RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 ANKRD62A6NC57 917 aa14.85□□□□□ -0.03
SMPD4-219ENST00000491128 PIK3R2O00459 728 aa14.85□□□□□ -0.03
SMPD4-219ENST00000491128 RTN2O75298 545 aa14.85□□□□□ -0.03
SMPD4-219ENST00000491128 POMCP01189 267 aa14.85□□□□□ -0.03
SMPD4-219ENST00000491128 MRPS25P82663 173 aaKnown RBP14.85□□□□□ -0.03
SMPD4-219ENST00000491128 KYAT1Q16773 422 aa14.85□□□□□ -0.03
SMPD4-219ENST00000491128 C10orf76Q5T2E6 689 aa14.85□□□□□ -0.03
SMPD4-219ENST00000491128 C9orf57Q5W0N0 161 aa14.85□□□□□ -0.03
SMPD4-219ENST00000491128 GSTCDQ8NEC7 633 aa14.85□□□□□ -0.03
SMPD4-219ENST00000491128 TJP2Q9UDY2 1190 aa14.85□□□□□ -0.03
SMPD4-219ENST00000491128 JRKLQ9Y4A0 524 aa14.85□□□□□ -0.03
SMPD4-219ENST00000491128 GPR182O15218 404 aa14.85□□□□□ -0.03
SMPD4-219ENST00000491128 CABYRO75952 493 aa14.85□□□□□ -0.03
SMPD4-219ENST00000491128 TMEM253P0C7T8 217 aa14.85□□□□□ -0.03
SMPD4-219ENST00000491128 HSPA6P17066 643 aa14.85□□□□□ -0.03
SMPD4-219ENST00000491128 SCNN1GP51170 649 aa14.85□□□□□ -0.03
SMPD4-219ENST00000491128 ZNF132P52740 706 aa14.85□□□□□ -0.03
SMPD4-219ENST00000491128 NDST1P52848 882 aa14.85□□□□□ -0.03
SMPD4-219ENST00000491128 TNNC1P63316 161 aa14.85□□□□□ -0.03
SMPD4-219ENST00000491128 CCDC142Q17RM4 750 aa14.85□□□□□ -0.03
SMPD4-219ENST00000491128 AGMOQ6ZNB7 445 aa14.85□□□□□ -0.03
SMPD4-219ENST00000491128 APBB1IPQ7Z5R6 666 aaPredicted RBP14.85□□□□□ -0.03
SMPD4-219ENST00000491128 FMNL3Q8IVF7 1028 aa14.85□□□□□ -0.03
SMPD4-219ENST00000491128 C1orf131Q8NDD1 294 aaKnown RBP14.85□□□□□ -0.03
SMPD4-219ENST00000491128 BEST2Q8NFU1 509 aa14.85□□□□□ -0.03
SMPD4-219ENST00000491128 PLEKHA5Q9HAU0 1116 aa14.85□□□□□ -0.03
SMPD4-219ENST00000491128 ERVK-5Q9HDB9 667 aa14.85□□□□□ -0.03
SMPD4-219ENST00000491128 NME7Q9Y5B8 376 aa14.85□□□□□ -0.03
SMPD4-219ENST00000491128 PDE2AO00408 941 aaPredicted RBP14.84□□□□□ -0.03
SMPD4-219ENST00000491128 PDGFRBP09619 1106 aa14.84□□□□□ -0.03
SMPD4-219ENST00000491128 UNGP13051 313 aaPredicted RBP14.84□□□□□ -0.03
SMPD4-219ENST00000491128 ITGA4P13612 1032 aa14.84□□□□□ -0.03
SMPD4-219ENST00000491128 RRM1P23921 792 aa14.84□□□□□ -0.03
SMPD4-219ENST00000491128 RAD23BP54727 409 aa14.84□□□□□ -0.03
SMPD4-219ENST00000491128 PCBP1Q15365 356 aaKnown RBP eCLIP14.84□□□□□ -0.03
SMPD4-219ENST00000491128 ELF2Q15723 593 aa14.84□□□□□ -0.03
SMPD4-219ENST00000491128 ACAD10Q6JQN1 1059 aa14.84□□□□□ -0.03
SMPD4-219ENST00000491128 MMS22LQ6ZRQ5 1243 aa14.84□□□□□ -0.03
SMPD4-219ENST00000491128 RNF10Q8N5U6 811 aaKnown RBP14.84□□□□□ -0.03
SMPD4-219ENST00000491128 BCO2Q9BYV7 579 aa14.84□□□□□ -0.03
SMPD4-219ENST00000491128 PCDHGC5Q9Y5F6 944 aa14.84□□□□□ -0.03
SMPD4-219ENST00000491128 A0A0U1RQG5 324 aaPredicted RBP14.84□□□□□ -0.03
SMPD4-219ENST00000491128 CASTOR2A6NHX0 329 aa14.84□□□□□ -0.03
SMPD4-219ENST00000491128 ARVCFO00192 962 aa14.84□□□□□ -0.03
SMPD4-219ENST00000491128 ANXA13P27216 316 aa14.84□□□□□ -0.03
SMPD4-219ENST00000491128 GPC5P78333 572 aa14.84□□□□□ -0.03
SMPD4-219ENST00000491128 SLC4A11Q8NBS3 891 aa14.84□□□□□ -0.03
SMPD4-219ENST00000491128 HASPINQ8TF76 798 aa14.84□□□□□ -0.03
SMPD4-219ENST00000491128 RFFLQ8WZ73 363 aa14.84□□□□□ -0.03
SMPD4-219ENST00000491128 HEXIM2Q96MH2 286 aaKnown RBP14.84□□□□□ -0.03
SMPD4-219ENST00000491128 CNOT8Q9UFF9 292 aaKnown RBP14.84□□□□□ -0.03
SMPD4-219ENST00000491128 CNTN6Q9UQ52 1028 aa14.84□□□□□ -0.03
SMPD4-219ENST00000491128 ARL5CA6NH57 179 aa14.83□□□□□ -0.03
SMPD4-219ENST00000491128 TLR3O15455 904 aaKnown RBP14.83□□□□□ -0.03
SMPD4-219ENST00000491128 RBM10P98175 930 aaKnown RBP14.83□□□□□ -0.03
SMPD4-219ENST00000491128 MESDQ14696 234 aa14.83□□□□□ -0.03
SMPD4-219ENST00000491128 LLGL1Q15334 1064 aa14.83□□□□□ -0.03
SMPD4-219ENST00000491128 TEX35Q5T0J7 233 aa14.83□□□□□ -0.03
SMPD4-219ENST00000491128 PAPD7Q5XG87 772 aaKnown RBP14.83□□□□□ -0.03
SMPD4-219ENST00000491128 DENND1BQ6P3S1 775 aa14.83□□□□□ -0.03
SMPD4-219ENST00000491128 TRAF7Q6Q0C0 670 aa14.83□□□□□ -0.03
SMPD4-219ENST00000491128 RTN4RL1Q86UN2 441 aaPredicted RBP14.83□□□□□ -0.03
SMPD4-219ENST00000491128 LRRC57Q8N9N7 239 aa14.83□□□□□ -0.03
SMPD4-219ENST00000491128 UBA3Q8TBC4 463 aa14.83□□□□□ -0.03
SMPD4-219ENST00000491128 DIS3LQ8TF46 1054 aaKnown RBP14.83□□□□□ -0.03
SMPD4-219ENST00000491128 OSBPL9Q96SU4 736 aa14.83□□□□□ -0.03
SMPD4-219ENST00000491128 NUP85Q9BW27 656 aa14.83□□□□□ -0.03
SMPD4-219ENST00000491128 DPEP3Q9H4B8 488 aa14.83□□□□□ -0.03
SMPD4-219ENST00000491128 PAK6Q9NQU5 681 aaPredicted RBP14.83□□□□□ -0.03
SMPD4-219ENST00000491128 FAM49BQ9NUQ9 324 aa14.83□□□□□ -0.03
SMPD4-219ENST00000491128 TIMM13Q9Y5L4 95 aaPredicted RBP14.83□□□□□ -0.03
SMPD4-219ENST00000491128 SCN1AP35498 2009 aa14.83□□□□□ -0.03
SMPD4-219ENST00000491128 CITO14578 2027 aa14.83□□□□□ -0.04
SMPD4-219ENST00000491128 F8W810 466 aa14.83□□□□□ -0.04
SMPD4-219ENST00000491128 I3L4J1 428 aa14.83□□□□□ -0.04
SMPD4-219ENST00000491128 CILPO75339 1184 aa14.83□□□□□ -0.04
SMPD4-219ENST00000491128 ATF7P17544 494 aaPredicted RBP14.83□□□□□ -0.04
SMPD4-219ENST00000491128 LMO2P25791 158 aa14.83□□□□□ -0.04
SMPD4-219ENST00000491128 NSFP46459 744 aaKnown RBP14.83□□□□□ -0.04
SMPD4-219ENST00000491128 MYO1EQ12965 1108 aa14.83□□□□□ -0.04
SMPD4-219ENST00000491128 CYP4A22Q5TCH4 519 aa14.83□□□□□ -0.04
SMPD4-219ENST00000491128 ACOT1Q86TX2 421 aa14.83□□□□□ -0.04
SMPD4-219ENST00000491128 CD302Q8IX05 232 aa14.83□□□□□ -0.04
SMPD4-219ENST00000491128 TXLNBQ8N3L3 684 aa14.83□□□□□ -0.04
SMPD4-219ENST00000491128 WDTC1Q8N5D0 677 aa14.83□□□□□ -0.04
SMPD4-219ENST00000491128 SCLYQ96I15 445 aa14.83□□□□□ -0.04
SMPD4-219ENST00000491128 FAM81BQ96LP2 452 aa14.83□□□□□ -0.04
SMPD4-219ENST00000491128 TSEN34Q9BSV6 310 aaKnown RBP14.83□□□□□ -0.04
SMPD4-219ENST00000491128 CYTH4Q9UIA0 394 aa14.83□□□□□ -0.04
SMPD4-219ENST00000491128 UBQLN1Q9UMX0 589 aaKnown RBP14.83□□□□□ -0.04
SMPD4-219ENST00000491128 SNX12Q9UMY4 172 aa14.83□□□□□ -0.04
SMPD4-219ENST00000491128 GZMAP12544 262 aa14.82□□□□□ -0.04
SMPD4-219ENST00000491128 PRMT2P55345 433 aa14.82□□□□□ -0.04
SMPD4-219ENST00000491128 BPIFB4P59827 614 aa14.82□□□□□ -0.04
SMPD4-219ENST00000491128 NOMO3P69849 1222 aa14.82□□□□□ -0.04
SMPD4-219ENST00000491128 SOWAHAQ2M3V2 549 aa14.82□□□□□ -0.04
SMPD4-219ENST00000491128 MCOLN2Q8IZK6 566 aa14.82□□□□□ -0.04
SMPD4-219ENST00000491128 OR6B3Q8NGW1 331 aa14.82□□□□□ -0.04
SMPD4-219ENST00000491128 PLEKHA4Q9H4M7 779 aa14.82□□□□□ -0.04
SMPD4-219ENST00000491128 PHF24Q9UPV7 400 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms