RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 PPP1R3BQ86XI6 285 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 SIRT2Q8IXJ6 389 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 SP8Q8IXZ3 490 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 CISD2Q8N5K1 135 aaKnown RBP3.38□□□□□ -1.87
UBXN4-208ENST00000490163 HHIPL1Q96JK4 782 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 JMJD8Q96S16 334 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 EIF2AK1Q9BQI3 630 aaKnown RBP3.38□□□□□ -1.87
UBXN4-208ENST00000490163 JAM3Q9BX67 310 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 C14orf93Q9H972 538 aaKnown RBP3.38□□□□□ -1.87
UBXN4-208ENST00000490163 MRPL44Q9H9J2 332 aaKnown RBP3.38□□□□□ -1.87
UBXN4-208ENST00000490163 PNPLA8Q9NP80 782 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 NDUFAF4Q9P032 175 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 TCFL5Q9UL49 500 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 PA2G4Q9UQ80 394 aaKnown RBP3.38□□□□□ -1.87
UBXN4-208ENST00000490163 RAXQ9Y2V3 346 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 CCDC18Q5T9S5 1454 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 DIP2BQ9P265 1576 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 PRR19A6NJB7 356 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 DGKIO75912 1065 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 GASTP01350 101 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 VIPR2P41587 438 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 MAPK9P45984 424 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 SEPHS1P49903 392 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 SPIDRQ14159 915 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 PAN2Q504Q3 1202 aaKnown RBP3.38□□□□□ -1.87
UBXN4-208ENST00000490163 ULK2Q8IYT8 1036 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 MAML2Q8IZL2 1156 aaPredicted RBP3.38□□□□□ -1.87
UBXN4-208ENST00000490163 SLC2A12Q8TD20 617 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 TSGA13Q96PP4 275 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 KCNC2Q96PR1 638 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 MYL10Q9BUA6 226 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 KCNH6Q9H252 994 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 TNFRSF12AQ9NP84 129 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 PRDM5Q9NQX1 630 aaPredicted RBP3.38□□□□□ -1.87
UBXN4-208ENST00000490163 ABCF3Q9NUQ8 709 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 LPAR3Q9UBY5 353 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 COG5Q9UP83 839 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 CLDN16Q9Y5I7 305 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 NR2E3Q9Y5X4 410 aa3.38□□□□□ -1.87
UBXN4-208ENST00000490163 NUP153P49790 1475 aaKnown RBP3.38□□□□□ -1.87
UBXN4-208ENST00000490163 NRP2O60462 931 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 DNAJB5O75953 348 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 HDCP19113 662 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 CASP6P55212 293 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 STARD3Q14849 445 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 BTBD8Q5XKL5 378 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 HEATR3Q7Z4Q2 680 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 RTKN2Q8IZC4 609 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 MFSD4AQ8N468 514 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 AFAP1L1Q8TED9 768 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 HVCN1Q96D96 273 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 CEP41Q9BYV8 373 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 SCPEP1Q9HB40 452 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 HELLSQ9NRZ9 838 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 TMLHEQ9NVH6 421 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 MTO1Q9Y2Z2 717 aaKnown RBP3.37□□□□□ -1.87
UBXN4-208ENST00000490163 VWA7Q9Y334 891 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 FRMPD1Q5SYB0 1578 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 RICTORQ6R327 1708 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 ABCC10Q5T3U5 1492 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.37□□□□□ -1.87
UBXN4-208ENST00000490163 A0A1W2PQF6 199 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 ZNF839A8K0R7 811 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 OR2C1O95371 312 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 POLBP06746 335 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 RPS2P15880 293 aaKnown RBP3.37□□□□□ -1.87
UBXN4-208ENST00000490163 ALOX15P16050 662 aaPredicted RBP3.37□□□□□ -1.87
UBXN4-208ENST00000490163 RXRBP28702 533 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 UBE3AQ05086 875 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 CUL4AQ13619 759 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 ZNF765Q7L2R6 523 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 GET4Q7L5D6 327 aaPredicted RBP3.37□□□□□ -1.87
UBXN4-208ENST00000490163 FAM126BQ8IXS8 530 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 DNERQ8NFT8 737 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 DSCC1Q9BVC3 393 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 SPATA5L1Q9BVQ7 753 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 ZBTB26Q9HCK0 441 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 HCN3Q9P1Z3 774 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 C5AR2Q9P296 337 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 TBC1D29Q9UFV1 150 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 SYNPO2Q9UMS6 1093 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 TCOF1Q13428 1488 aaKnown RBP3.37□□□□□ -1.87
UBXN4-208ENST00000490163 CEP162Q5TB80 1403 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 ZNF644Q9H582 1327 aaPredicted RBP3.37□□□□□ -1.87
UBXN4-208ENST00000490163 A0A0U1RQG5 324 aaPredicted RBP3.37□□□□□ -1.87
UBXN4-208ENST00000490163 WIPF3A6NGB9 483 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 PLOD2O00469 737 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 RPLP2P05387 115 aaKnown RBP3.37□□□□□ -1.87
UBXN4-208ENST00000490163 CHMP24386 653 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 DDR1Q08345 913 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 CDC16Q13042 620 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 CLCA4Q14CN2 919 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 TYSND1Q2T9J0 566 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 TIGD7Q6NT04 549 aaPredicted RBP3.37□□□□□ -1.87
UBXN4-208ENST00000490163 TOP6BLQ8N6T0 577 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 DTX3Q8N9I9 347 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 Q8NA96 180 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 EYA3Q99504 573 aa3.37□□□□□ -1.87
UBXN4-208ENST00000490163 PAIP1Q9H074 479 aaKnown RBP3.37□□□□□ -1.87
UBXN4-208ENST00000490163 OR10A4Q9H209 315 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms