RNA–Protein interactions for RNA: ENST00000490723.1

PHC3-212, Transcript of polyhomeotic homolog 3, human

TSL 2

Gene PHC3, Length 264 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHC3-212	ENST00000490723	MPL	P40238	635 aa		5.41	□□□□□ -1.54
PHC3-212	ENST00000490723	ZNF135	P52742	658 aa	Predicted RBP	5.41	□□□□□ -1.54
PHC3-212	ENST00000490723	RPS7	P62081	194 aa	Known RBP	5.41	□□□□□ -1.54
PHC3-212	ENST00000490723	PURA	Q00577	322 aa	Known RBP	5.41	□□□□□ -1.54
PHC3-212	ENST00000490723	MC2R	Q01718	297 aa		5.41	□□□□□ -1.54
PHC3-212	ENST00000490723	ZNF267	Q14586	743 aa	Predicted RBP	5.41	□□□□□ -1.54
PHC3-212	ENST00000490723	SF3B3	Q15393	1217 aa	Known RBP	5.41	□□□□□ -1.54
PHC3-212	ENST00000490723	TAPT1	Q6NXT6	567 aa		5.41	□□□□□ -1.54
PHC3-212	ENST00000490723		Q6ZNX1	250 aa		5.41	□□□□□ -1.54
PHC3-212	ENST00000490723	FAM90A1	Q86YD7	464 aa		5.41	□□□□□ -1.54
PHC3-212	ENST00000490723	PDSS2	Q86YH6	399 aa		5.41	□□□□□ -1.54
PHC3-212	ENST00000490723	FBXO41	Q8TF61	875 aa		5.41	□□□□□ -1.54
PHC3-212	ENST00000490723	SCAMP4	Q969E2	229 aa		5.41	□□□□□ -1.54
PHC3-212	ENST00000490723	HPS3	Q969F9	1004 aa		5.41	□□□□□ -1.54
PHC3-212	ENST00000490723	TRIB1	Q96RU8	372 aa		5.41	□□□□□ -1.54
PHC3-212	ENST00000490723	RTFDC1	Q9BY42	306 aa	Predicted RBP	5.41	□□□□□ -1.54
PHC3-212	ENST00000490723	DMTF1	Q9Y222	760 aa		5.41	□□□□□ -1.54
PHC3-212	ENST00000490723	NR2E3	Q9Y5X4	410 aa		5.41	□□□□□ -1.54
PHC3-212	ENST00000490723	MAST3	O60307	1309 aa		5.41	□□□□□ -1.54
PHC3-212	ENST00000490723	SALL3	Q9BXA9	1300 aa		5.41	□□□□□ -1.54
PHC3-212	ENST00000490723	E2F8	A0AVK6	867 aa		5.4	□□□□□ -1.54
PHC3-212	ENST00000490723	PRSS29P	A6NIE9	313 aa		5.4	□□□□□ -1.54
PHC3-212	ENST00000490723	KIAA0355	O15063	1070 aa		5.4	□□□□□ -1.54
PHC3-212	ENST00000490723	AP1G1	O43747	822 aa		5.4	□□□□□ -1.54
PHC3-212	ENST00000490723	VPS4B	O75351	444 aa		5.4	□□□□□ -1.54
PHC3-212	ENST00000490723	AHSG	P02765	367 aa		5.4	□□□□□ -1.54
PHC3-212	ENST00000490723	ALDH2	P05091	517 aa		5.4	□□□□□ -1.54
PHC3-212	ENST00000490723	TYR	P14679	529 aa		5.4	□□□□□ -1.54
PHC3-212	ENST00000490723	GATA3	P23771	443 aa		5.4	□□□□□ -1.54
PHC3-212	ENST00000490723	CXCR5	P32302	372 aa		5.4	□□□□□ -1.54
PHC3-212	ENST00000490723	ADRA1B	P35368	520 aa		5.4	□□□□□ -1.54
PHC3-212	ENST00000490723	DYRK1A	Q13627	763 aa		5.4	□□□□□ -1.54
PHC3-212	ENST00000490723	ODR4	Q5SWX8	454 aa		5.4	□□□□□ -1.54
PHC3-212	ENST00000490723	SP5	Q6BEB4	398 aa	Predicted RBP	5.4	□□□□□ -1.54
PHC3-212	ENST00000490723	PPP1R3B	Q86XI6	285 aa		5.4	□□□□□ -1.54
PHC3-212	ENST00000490723	TPH2	Q8IWU9	490 aa		5.4	□□□□□ -1.54
PHC3-212	ENST00000490723	SLC30A5	Q8TAD4	765 aa		5.4	□□□□□ -1.54
PHC3-212	ENST00000490723	MRPL46	Q9H2W6	279 aa	Known RBP	5.4	□□□□□ -1.54
PHC3-212	ENST00000490723	INTS13	Q9NVM9	706 aa		5.4	□□□□□ -1.54
PHC3-212	ENST00000490723	MRPS18A	Q9NVS2	196 aa	Known RBP	5.4	□□□□□ -1.54
PHC3-212	ENST00000490723	PNPO	Q9NVS9	261 aa		5.4	□□□□□ -1.54
PHC3-212	ENST00000490723	RLIM	Q9NVW2	624 aa		5.4	□□□□□ -1.54
PHC3-212	ENST00000490723	KCTD5	Q9NXV2	234 aa		5.4	□□□□□ -1.54
PHC3-212	ENST00000490723	ZIM2	Q9NZV7	527 aa		5.4	□□□□□ -1.54
PHC3-212	ENST00000490723	AGAP1	Q9UPQ3	857 aa		5.4	□□□□□ -1.54
PHC3-212	ENST00000490723	NEU2	Q9Y3R4	380 aa		5.4	□□□□□ -1.54
PHC3-212	ENST00000490723	MATN4	O95460	622 aa		5.39	□□□□□ -1.55
PHC3-212	ENST00000490723	RARB	P10826	455 aa		5.39	□□□□□ -1.55
PHC3-212	ENST00000490723	ANXA11	P50995	505 aa	Known RBP	5.39	□□□□□ -1.55
PHC3-212	ENST00000490723	EPHB1	P54762	984 aa		5.39	□□□□□ -1.55
PHC3-212	ENST00000490723	KIF22	Q14807	665 aa		5.39	□□□□□ -1.55
PHC3-212	ENST00000490723	ATAT1	Q5SQI0	421 aa		5.39	□□□□□ -1.55
PHC3-212	ENST00000490723	RAVER1	Q8IY67	606 aa	Known RBP	5.39	□□□□□ -1.55
PHC3-212	ENST00000490723	ADGRG5	Q8IZF4	528 aa		5.39	□□□□□ -1.55
PHC3-212	ENST00000490723	CAMKK1	Q8N5S9	505 aa		5.39	□□□□□ -1.55
PHC3-212	ENST00000490723	SNX19	Q92543	992 aa		5.39	□□□□□ -1.55
PHC3-212	ENST00000490723	SLC35A4	Q96G79	324 aa		5.39	□□□□□ -1.55
PHC3-212	ENST00000490723	CGRRF1	Q99675	332 aa		5.39	□□□□□ -1.55
PHC3-212	ENST00000490723	RIOX1	Q9H6W3	641 aa		5.39	□□□□□ -1.55
PHC3-212	ENST00000490723	ARMT1	Q9H993	441 aa		5.39	□□□□□ -1.55
PHC3-212	ENST00000490723	LRIT1	Q9P2V4	623 aa		5.39	□□□□□ -1.55
PHC3-212	ENST00000490723	PNMA8B	Q9ULN7	279 aa	Predicted RBP	5.39	□□□□□ -1.55
PHC3-212	ENST00000490723	PEX1	O43933	1283 aa		5.38	□□□□□ -1.55
PHC3-212	ENST00000490723	KIF20A	O95235	890 aa		5.38	□□□□□ -1.55
PHC3-212	ENST00000490723	GNAI2	P04899	355 aa		5.38	□□□□□ -1.55
PHC3-212	ENST00000490723	TYRP1	P17643	537 aa		5.38	□□□□□ -1.55
PHC3-212	ENST00000490723	CHRM3	P20309	590 aa		5.38	□□□□□ -1.55
PHC3-212	ENST00000490723	LPO	P22079	712 aa	Predicted RBP	5.38	□□□□□ -1.55
PHC3-212	ENST00000490723	POU6F2	P78424	691 aa	Predicted RBP	5.38	□□□□□ -1.55
PHC3-212	ENST00000490723	MRPS35	P82673	323 aa	Known RBP	5.38	□□□□□ -1.55
PHC3-212	ENST00000490723	HABP2	Q14520	560 aa	Predicted RBP	5.38	□□□□□ -1.55
PHC3-212	ENST00000490723	PLS1	Q14651	629 aa		5.38	□□□□□ -1.55
PHC3-212	ENST00000490723	ERCC6L	Q2NKX8	1250 aa		5.38	□□□□□ -1.55
PHC3-212	ENST00000490723	PLEKHG6	Q3KR16	790 aa		5.38	□□□□□ -1.55
PHC3-212	ENST00000490723	TSHZ1	Q6ZSZ6	1077 aa		5.38	□□□□□ -1.55
PHC3-212	ENST00000490723	DNAJC10	Q8IXB1	793 aa		5.38	□□□□□ -1.55
PHC3-212	ENST00000490723	LNX2	Q8N448	690 aa		5.38	□□□□□ -1.55
PHC3-212	ENST00000490723	PCSK9	Q8NBP7	692 aa	Known RBP	5.38	□□□□□ -1.55
PHC3-212	ENST00000490723	TOR1AIP2	Q8NFQ8	470 aa		5.38	□□□□□ -1.55
PHC3-212	ENST00000490723	DIS3L	Q8TF46	1054 aa	Known RBP	5.38	□□□□□ -1.55
PHC3-212	ENST00000490723	LPIN2	Q92539	896 aa		5.38	□□□□□ -1.55
PHC3-212	ENST00000490723	C1GALT1C1	Q96EU7	318 aa		5.38	□□□□□ -1.55
PHC3-212	ENST00000490723	CDK5RAP3	Q96JB5	506 aa		5.38	□□□□□ -1.55
PHC3-212	ENST00000490723	FAM167A	Q96KS9	214 aa		5.38	□□□□□ -1.55
PHC3-212	ENST00000490723	CDH19	Q9H159	772 aa		5.38	□□□□□ -1.55
PHC3-212	ENST00000490723	SLC12A5	Q9H2X9	1139 aa		5.38	□□□□□ -1.55
PHC3-212	ENST00000490723	SYNPO2L	Q9H987	977 aa		5.38	□□□□□ -1.55
PHC3-212	ENST00000490723	GPR35	Q9HC97	309 aa		5.38	□□□□□ -1.55
PHC3-212	ENST00000490723	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	5.38	□□□□□ -1.55
PHC3-212	ENST00000490723	ZDHHC8	Q9ULC8	765 aa		5.38	□□□□□ -1.55
PHC3-212	ENST00000490723	THRAP3	Q9Y2W1	955 aa	Known RBP	5.38	□□□□□ -1.55
PHC3-212	ENST00000490723		M0QYG6	137 aa		5.37	□□□□□ -1.55
PHC3-212	ENST00000490723	YY2	O15391	372 aa		5.37	□□□□□ -1.55
PHC3-212	ENST00000490723	CHEK2	O96017	543 aa		5.37	□□□□□ -1.55
PHC3-212	ENST00000490723	HSPA6	P17066	643 aa		5.37	□□□□□ -1.55
PHC3-212	ENST00000490723	NPTX2	P47972	431 aa		5.37	□□□□□ -1.55
PHC3-212	ENST00000490723	NANOS3	P60323	173 aa	Known RBP	5.37	□□□□□ -1.55
PHC3-212	ENST00000490723	NKX6-1	P78426	367 aa	Predicted RBP	5.37	□□□□□ -1.55
PHC3-212	ENST00000490723	EXOSC9	Q06265	439 aa	Known RBP	5.37	□□□□□ -1.55
PHC3-212	ENST00000490723	MICALCL	Q6ZW33	695 aa		5.37	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms