RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 PDCP20941 246 aa17.03■□□□□ 0.32
SMPD4-220ENST00000491319 ABCD1P33897 745 aa17.03■□□□□ 0.32
SMPD4-220ENST00000491319 DUSP4Q13115 394 aa17.03■□□□□ 0.32
SMPD4-220ENST00000491319 GPR17Q13304 367 aa17.03■□□□□ 0.32
SMPD4-220ENST00000491319 TEAD2Q15562 447 aa17.03■□□□□ 0.32
SMPD4-220ENST00000491319 ADALQ6DHV7 355 aa17.03■□□□□ 0.32
SMPD4-220ENST00000491319 VITQ6UXI7 678 aa17.03■□□□□ 0.32
SMPD4-220ENST00000491319 TMC8Q8IU68 726 aa17.03■□□□□ 0.32
SMPD4-220ENST00000491319 LEMD2Q8NC56 503 aa17.03■□□□□ 0.32
SMPD4-220ENST00000491319 SHKBP1Q8TBC3 707 aa17.03■□□□□ 0.32
SMPD4-220ENST00000491319 KCNG4Q8TDN1 519 aa17.03■□□□□ 0.32
SMPD4-220ENST00000491319 DNASE1L2Q92874 299 aa17.03■□□□□ 0.32
SMPD4-220ENST00000491319 SMARCD2Q92925 531 aa17.03■□□□□ 0.32
SMPD4-220ENST00000491319 OSBPL6Q9BZF3 934 aa17.03■□□□□ 0.32
SMPD4-220ENST00000491319 ST6GALNAC4Q9H4F1 302 aa17.03■□□□□ 0.32
SMPD4-220ENST00000491319 BRD9Q9H8M2 597 aa17.03■□□□□ 0.32
SMPD4-220ENST00000491319 SPATA6Q9NWH7 488 aaPredicted RBP17.03■□□□□ 0.32
SMPD4-220ENST00000491319 AGO2Q9UKV8 859 aaKnown RBP17.03■□□□□ 0.32
SMPD4-220ENST00000491319 STYXL1Q9Y6J8 313 aa17.03■□□□□ 0.32
SMPD4-220ENST00000491319 ANO9A1A5B4 782 aa17.02■□□□□ 0.32
SMPD4-220ENST00000491319 PIRO00625 290 aa17.02■□□□□ 0.32
SMPD4-220ENST00000491319 PPP1R37O75864 691 aa17.02■□□□□ 0.32
SMPD4-220ENST00000491319 LMNAP02545 664 aaKnown RBP17.02■□□□□ 0.32
SMPD4-220ENST00000491319 SYT1P21579 422 aa17.02■□□□□ 0.32
SMPD4-220ENST00000491319 VIPR2P41587 438 aa17.02■□□□□ 0.32
SMPD4-220ENST00000491319 CEBPZQ03701 1054 aaKnown RBP17.02■□□□□ 0.32
SMPD4-220ENST00000491319 PLD1Q13393 1074 aa17.02■□□□□ 0.32
SMPD4-220ENST00000491319 MYBPC2Q14324 1141 aa17.02■□□□□ 0.32
SMPD4-220ENST00000491319 CENPPQ6IPU0 288 aa17.02■□□□□ 0.32
SMPD4-220ENST00000491319 ZC3H14Q6PJT7 736 aaKnown RBP17.02■□□□□ 0.32
SMPD4-220ENST00000491319 ZNF720Q7Z2F6 126 aa17.02■□□□□ 0.32
SMPD4-220ENST00000491319 ATAD1Q8NBU5 361 aa17.02■□□□□ 0.32
SMPD4-220ENST00000491319 OR10T2Q8NGX3 314 aa17.02■□□□□ 0.32
SMPD4-220ENST00000491319 ZSCAN18Q8TBC5 510 aaPredicted RBP17.02■□□□□ 0.32
SMPD4-220ENST00000491319 TRMT61BQ9BVS5 477 aaKnown RBP17.02■□□□□ 0.32
SMPD4-220ENST00000491319 LRRC3Q9BY71 257 aa17.02■□□□□ 0.32
SMPD4-220ENST00000491319 SLITRK6Q9H5Y7 841 aa17.02■□□□□ 0.32
SMPD4-220ENST00000491319 CCDC39Q9UFE4 941 aa17.02■□□□□ 0.32
SMPD4-220ENST00000491319 SLC27A5Q9Y2P5 690 aa17.02■□□□□ 0.32
SMPD4-220ENST00000491319 DERAQ9Y315 318 aa17.02■□□□□ 0.32
SMPD4-220ENST00000491319 C2CD2Q9Y426 696 aa17.02■□□□□ 0.32
SMPD4-220ENST00000491319 SRPRBQ9Y5M8 271 aaKnown RBP17.02■□□□□ 0.32
SMPD4-220ENST00000491319 DCHS1Q96JQ0 3298 aa17.02■□□□□ 0.31
SMPD4-220ENST00000491319 A0A1W2PRU2 124 aa17.01■□□□□ 0.31
SMPD4-220ENST00000491319 MYMKA6NI61 221 aa17.01■□□□□ 0.31
SMPD4-220ENST00000491319 SOAT2O75908 522 aa17.01■□□□□ 0.31
SMPD4-220ENST00000491319 PSMC3P17980 439 aa17.01■□□□□ 0.31
SMPD4-220ENST00000491319 GDI1P31150 447 aa17.01■□□□□ 0.31
SMPD4-220ENST00000491319 CDR1P51861 262 aa17.01■□□□□ 0.31
SMPD4-220ENST00000491319 EPHB3P54753 998 aa17.01■□□□□ 0.31
SMPD4-220ENST00000491319 KCNA1Q09470 495 aa17.01■□□□□ 0.31
SMPD4-220ENST00000491319 STXBP5Q5T5C0 1151 aa17.01■□□□□ 0.31
SMPD4-220ENST00000491319 SLFN12LQ6IEE8 588 aa17.01■□□□□ 0.31
SMPD4-220ENST00000491319 CRELD2Q6UXH1 353 aaPredicted RBP17.01■□□□□ 0.31
SMPD4-220ENST00000491319 ZNF852Q6ZMS4 543 aa17.01■□□□□ 0.31
SMPD4-220ENST00000491319 EFCAB13Q8IY85 973 aa17.01■□□□□ 0.31
SMPD4-220ENST00000491319 POMGNT1Q8WZA1 660 aa17.01■□□□□ 0.31
SMPD4-220ENST00000491319 HVCN1Q96D96 273 aa17.01■□□□□ 0.31
SMPD4-220ENST00000491319 DNAJC19Q96DA6 116 aa17.01■□□□□ 0.31
SMPD4-220ENST00000491319 SEMA4AQ9H3S1 761 aa17.01■□□□□ 0.31
SMPD4-220ENST00000491319 ASB7Q9H672 318 aa17.01■□□□□ 0.31
SMPD4-220ENST00000491319 ZNF334Q9HCZ1 680 aaPredicted RBP17.01■□□□□ 0.31
SMPD4-220ENST00000491319 TBC1D7Q9P0N9 293 aa17.01■□□□□ 0.31
SMPD4-220ENST00000491319 ZNF292O60281 2723 aa17■□□□□ 0.31
SMPD4-220ENST00000491319 LAMTOR5O43504 91 aa17■□□□□ 0.31
SMPD4-220ENST00000491319 CYP11A1P05108 521 aa17■□□□□ 0.31
SMPD4-220ENST00000491319 ADSSP30520 456 aa17■□□□□ 0.31
SMPD4-220ENST00000491319 TXLNAP40222 546 aa17■□□□□ 0.31
SMPD4-220ENST00000491319 MAGEA9P43362 315 aa17■□□□□ 0.31
SMPD4-220ENST00000491319 ALDH1A3P47895 512 aa17■□□□□ 0.31
SMPD4-220ENST00000491319 RRAGBQ5VZM2 374 aa17■□□□□ 0.31
SMPD4-220ENST00000491319 ZSWIM2Q8NEG5 633 aa17■□□□□ 0.31
SMPD4-220ENST00000491319 IRF7Q92985 503 aa17■□□□□ 0.31
SMPD4-220ENST00000491319 CLDN23Q96B33 292 aa17■□□□□ 0.31
SMPD4-220ENST00000491319 RSPRY1Q96DX4 576 aa17■□□□□ 0.31
SMPD4-220ENST00000491319 STRA6Q9BX79 667 aa17■□□□□ 0.31
SMPD4-220ENST00000491319 MRPL44Q9H9J2 332 aaKnown RBP17■□□□□ 0.31
SMPD4-220ENST00000491319 TRPV4Q9HBA0 871 aa17■□□□□ 0.31
SMPD4-220ENST00000491319 FOXD4L1Q9NU39 408 aa17■□□□□ 0.31
SMPD4-220ENST00000491319 DPP3Q9NY33 737 aa17■□□□□ 0.31
SMPD4-220ENST00000491319 NDRG2Q9UN36 371 aaKnown RBP17■□□□□ 0.31
SMPD4-220ENST00000491319 A0A087X0B3 334 aa16.99■□□□□ 0.31
SMPD4-220ENST00000491319 HEPACAM2A8MVW5 462 aa16.99■□□□□ 0.31
SMPD4-220ENST00000491319 TAF6P49848 677 aa16.99■□□□□ 0.31
SMPD4-220ENST00000491319 CASP5P51878 434 aa16.99■□□□□ 0.31
SMPD4-220ENST00000491319 WNT7BP56706 349 aa16.99■□□□□ 0.31
SMPD4-220ENST00000491319 FZD5Q13467 585 aa16.99■□□□□ 0.31
SMPD4-220ENST00000491319 SLC39A12Q504Y0 691 aa16.99■□□□□ 0.31
SMPD4-220ENST00000491319 ARMCX5Q6P1M9 558 aa16.99■□□□□ 0.31
SMPD4-220ENST00000491319 SV2BQ7L1I2 683 aa16.99■□□□□ 0.31
SMPD4-220ENST00000491319 DEPDC1BQ8WUY9 529 aa16.99■□□□□ 0.31
SMPD4-220ENST00000491319 PSMG2Q969U7 264 aa16.99■□□□□ 0.31
SMPD4-220ENST00000491319 USP28Q96RU2 1077 aa16.99■□□□□ 0.31
SMPD4-220ENST00000491319 NELL2Q99435 816 aa16.99■□□□□ 0.31
SMPD4-220ENST00000491319 LPIN3Q9BQK8 851 aa16.99■□□□□ 0.31
SMPD4-220ENST00000491319 PYM1Q9BRP8 204 aaKnown RBP16.99■□□□□ 0.31
SMPD4-220ENST00000491319 FGFBP2Q9BYJ0 223 aa16.99■□□□□ 0.31
SMPD4-220ENST00000491319 SEL1LQ9UBV2 794 aa16.99■□□□□ 0.31
SMPD4-220ENST00000491319 FBXO4Q9UKT5 387 aa16.99■□□□□ 0.31
SMPD4-220ENST00000491319 MTMR6Q9Y217 621 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms