RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, human

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMC4-222	ENST00000490207	CACTIN	Q8WUQ7	758 aa	Known RBP	21.33	■■□□□ 1.01
SMC4-222	ENST00000490207	SCFD1	Q8WVM8	642 aa		21.33	■■□□□ 1.01
SMC4-222	ENST00000490207	FGF13	Q92913	245 aa		21.33	■■□□□ 1.01
SMC4-222	ENST00000490207	PGLYRP2	Q96PD5	576 aa		21.33	■■□□□ 1.01
SMC4-222	ENST00000490207	PDE11A	Q9HCR9	933 aa		21.33	■■□□□ 1.01
SMC4-222	ENST00000490207	DSE	Q9UL01	958 aa		21.33	■■□□□ 1.01
SMC4-222	ENST00000490207	MRPS23	Q9Y3D9	190 aa	Known RBP	21.33	■■□□□ 1.01
SMC4-222	ENST00000490207	ANHX	E9PGG2	379 aa		21.32	■■□□□ 1
SMC4-222	ENST00000490207	CYB561D2	O14569	222 aa		21.32	■■□□□ 1
SMC4-222	ENST00000490207	NARS	O43776	548 aa	Known RBP	21.32	■■□□□ 1
SMC4-222	ENST00000490207	ITGB3	P05106	788 aa		21.32	■■□□□ 1
SMC4-222	ENST00000490207	TMEM191B	P0C7N4	346 aa		21.32	■■□□□ 1
SMC4-222	ENST00000490207	PTPN2	P17706	415 aa		21.32	■■□□□ 1
SMC4-222	ENST00000490207	PNPLA4	P41247	253 aa		21.32	■■□□□ 1
SMC4-222	ENST00000490207	TWF1	Q12792	350 aa		21.32	■■□□□ 1
SMC4-222	ENST00000490207	METTL23	Q86XA0	190 aa		21.32	■■□□□ 1
SMC4-222	ENST00000490207	C1orf127	Q8N9H9	656 aa		21.32	■■□□□ 1
SMC4-222	ENST00000490207	ING5	Q8WYH8	240 aa		21.32	■■□□□ 1
SMC4-222	ENST00000490207	PAGE5	Q96GU1	130 aa		21.32	■■□□□ 1
SMC4-222	ENST00000490207	CORO1B	Q9BR76	489 aa		21.32	■■□□□ 1
SMC4-222	ENST00000490207	SCAND2P	Q9GZW5	306 aa	Predicted RBP	21.32	■■□□□ 1
SMC4-222	ENST00000490207	SLC39A2	Q9NP94	309 aa		21.32	■■□□□ 1
SMC4-222	ENST00000490207	AVEN	Q9NQS1	362 aa	Predicted RBP	21.32	■■□□□ 1
SMC4-222	ENST00000490207	USP25	Q9UHP3	1055 aa		21.32	■■□□□ 1
SMC4-222	ENST00000490207	HPSE	Q9Y251	543 aa		21.32	■■□□□ 1
SMC4-222	ENST00000490207	YIPF1	Q9Y548	306 aa		21.32	■■□□□ 1
SMC4-222	ENST00000490207	NUMBL	Q9Y6R0	609 aa		21.32	■■□□□ 1
SMC4-222	ENST00000490207	TGFB1I1	O43294	461 aa		21.31	■■□□□ 1
SMC4-222	ENST00000490207	VNN2	O95498	520 aa		21.31	■■□□□ 1
SMC4-222	ENST00000490207	PLA2G5	P39877	138 aa		21.31	■■□□□ 1
SMC4-222	ENST00000490207	VCP	P55072	806 aa	Known RBP	21.31	■■□□□ 1
SMC4-222	ENST00000490207	GPR17	Q13304	367 aa		21.31	■■□□□ 1
SMC4-222	ENST00000490207	BMT2	Q1RMZ1	405 aa		21.31	■■□□□ 1
SMC4-222	ENST00000490207	SLC5A9	Q2M3M2	681 aa		21.31	■■□□□ 1
SMC4-222	ENST00000490207	MTSS1L	Q765P7	747 aa		21.31	■■□□□ 1
SMC4-222	ENST00000490207	CBWD2	Q8IUF1	395 aa		21.31	■■□□□ 1
SMC4-222	ENST00000490207	NPAS3	Q8IXF0	933 aa		21.31	■■□□□ 1
SMC4-222	ENST00000490207	PIAS4	Q8N2W9	510 aa	Predicted RBP	21.31	■■□□□ 1
SMC4-222	ENST00000490207	OR10T2	Q8NGX3	314 aa		21.31	■■□□□ 1
SMC4-222	ENST00000490207	FAM122A	Q96E09	287 aa		21.31	■■□□□ 1
SMC4-222	ENST00000490207	FAM84A	Q96KN4	292 aa		21.31	■■□□□ 1
SMC4-222	ENST00000490207	TMEM209	Q96SK2	561 aa		21.31	■■□□□ 1
SMC4-222	ENST00000490207	MTMR12	Q9C0I1	747 aa		21.31	■■□□□ 1
SMC4-222	ENST00000490207	KCNH6	Q9H252	994 aa		21.31	■■□□□ 1
SMC4-222	ENST00000490207	KIAA1586	Q9HCI6	787 aa		21.31	■■□□□ 1
SMC4-222	ENST00000490207	AGPAT3	Q9NRZ7	376 aa		21.31	■■□□□ 1
SMC4-222	ENST00000490207	EXOC1	Q9NV70	894 aa		21.31	■■□□□ 1
SMC4-222	ENST00000490207	FBXL21	Q9UKT6	434 aa		21.31	■■□□□ 1
SMC4-222	ENST00000490207	ITGA11	Q9UKX5	1188 aa		21.31	■■□□□ 1
SMC4-222	ENST00000490207	AGAP1	Q9UPQ3	857 aa		21.31	■■□□□ 1
SMC4-222	ENST00000490207	MTMR11	A4FU01	709 aa		21.3	■■□□□ 1
SMC4-222	ENST00000490207	ZNF233	A6NK53	670 aa		21.3	■■□□□ 1
SMC4-222	ENST00000490207	KPNA7	A9QM74	516 aa		21.3	■■□□□ 1
SMC4-222	ENST00000490207	KLRC4	O43908	158 aa		21.3	■■□□□ 1
SMC4-222	ENST00000490207	CEBPB	P17676	345 aa		21.3	■■□□□ 1
SMC4-222	ENST00000490207	SNRPF	P62306	86 aa	Known RBP	21.3	■■□□□ 1
SMC4-222	ENST00000490207	PLD1	Q13393	1074 aa		21.3	■■□□□ 1
SMC4-222	ENST00000490207	SURF1	Q15526	300 aa		21.3	■■□□□ 1
SMC4-222	ENST00000490207	LMBRD2	Q68DH5	695 aa	Predicted RBP	21.3	■■□□□ 1
SMC4-222	ENST00000490207	IQCE	Q6IPM2	695 aa		21.3	■■□□□ 1
SMC4-222	ENST00000490207	PDZD4	Q76G19	769 aa	Predicted RBP	21.3	■■□□□ 1
SMC4-222	ENST00000490207	HS2ST1	Q7LGA3	356 aa		21.3	■■□□□ 1
SMC4-222	ENST00000490207	SLC44A3	Q8N4M1	653 aa		21.3	■■□□□ 1
SMC4-222	ENST00000490207	ST13P5	Q8NFI4	369 aa	Predicted RBP	21.3	■■□□□ 1
SMC4-222	ENST00000490207	FGF14	Q92915	247 aa		21.3	■■□□□ 1
SMC4-222	ENST00000490207	ANKRD36BP1	Q96IX9	119 aa		21.3	■■□□□ 1
SMC4-222	ENST00000490207	MFSD1	Q9H3U5	465 aa		21.3	■■□□□ 1
SMC4-222	ENST00000490207	FAM237A	A0A1B0GTK4	181 aa		21.29	■■□□□ 1
SMC4-222	ENST00000490207	CLIC2	O15247	247 aa		21.29	■■□□□ 1
SMC4-222	ENST00000490207	KRT19	P08727	400 aa		21.29	■■□□□ 1
SMC4-222	ENST00000490207	SRF	P11831	508 aa		21.29	■■□□□ 1
SMC4-222	ENST00000490207	SYK	P43405	635 aa		21.29	■■□□□ 1
SMC4-222	ENST00000490207	CYP2J2	P51589	502 aa		21.29	■■□□□ 1
SMC4-222	ENST00000490207	BFSP1	Q12934	665 aa		21.29	■■□□□ 1
SMC4-222	ENST00000490207	PRSS36	Q5K4E3	855 aa		21.29	■■□□□ 1
SMC4-222	ENST00000490207	WSCD1	Q658N2	575 aa		21.29	■■□□□ 1
SMC4-222	ENST00000490207	PARM1	Q6UWI2	310 aa		21.29	■■□□□ 1
SMC4-222	ENST00000490207	THEM5	Q8N1Q8	247 aa		21.29	■■□□□ 1
SMC4-222	ENST00000490207	LRRC52	Q8N7C0	313 aa		21.29	■■□□□ 1
SMC4-222	ENST00000490207	BORCS6	Q96GS4	357 aa		21.29	■■□□□ 1
SMC4-222	ENST00000490207	ZNF512	Q96ME7	567 aa	Predicted RBP	21.29	■■□□□ 1
SMC4-222	ENST00000490207	CRISPLD1	Q9H336	500 aa		21.29	■■□□□ 1
SMC4-222	ENST00000490207	INTS13	Q9NVM9	706 aa		21.29	■■□□□ 1
SMC4-222	ENST00000490207	CEP72	Q9P209	647 aa		21.29	■■□□□ 1
SMC4-222	ENST00000490207	PTPRJ	Q12913	1337 aa		21.29	■■□□□ 1
SMC4-222	ENST00000490207	TNNC2	P02585	160 aa		21.28	■■□□□ 1
SMC4-222	ENST00000490207	MYL1	P05976	194 aa		21.28	■■□□□ 1
SMC4-222	ENST00000490207	CFH	P08603	1231 aa		21.28	■■□□□ 1
SMC4-222	ENST00000490207	NDUFA8	P51970	172 aa		21.28	■■□□□ 1
SMC4-222	ENST00000490207	DUSP4	Q13115	394 aa		21.28	■■□□□ 1
SMC4-222	ENST00000490207	SNRNP35	Q16560	246 aa	Known RBP	21.28	■■□□□ 1
SMC4-222	ENST00000490207	KMT5B	Q4FZB7	885 aa		21.28	■■□□□ 1
SMC4-222	ENST00000490207	CSGALNACT2	Q8N6G5	542 aa		21.28	■■□□□ 1
SMC4-222	ENST00000490207	FSIP1	Q8NA03	581 aa		21.28	■■□□□ 1
SMC4-222	ENST00000490207	CXorf38	Q8TB03	319 aa		21.28	■■□□□ 1
SMC4-222	ENST00000490207	RTP3	Q9BQQ7	232 aa		21.28	■■□□□ 1
SMC4-222	ENST00000490207	ZCWPW1	Q9H0M4	648 aa		21.28	■■□□□ 1
SMC4-222	ENST00000490207	ASAH2	Q9NR71	780 aa		21.28	■■□□□ 1
SMC4-222	ENST00000490207	CGN	Q9P2M7	1197 aa	Known RBP	21.28	■■□□□ 1
SMC4-222	ENST00000490207	ZDBF2	Q9HCK1	2354 aa		21.28	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms