RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 LIN9Q5TKA1 542 aa16.59■□□□□ 0.25
VPS26A-207ENST00000490696 OVOS1Q6IE37 1185 aa16.59■□□□□ 0.25
VPS26A-207ENST00000490696 USP37Q86T82 979 aa16.59■□□□□ 0.25
VPS26A-207ENST00000490696 LRRC52Q8N7C0 313 aa16.59■□□□□ 0.25
VPS26A-207ENST00000490696 PLEKHO2Q8TD55 490 aa16.59■□□□□ 0.25
VPS26A-207ENST00000490696 SMARCE1Q969G3 411 aa16.59■□□□□ 0.25
VPS26A-207ENST00000490696 CCDC127Q96BQ5 260 aa16.59■□□□□ 0.25
VPS26A-207ENST00000490696 ANKRD36BP1Q96IX9 119 aa16.59■□□□□ 0.25
VPS26A-207ENST00000490696 CGRRF1Q99675 332 aa16.59■□□□□ 0.25
VPS26A-207ENST00000490696 OXCT2Q9BYC2 517 aaPredicted RBP16.59■□□□□ 0.25
VPS26A-207ENST00000490696 PRKD2Q9BZL6 878 aa16.59■□□□□ 0.25
VPS26A-207ENST00000490696 ARHGEF37A1IGU5 675 aa16.58■□□□□ 0.24
VPS26A-207ENST00000490696 CALUO43852 315 aaPredicted RBP16.58■□□□□ 0.24
VPS26A-207ENST00000490696 PRPF40AO75400 957 aaKnown RBP16.58■□□□□ 0.24
VPS26A-207ENST00000490696 TNNC2P02585 160 aa16.58■□□□□ 0.24
VPS26A-207ENST00000490696 ATF2P15336 505 aa16.58■□□□□ 0.24
VPS26A-207ENST00000490696 HOXA9P31269 272 aa16.58■□□□□ 0.24
VPS26A-207ENST00000490696 CASP4P49662 377 aa16.58■□□□□ 0.24
VPS26A-207ENST00000490696 ARPP19P56211 112 aa16.58■□□□□ 0.24
VPS26A-207ENST00000490696 UVSSAQ2YD98 709 aa16.58■□□□□ 0.24
VPS26A-207ENST00000490696 COBLL1Q53SF7 1204 aa16.58■□□□□ 0.24
VPS26A-207ENST00000490696 ZNF658Q5TYW1 1059 aaPredicted RBP16.58■□□□□ 0.24
VPS26A-207ENST00000490696 TPGS2Q68CL5 300 aa16.58■□□□□ 0.24
VPS26A-207ENST00000490696 CLEC17AQ6ZS10 378 aa16.58■□□□□ 0.24
VPS26A-207ENST00000490696 RTL10Q7L3V2 364 aa16.58■□□□□ 0.24
VPS26A-207ENST00000490696 SLC7A14Q8TBB6 771 aa16.58■□□□□ 0.24
VPS26A-207ENST00000490696 SMG7Q92540 1137 aaKnown RBP16.58■□□□□ 0.24
VPS26A-207ENST00000490696 KHSRPQ92945 711 aaKnown RBP eCLIP16.58■□□□□ 0.244e-10■□□□□ 10
VPS26A-207ENST00000490696 RPGRIP1Q96KN7 1286 aa16.58■□□□□ 0.24
VPS26A-207ENST00000490696 FNBP1Q96RU3 617 aa16.58■□□□□ 0.24
VPS26A-207ENST00000490696 DSEQ9UL01 958 aa16.58■□□□□ 0.24
VPS26A-207ENST00000490696 TSC2P49815 1807 aa16.58■□□□□ 0.24
VPS26A-207ENST00000490696 OR6C75A6NL08 312 aa16.57■□□□□ 0.24
VPS26A-207ENST00000490696 KRT19P08727 400 aa16.57■□□□□ 0.24
VPS26A-207ENST00000490696 HNRNPA1P09651 372 aaKnown RBP eCLIP16.57■□□□□ 0.24
VPS26A-207ENST00000490696 TNNI1P19237 187 aa16.57■□□□□ 0.24
VPS26A-207ENST00000490696 PRCPP42785 496 aa16.57■□□□□ 0.24
VPS26A-207ENST00000490696 CLDN10P78369 228 aa16.57■□□□□ 0.24
VPS26A-207ENST00000490696 PPM1LQ5SGD2 360 aa16.57■□□□□ 0.24
VPS26A-207ENST00000490696 WSCD1Q658N2 575 aa16.57■□□□□ 0.24
VPS26A-207ENST00000490696 TRAPPC11Q7Z392 1133 aa16.57■□□□□ 0.24
VPS26A-207ENST00000490696 PARD3BQ8TEW8 1205 aa16.57■□□□□ 0.24
VPS26A-207ENST00000490696 ZNF516Q92618 1163 aa16.57■□□□□ 0.24
VPS26A-207ENST00000490696 IPO9Q96P70 1041 aaKnown RBP16.57■□□□□ 0.24
VPS26A-207ENST00000490696 RTP3Q9BQQ7 232 aa16.57■□□□□ 0.24
VPS26A-207ENST00000490696 WDR6Q9NNW5 1121 aaKnown RBP16.57■□□□□ 0.24
VPS26A-207ENST00000490696 GDAP2Q9NXN4 497 aa16.57■□□□□ 0.24
VPS26A-207ENST00000490696 DENND4AQ7Z401 1863 aa16.56■□□□□ 0.24
VPS26A-207ENST00000490696 MAPK13O15264 365 aa16.56■□□□□ 0.24
VPS26A-207ENST00000490696 POU2F2P09086 479 aa16.56■□□□□ 0.24
VPS26A-207ENST00000490696 OR4Q2P0C623 313 aa16.56■□□□□ 0.24
VPS26A-207ENST00000490696 SP100P23497 879 aaPredicted RBP16.56■□□□□ 0.24
VPS26A-207ENST00000490696 NR2F2P24468 414 aa16.56■□□□□ 0.24
VPS26A-207ENST00000490696 BFSP1Q12934 665 aa16.56■□□□□ 0.24
VPS26A-207ENST00000490696 CCDC149Q6ZUS6 474 aa16.56■□□□□ 0.24
VPS26A-207ENST00000490696 TCEAL8Q8IYN2 117 aa16.56■□□□□ 0.24
VPS26A-207ENST00000490696 OR10T2Q8NGX3 314 aa16.56■□□□□ 0.24
VPS26A-207ENST00000490696 GTPBP4Q9BZE4 634 aaKnown RBP16.56■□□□□ 0.24
VPS26A-207ENST00000490696 AFF4Q9UHB7 1163 aaKnown RBP16.56■□□□□ 0.24
VPS26A-207ENST00000490696 MAN1B1Q9UKM7 699 aa16.56■□□□□ 0.24
VPS26A-207ENST00000490696 MAFFQ9ULX9 164 aa16.56■□□□□ 0.24
VPS26A-207ENST00000490696 USTQ9Y2C2 406 aa16.56■□□□□ 0.24
VPS26A-207ENST00000490696 DOCK6Q96HP0 2047 aa16.56■□□□□ 0.24
VPS26A-207ENST00000490696 LRRIQ3A6PVS8 624 aaPredicted RBP16.55■□□□□ 0.24
VPS26A-207ENST00000490696 C2CD4DB7Z1M9 353 aa16.55■□□□□ 0.24
VPS26A-207ENST00000490696 ABCB7O75027 752 aa16.55■□□□□ 0.24
VPS26A-207ENST00000490696 AKAP3O75969 853 aa16.55■□□□□ 0.24
VPS26A-207ENST00000490696 SEC24AO95486 1093 aa16.55■□□□□ 0.24
VPS26A-207ENST00000490696 VNN2O95498 520 aa16.55■□□□□ 0.24
VPS26A-207ENST00000490696 CPB1P15086 417 aa16.55■□□□□ 0.24
VPS26A-207ENST00000490696 ADCY1Q08828 1119 aa16.55■□□□□ 0.24
VPS26A-207ENST00000490696 GPR17Q13304 367 aa16.55■□□□□ 0.24
VPS26A-207ENST00000490696 EDRF1Q3B7T1 1238 aa16.55■□□□□ 0.24
VPS26A-207ENST00000490696 CEP135Q66GS9 1140 aa16.55■□□□□ 0.24
VPS26A-207ENST00000490696 CENPPQ6IPU0 288 aa16.55■□□□□ 0.24
VPS26A-207ENST00000490696 RNF19BQ6ZMZ0 732 aa16.55■□□□□ 0.24
VPS26A-207ENST00000490696 METTL23Q86XA0 190 aa16.55■□□□□ 0.24
VPS26A-207ENST00000490696 RNF135Q8IUD6 432 aa16.55■□□□□ 0.24
VPS26A-207ENST00000490696 ADSSL1Q8N142 457 aa16.55■□□□□ 0.24
VPS26A-207ENST00000490696 PDCL2Q8N4E4 241 aa16.55■□□□□ 0.24
VPS26A-207ENST00000490696 TMC2Q8TDI7 906 aa16.55■□□□□ 0.24
VPS26A-207ENST00000490696 HPDLQ96IR7 371 aa16.55■□□□□ 0.24
VPS26A-207ENST00000490696 TMEM209Q96SK2 561 aa16.55■□□□□ 0.24
VPS26A-207ENST00000490696 PIDD1Q9HB75 910 aa16.55■□□□□ 0.24
VPS26A-207ENST00000490696 TSHZ2Q9NRE2 1034 aa16.55■□□□□ 0.24
VPS26A-207ENST00000490696 L1RE1Q9UN81 338 aa16.55■□□□□ 0.24
VPS26A-207ENST00000490696 FRMD4BQ9Y2L6 1034 aa16.55■□□□□ 0.24
VPS26A-207ENST00000490696 NR2E1Q9Y466 385 aa16.55■□□□□ 0.24
VPS26A-207ENST00000490696 SNX9Q9Y5X1 595 aa16.55■□□□□ 0.24
VPS26A-207ENST00000490696 CLUHO75153 1309 aa16.54■□□□□ 0.24
VPS26A-207ENST00000490696 PRRG1O14668 218 aa16.54■□□□□ 0.24
VPS26A-207ENST00000490696 CCL16O15467 120 aa16.54■□□□□ 0.24
VPS26A-207ENST00000490696 CST3P01034 146 aaPredicted RBP16.54■□□□□ 0.24
VPS26A-207ENST00000490696 BMP6P22004 513 aa16.54■□□□□ 0.24
VPS26A-207ENST00000490696 RPL13P26373 211 aaKnown RBP16.54■□□□□ 0.24
VPS26A-207ENST00000490696 ELF1P32519 619 aa16.54■□□□□ 0.24
VPS26A-207ENST00000490696 DLG4P78352 724 aa16.54■□□□□ 0.24
VPS26A-207ENST00000490696 MYO1EQ12965 1108 aa16.54■□□□□ 0.24
VPS26A-207ENST00000490696 ADAM9Q13443 819 aa16.54■□□□□ 0.24
VPS26A-207ENST00000490696 C1orf220Q5T0J3 134 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms