RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 FMR1NBQ8N0W7 255 aaPredicted RBP19.57■□□□□ 0.72
COL9A3-214ENST00000490398 ENGASEQ8NFI3 743 aa19.57■□□□□ 0.72
COL9A3-214ENST00000490398 KCTD10Q9H3F6 313 aa19.57■□□□□ 0.72
COL9A3-214ENST00000490398 INTS13Q9NVM9 706 aa19.57■□□□□ 0.72
COL9A3-214ENST00000490398 DOCK6Q96HP0 2047 aa19.57■□□□□ 0.72
COL9A3-214ENST00000490398 TECTAO75443 2155 aa19.56■□□□□ 0.72
COL9A3-214ENST00000490398 ARHGEF37A1IGU5 675 aa19.56■□□□□ 0.72
COL9A3-214ENST00000490398 KPNA7A9QM74 516 aa19.56■□□□□ 0.72
COL9A3-214ENST00000490398 KIAA0391O15091 583 aaKnown RBP19.56■□□□□ 0.72
COL9A3-214ENST00000490398 CYP11A1P05108 521 aa19.56■□□□□ 0.72
COL9A3-214ENST00000490398 FSHRP23945 695 aa19.56■□□□□ 0.72
COL9A3-214ENST00000490398 SNW1Q13573 536 aaKnown RBP19.56■□□□□ 0.72
COL9A3-214ENST00000490398 TPGS2Q68CL5 300 aa19.56■□□□□ 0.72
COL9A3-214ENST00000490398 TRIM67Q6ZTA4 783 aa19.56■□□□□ 0.72
COL9A3-214ENST00000490398 C12orf56Q8IXR9 622 aa19.56■□□□□ 0.72
COL9A3-214ENST00000490398 CSGALNACT2Q8N6G5 542 aa19.56■□□□□ 0.72
COL9A3-214ENST00000490398 TTC9BQ8N6N2 239 aa19.56■□□□□ 0.72
COL9A3-214ENST00000490398 XXYLT1Q8NBI6 393 aa19.56■□□□□ 0.72
COL9A3-214ENST00000490398 ACSF2Q96CM8 615 aaPredicted RBP19.56■□□□□ 0.72
COL9A3-214ENST00000490398 AFF4Q9UHB7 1163 aaKnown RBP19.56■□□□□ 0.72
COL9A3-214ENST00000490398 INSL5Q9Y5Q6 135 aa19.56■□□□□ 0.72
COL9A3-214ENST00000490398 TSC2P49815 1807 aa19.55■□□□□ 0.72
COL9A3-214ENST00000490398 WDFY4Q6ZS81 3184 aa19.55■□□□□ 0.72
COL9A3-214ENST00000490398 PRRG1O14668 218 aa19.55■□□□□ 0.72
COL9A3-214ENST00000490398 ELF1P32519 619 aa19.55■□□□□ 0.72
COL9A3-214ENST00000490398 CASP4P49662 377 aa19.55■□□□□ 0.72
COL9A3-214ENST00000490398 CYP24A1Q07973 514 aa19.55■□□□□ 0.72
COL9A3-214ENST00000490398 PSMD2Q13200 908 aa19.55■□□□□ 0.72
COL9A3-214ENST00000490398 SLC5A9Q2M3M2 681 aa19.55■□□□□ 0.72
COL9A3-214ENST00000490398 HFE2Q6ZVN8 426 aa19.55■□□□□ 0.72
COL9A3-214ENST00000490398 HS2ST1Q7LGA3 356 aa19.55■□□□□ 0.72
COL9A3-214ENST00000490398 PLCD3Q8N3E9 789 aa19.55■□□□□ 0.72
COL9A3-214ENST00000490398 ZNF516Q92618 1163 aa19.55■□□□□ 0.72
COL9A3-214ENST00000490398 ERCC4Q92889 916 aaPredicted RBP19.55■□□□□ 0.72
COL9A3-214ENST00000490398 CCDC127Q96BQ5 260 aa19.55■□□□□ 0.72
COL9A3-214ENST00000490398 KCNK12Q9HB15 430 aa19.55■□□□□ 0.72
COL9A3-214ENST00000490398 EPS15L1Q9UBC2 864 aa19.55■□□□□ 0.72
COL9A3-214ENST00000490398 MAPK8IP1Q9UQF2 711 aa19.55■□□□□ 0.72
COL9A3-214ENST00000490398 SLC27A5Q9Y2P5 690 aa19.55■□□□□ 0.72
COL9A3-214ENST00000490398 TMEM221A6NGB7 291 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 OR6C75A6NL08 312 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 PRR33A8MZF0 331 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 M0R296 226 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 HCRTO43612 131 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 XYLBO75191 536 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 SOAT2O75908 522 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 RHOBTB3O94955 611 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 MYL1P05976 194 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 KRT19P08727 400 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 POU2F2P09086 479 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 TMEM191BP0C7N4 346 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 DLATP10515 647 aaKnown RBP19.54■□□□□ 0.72
COL9A3-214ENST00000490398 COL9A1P20849 921 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 BFSP1Q12934 665 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 DUSP4Q13115 394 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 GPR17Q13304 367 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 PNOCQ13519 176 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 PSMD6Q15008 389 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 SV2CQ496J9 727 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 LRRTM3Q86VH5 581 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 OSTM1Q86WC4 334 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 HS6ST3Q8IZP7 471 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 ATAD1Q8NBU5 361 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 CACTINQ8WUQ7 758 aaKnown RBP19.54■□□□□ 0.72
COL9A3-214ENST00000490398 ASIC4Q96FT7 647 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 KIAA1586Q9HCI6 787 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 DMAC2Q9NW81 257 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 CEP72Q9P209 647 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 ITGA11Q9UKX5 1188 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 L1RE1Q9UN81 338 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 SORCS3Q9UPU3 1222 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 NOTCH4Q99466 2003 aa19.54■□□□□ 0.72
COL9A3-214ENST00000490398 MTMR11A4FU01 709 aa19.53■□□□□ 0.72
COL9A3-214ENST00000490398 NARSO43776 548 aaKnown RBP19.53■□□□□ 0.72
COL9A3-214ENST00000490398 GADD45BO75293 160 aaPredicted RBP19.53■□□□□ 0.72
COL9A3-214ENST00000490398 CST3P01034 146 aaPredicted RBP19.53■□□□□ 0.72
COL9A3-214ENST00000490398 PDGFBP01127 241 aaPredicted RBP19.53■□□□□ 0.72
COL9A3-214ENST00000490398 LAMP2P13473 410 aa19.53■□□□□ 0.72
COL9A3-214ENST00000490398 CCR2P41597 374 aa19.53■□□□□ 0.72
COL9A3-214ENST00000490398 SNRPFP62306 86 aaKnown RBP19.53■□□□□ 0.72
COL9A3-214ENST00000490398 TWF1Q12792 350 aa19.53■□□□□ 0.72
COL9A3-214ENST00000490398 CCDC142Q17RM4 750 aa19.53■□□□□ 0.72
COL9A3-214ENST00000490398 CENPPQ6IPU0 288 aa19.53■□□□□ 0.72
COL9A3-214ENST00000490398 SMYD4Q8IYR2 804 aaPredicted RBP19.53■□□□□ 0.72
COL9A3-214ENST00000490398 PDCL2Q8N4E4 241 aa19.53■□□□□ 0.72
COL9A3-214ENST00000490398 ING5Q8WYH8 240 aa19.53■□□□□ 0.72
COL9A3-214ENST00000490398 TCEAL4Q96EI5 215 aa19.53■□□□□ 0.72
COL9A3-214ENST00000490398 MFSD14AQ96MC6 490 aa19.53■□□□□ 0.72
COL9A3-214ENST00000490398 RPP25Q9BUL9 199 aaKnown RBP19.53■□□□□ 0.72
COL9A3-214ENST00000490398 TMLHEQ9NVH6 421 aa19.53■□□□□ 0.72
COL9A3-214ENST00000490398 YIPF1Q9Y548 306 aa19.53■□□□□ 0.72
COL9A3-214ENST00000490398 EXOC3O60645 756 aa19.52■□□□□ 0.72
COL9A3-214ENST00000490398 LRG1P02750 347 aa19.52■□□□□ 0.72
COL9A3-214ENST00000490398 RHOP08100 348 aa19.52■□□□□ 0.72
COL9A3-214ENST00000490398 PAX3P23760 479 aa19.52■□□□□ 0.72
COL9A3-214ENST00000490398 RBP5P82980 135 aa19.52■□□□□ 0.72
COL9A3-214ENST00000490398 MYBPC2Q14324 1141 aa19.52■□□□□ 0.72
COL9A3-214ENST00000490398 DUOXA2Q1HG44 320 aa19.52■□□□□ 0.72
COL9A3-214ENST00000490398 PABPC1LQ4VXU2 614 aaKnown RBP19.52■□□□□ 0.72
COL9A3-214ENST00000490398 SLC39A12Q504Y0 691 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms