RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 PACSIN1Q9BY11 444 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 RNF26Q9BY78 433 aaPredicted RBP5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 CRNKL1Q9BZJ0 848 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 RBM38Q9H0Z9 239 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 GBA3Q9H227 469 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 TPK1Q9H3S4 243 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 CCSER2Q9H7U1 834 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 C17orf75Q9HAS0 396 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 PARVBQ9HBI1 364 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 TRPC7Q9HCX4 862 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 MLXIPLQ9NP71 852 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 UBN1Q9NPG3 1134 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 DISC1Q9NRI5 854 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 UVRAGQ9P2Y5 699 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 PCYOX1Q9UHG3 505 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 ADAMTS1Q9UHI8 967 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 AMFRQ9UKV5 643 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 CCPG1Q9ULG6 757 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 COQ6Q9Y2Z9 468 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 TRIM17Q9Y577 477 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 TIMM22Q9Y584 194 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 AK5Q9Y6K8 562 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 WASF2Q9Y6W5 498 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 NWD2Q9ULI1 1742 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 COL16A1Q07092 1604 aaPredicted RBP5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 METP08581 1390 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 SPEF2Q9C093 1822 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 PEAK1Q9H792 1746 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 FUOMA2VDF0 154 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 FAM47DPA6NHR8 397 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 A6NJY4 79 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 BTBD11A6QL63 1104 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 RASA4BC9J798 803 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 PLSCR1O15162 318 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 GPAA1O43292 621 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 RASA4O43374 803 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 DENRO43583 198 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 BUD23O43709 281 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 CYTH3O43739 400 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 PEX1O43933 1283 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 DNAJC6O75061 913 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 CIB2O75838 187 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 NOL4O94818 638 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 HAUS5O94927 633 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 RARBP10826 455 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 PTPN2P17706 415 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 CHRNA3P32297 505 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 ZNF76P36508 570 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 IL15P40933 162 aaPredicted RBP5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 RPL21P46778 160 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 BCAP31P51572 246 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 WDR4P57081 412 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 NAA20P61599 178 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 PFKPQ01813 784 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 TCIRG1Q13488 830 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 SPARCL1Q14515 664 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 RRP1BQ14684 758 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 TGFBIQ15582 683 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 ASIC2Q16515 512 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 LONRF1Q17RB8 773 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 PROSER3Q2NL68 480 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 ANKRD20A4Q4UJ75 823 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 EARS2Q5JPH6 523 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 IL23RQ5VWK5 629 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 FYB2Q5VWT5 728 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 PCNX4Q63HM2 1172 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 SNRNP48Q6IEG0 339 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 CNNM4Q6P4Q7 775 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 UGT2A3Q6UWM9 527 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 CYFIP1Q7L576 1253 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 GET4Q7L5D6 327 aaPredicted RBP5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 EPM2AIP1Q7L775 607 aaPredicted RBP5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 TBC1D10CQ8IV04 446 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 DDHD1Q8NEL9 900 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 OR6Y1Q8NGX8 325 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 RIN3Q8TB24 985 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 DENND1AQ8TEH3 1009 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 PRPF31Q8WWY3 499 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 STARD8Q92502 1023 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 EDEM1Q92611 657 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 GLG1Q92896 1179 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 ANKRD36BP1Q96IX9 119 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 C7orf25Q9BPX7 421 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 HEPHQ9BQS7 1158 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 CCDC77Q9BR77 488 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 METTL22Q9BUU2 404 aaPredicted RBP5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 MRPS26Q9BYN8 205 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 OSBPL6Q9BZF3 934 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 FHDC1Q9C0D6 1143 aaPredicted RBP5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 KLHL4Q9C0H6 718 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 CCSER1Q9C0I3 900 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 PUS7LQ9H0K6 701 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 CNNM2Q9H8M5 875 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 ATAD3AQ9NVI7 634 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 ARL8BQ9NVJ2 186 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 TAS2R1Q9NYW7 299 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 SELENONQ9NZV5 590 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 ZSWIM5Q9P217 1185 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 CDV3Q9UKY7 258 aaKnown RBP5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 ITM2BQ9Y287 266 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms