RNA–Protein interactions for RNA: ENST00000490444.2

PUM3-204, Transcript of pumilio RNA binding family member 3, human

TSL 5

Gene PUM3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM3-204	ENST00000490444	L1TD1	Q5T7N2	865 aa	Known RBP	3.1	□□□□□ -1.91
PUM3-204	ENST00000490444	CYB5RL	Q6IPT4	315 aa		3.1	□□□□□ -1.91
PUM3-204	ENST00000490444	C1QL2	Q7Z5L3	287 aa		3.1	□□□□□ -1.91
PUM3-204	ENST00000490444	SLC35G2	Q8TBE7	412 aa		3.1	□□□□□ -1.91
PUM3-204	ENST00000490444	DIS3L	Q8TF46	1054 aa	Known RBP	3.1	□□□□□ -1.91
PUM3-204	ENST00000490444	PPM1E	Q8WY54	764 aa		3.1	□□□□□ -1.91
PUM3-204	ENST00000490444	TMX3	Q96JJ7	454 aa		3.1	□□□□□ -1.91
PUM3-204	ENST00000490444	DCLRE1C	Q96SD1	692 aa	Known RBP	3.1	□□□□□ -1.91
PUM3-204	ENST00000490444	UHRF1	Q96T88	793 aa	Predicted RBP	3.1	□□□□□ -1.91
PUM3-204	ENST00000490444	LRFN3	Q9BTN0	628 aa		3.1	□□□□□ -1.91
PUM3-204	ENST00000490444	NDC1	Q9BTX1	674 aa		3.1	□□□□□ -1.91
PUM3-204	ENST00000490444	C1QTNF7	Q9BXJ2	289 aa		3.1	□□□□□ -1.91
PUM3-204	ENST00000490444	SENP6	Q9GZR1	1112 aa	Predicted RBP	3.1	□□□□□ -1.91
PUM3-204	ENST00000490444	ZHX3	Q9H4I2	956 aa		3.1	□□□□□ -1.91
PUM3-204	ENST00000490444	SERHL2	Q9H4I8	314 aa		3.1	□□□□□ -1.91
PUM3-204	ENST00000490444	ZNF768	Q9H5H4	540 aa	Known RBP	3.1	□□□□□ -1.91
PUM3-204	ENST00000490444	TDP1	Q9NUW8	608 aa		3.1	□□□□□ -1.91
PUM3-204	ENST00000490444	TRPM5	Q9NZQ8	1165 aa		3.1	□□□□□ -1.91
PUM3-204	ENST00000490444	CALCOCO1	Q9P1Z2	691 aa		3.1	□□□□□ -1.91
PUM3-204	ENST00000490444	TES	Q9UGI8	421 aa	Known RBP	3.1	□□□□□ -1.91
PUM3-204	ENST00000490444	NOB1	Q9ULX3	412 aa	Known RBP	3.1	□□□□□ -1.91
PUM3-204	ENST00000490444	CHST2	Q9Y4C5	530 aa		3.1	□□□□□ -1.91
PUM3-204	ENST00000490444	SCIN	Q9Y6U3	715 aa		3.1	□□□□□ -1.91
PUM3-204	ENST00000490444	CLSPN	Q9HAW4	1339 aa		3.1	□□□□□ -1.91
PUM3-204	ENST00000490444	CFAP69	A5D8W1	941 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	PRSS29P	A6NIE9	313 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	AHRR	A9YTQ3	701 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	LEFTY2	O00292	366 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	IFRD1	O00458	451 aa	Predicted RBP	3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	RNASET2	O00584	256 aa	Known RBP	3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	AP1G1	O43747	822 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	LPXN	O60711	386 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	PRSS23	O95084	383 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	C1R	P00736	705 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	ALDH2	P05091	517 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	SNRPA1	P09661	255 aa	Known RBP	3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	MAL	P21145	153 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	APOBEC3A	P31941	199 aa	Predicted RBP	3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	COPB2	P35606	906 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	POU5F1	Q01860	360 aa	Known RBP	3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	GALE	Q14376	348 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	ERCC6L	Q2NKX8	1250 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	PGS1	Q32NB8	556 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	FLYWCH1	Q4VC44	716 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	KHDC1	Q4VXA5	237 aa	Known RBP	3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	SYCP2L	Q5T4T6	812 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	IFIT1B	Q5T764	474 aa	Known RBP	3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	FAM102A	Q5T9C2	384 aa	Predicted RBP	3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	CRELD2	Q6UXH1	353 aa	Predicted RBP	3.09	□□□□□ -1.91
PUM3-204	ENST00000490444		Q6YL49	198 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	TTC7B	Q86TV6	843 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	DRC7	Q8IY82	874 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	SRRM1	Q8IYB3	904 aa	Known RBP	3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	RNF169	Q8NCN4	708 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	PLBD2	Q8NHP8	589 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	TFAP2C	Q92754	450 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	CAVIN3	Q969G5	261 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	CLPTM1L	Q96KA5	538 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	ADGRE3	Q9BY15	652 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	WDR11	Q9BZH6	1224 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	NMRK2	Q9NPI5	230 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	TMEM140	Q9NV12	185 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	FBXO34	Q9NWN3	711 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	MOCS1	Q9NZB8	636 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	ANKFY1	Q9P2R3	1169 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	CLCA2	Q9UQC9	943 aa		3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	RUVBL1	Q9Y265	456 aa	Known RBP	3.09	□□□□□ -1.91
PUM3-204	ENST00000490444	GAGE12B	A1L429	117 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	CCDC78	A2IDD5	438 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	GAGE12H	A6NDE8	117 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	TMEM200C	A6NKL6	621 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	DRGX	A6NNA5	263 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444		A6NNZ2	444 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	PRR5-ARHGAP8	B1AHC4	643 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444		H3BML4	177 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	F2RL2	O00254	374 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	TCERG1	O14776	1098 aa	Known RBP	3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	ZNF185	O15231	689 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	GRM6	O15303	877 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	SLC16A6	O15403	523 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	TEX33	O43247	280 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	OFD1	O75665	1012 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	NDUFA10	O95299	355 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	MYL1	P05976	194 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	CBSL	P0DN79	551 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	RAP2A	P10114	183 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	ATP5J	P18859	108 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	SLC6A2	P23975	617 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	CBS	P35520	551 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	NKX6-1	P78426	367 aa	Predicted RBP	3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	FAM189B	P81408	668 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	NOG	Q13253	232 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	UBXN2B	Q14CS0	331 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	MLC1	Q15049	377 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	PPP4R3A	Q6IN85	833 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	ZNF529	Q6P280	563 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	CCDC174	Q6PII3	467 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	OVCH2	Q7RTZ1	564 aa		3.08	□□□□□ -1.92
PUM3-204	ENST00000490444	GDF7	Q7Z4P5	450 aa		3.08	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms