518 aa17.87■□□□□ 0.45
PDLIM2-217ENST00000491330 ITGA11Q9UKX5 1188 aa17.87■□□□□ 0.45
PDLIM2-217ENST00000491330 YIPF1Q9Y548 306 aa17.87■□□□□ 0.45
PDLIM2-217ENST00000491330 TRIP11Q15643 1979 aa17.86■□□□□ 0.45
PDLIM2-217ENST00000491330 EIF3DO15371 548 aaKnown RBP eCLIP17.86■□□□□ 0.45
PDLIM2-217ENST00000491330 PRPF6O94906 941 aaKnown RBP17.86■□□□□ 0.45
PDLIM2-217ENST00000491330 ADSSP30520 456 aa17.86■□□□□ 0.45
PDLIM2-217ENST00000491330 MAGEA9P43362 315 aa17.86■□□□□ 0.45
PDLIM2-217ENST00000491330 MYL7Q01449 175 aa17.86■□□□□ 0.45
PDLIM2-217ENST00000491330 NFE2Q16621 373 aaPredicted RBP17.86■□□□□ 0.45
PDLIM2-217ENST00000491330 MGAT5BQ3V5L5 792 aa17.86■□□□□ 0.45
PDLIM2-217ENST00000491330 SLC44A4Q53GD3 710 aa17.86■□□□□ 0.45
PDLIM2-217ENST00000491330 CENPPQ6IPU0 288 aa17.86■□□□□ 0.45
PDLIM2-217ENST00000491330 CCDC105Q8IYK2 499 aa17.86■□□□□ 0.45
PDLIM2-217ENST00000491330 CSGALNACT2Q8N6G5 542 aa17.86■□□□□ 0.45
PDLIM2-217ENST00000491330 LRRC52Q8N7C0 313 aa17.86■□□□□ 0.45
PDLIM2-217ENST00000491330 SPPL2BQ8TCT7 592 aa17.86■□□□□ 0.45
PDLIM2-217ENST00000491330 IRF7Q92985 503 aa17.86■□□□□ 0.45
PDLIM2-217ENST00000491330 SEPT5Q99719 369 aaPredicted RBP17.86■□□□□ 0.45
PDLIM2-217ENST00000491330 KXD1Q9BQD3 176 aa17.86■□□□□ 0.45
PDLIM2-217ENST00000491330 TRMT61BQ9BVS5 477 aaKnown RBP17.86■□□□□ 0.45
PDLIM2-217ENST00000491330 TRIM9Q9C026 710 aa17.86■□□□□ 0.45
PDLIM2-217ENST00000491330 BRD9Q9H8M2 597 aa17.86■□□□□ 0.45
PDLIM2-217ENST00000491330 CGNQ9P2M7 1197 aaKnown RBP17.86■□□□□ 0.45
PDLIM2-217ENST00000491330 ZMYM5Q9UJ78 669 aa17.86■□□□□ 0.45
PDLIM2-217ENST00000491330 AGAP1Q9UPQ3 857 aa17.86■□□□□ 0.45
PDLIM2-217ENST00000491330 PLXNA3P51805 1871 aa17.86■□□□□ 0.45
PDLIM2-217ENST00000491330 TISP43B9A030 160 aa17.85■□□□□ 0.45
PDLIM2-217ENST00000491330 MAN2B1O00754 1011 aa17.85■□□□□ 0.45
PDLIM2-217ENST00000491330 POLR2DO15514 142 aaKnown RBP17.85■□□□□ 0.45
PDLIM2-217ENST00000491330 PRPF40AO75400 957 aaKnown RBP17.85■□□□□ 0.45
PDLIM2-217ENST00000491330 MLF2Q15773 248 aaPredicted RBP17.85■□□□□ 0.45
PDLIM2-217ENST00000491330 DUOXA2Q1HG44 320 aa17.85■□□□□ 0.45
PDLIM2-217ENST00000491330 SLC39A12Q504Y0 691 aa17.85■□□□□ 0.45
PDLIM2-217ENST00000491330 FAM26FQ5R3K3 315 aa17.85■□□□□ 0.45
PDLIM2-217ENST00000491330 ZNF852Q6ZMS4 543 aa17.85■□□□□ 0.45
PDLIM2-217ENST00000491330 TMEM86AQ8N2M4 240 aa17.85■□□□□ 0.45
PDLIM2-217ENST00000491330 SPRYD3Q8NCJ5 442 aa17.85■□□□□ 0.45
PDLIM2-217ENST00000491330 DEPDC1BQ8WUY9 529 aa17.85■□□□□ 0.45
PDLIM2-217ENST00000491330 SMARCD2Q92925 531 aa17.85■□□□□ 0.45
PDLIM2-217ENST00000491330 FNBP1Q96RU3 617 aa17.85■□□□□ 0.45
PDLIM2-217ENST00000491330 C7orf25Q9BPX7 421 aa17.85■□□□□ 0.45
PDLIM2-217ENST00000491330 PCIF1Q9H4Z3 704 aa17.85■□□□□ 0.45
PDLIM2-217ENST00000491330 MUC6Q6W4X9 2439 aa17.84■□□□□ 0.45
PDLIM2-217ENST00000491330 UBE4BO95155 1302 aa17.84■□□□□ 0.45
PDLIM2-217ENST00000491330 PVALEFA0A1B0GWK0 134 aa17.84■□□□□ 0.45
PDLIM2-217ENST00000491330 KANSL1LA0AUZ9 987 aa17.84■□□□□ 0.45
PDLIM2-217ENST00000491330 MTMR11A4FU01 709 aa17.84■□□□□ 0.45
PDLIM2-217ENST00000491330 KRBA1A5PL33 1030 aa17.84■□□□□ 0.45
PDLIM2-217ENST00000491330 OR4Q2P0C623 313 aa17.84■□□□□ 0.45
PDLIM2-217ENST00000491330 NPR3P17342 541 aa17.84■□□□□ 0.45
PDLIM2-217ENST00000491330 CEBPBP17676 345 aa17.84■□□□□ 0.45
PDLIM2-217ENST00000491330 CDC25CP30307 473 aa17.84■□□□□ 0.45
PDLIM2-217ENST00000491330 POLR2BP30876 1174 aaKnown RBP17.84■□□□□ 0.45
PDLIM2-217ENST00000491330 LHX1P48742 406 aa17.84■□□□□ 0.45
PDLIM2-217ENST00000491330 STARD6P59095 220 aa17.84■□□□□ 0.45
PDLIM2-217ENST00000491330 KRT85P78386 507 aa17.84■□□□□ 0.45
PDLIM2-217ENST00000491330 BFSP1Q12934 665 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms