RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 MSTO1Q9BUK6 570 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 KCNH6Q9H252 994 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 RPF1Q9H9Y2 349 aaKnown RBP12.74□□□□□ -0.37
GGPS1-207ENST00000489692 KCNK12Q9HB15 430 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 BLOC1S4Q9NUP1 217 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 CNTN3Q9P232 1028 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 MTRRQ9UBK8 725 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 TBX20Q9UMR3 447 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 CTNND2Q9UQB3 1225 aa12.74□□□□□ -0.37
GGPS1-207ENST00000489692 LRRC10BA6NIK2 292 aa12.73□□□□□ -0.37
GGPS1-207ENST00000489692 H7C4K7 107 aa12.73□□□□□ -0.37
GGPS1-207ENST00000489692 ABLIM1O14639 778 aa12.73□□□□□ -0.37
GGPS1-207ENST00000489692 HNRNPA1P09651 372 aaKnown RBP eCLIP12.73□□□□□ -0.37
GGPS1-207ENST00000489692 NMT1P30419 496 aaKnown RBP12.73□□□□□ -0.37
GGPS1-207ENST00000489692 AVPR2P30518 371 aa12.73□□□□□ -0.37
GGPS1-207ENST00000489692 PBX1P40424 430 aa12.73□□□□□ -0.37
GGPS1-207ENST00000489692 PTPN5P54829 565 aa12.73□□□□□ -0.37
GGPS1-207ENST00000489692 NTHL1P78549 312 aa12.73□□□□□ -0.37
GGPS1-207ENST00000489692 RAB33AQ14088 237 aa12.73□□□□□ -0.37
GGPS1-207ENST00000489692 KYAT1Q16773 422 aa12.73□□□□□ -0.37
GGPS1-207ENST00000489692 SLC10A6Q3KNW5 377 aa12.73□□□□□ -0.37
GGPS1-207ENST00000489692 KMT5BQ4FZB7 885 aa12.73□□□□□ -0.37
GGPS1-207ENST00000489692 CTXN3Q4LDR2 81 aa12.73□□□□□ -0.37
GGPS1-207ENST00000489692 XKR4Q5GH76 650 aa12.73□□□□□ -0.37
GGPS1-207ENST00000489692 VARS2Q5ST30 1063 aaKnown RBP12.73□□□□□ -0.37
GGPS1-207ENST00000489692 KLHL10Q6JEL2 608 aa12.73□□□□□ -0.37
GGPS1-207ENST00000489692 ALKAL1Q6UXT8 129 aa12.73□□□□□ -0.37
GGPS1-207ENST00000489692 APPL2Q8NEU8 664 aa12.73□□□□□ -0.37
GGPS1-207ENST00000489692 NELFBQ8WX92 580 aa12.73□□□□□ -0.37
GGPS1-207ENST00000489692 RSAD2Q8WXG1 361 aa12.73□□□□□ -0.37
GGPS1-207ENST00000489692 DHTKD1Q96HY7 919 aaPredicted RBP12.73□□□□□ -0.37
GGPS1-207ENST00000489692 PRRX2Q99811 253 aa12.73□□□□□ -0.37
GGPS1-207ENST00000489692 LRRC27Q9C0I9 530 aa12.73□□□□□ -0.37
GGPS1-207ENST00000489692 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.73□□□□□ -0.37
GGPS1-207ENST00000489692 IGSF9Q9P2J2 1179 aa12.73□□□□□ -0.37
GGPS1-207ENST00000489692 TUBGCP4Q9UGJ1 667 aa12.73□□□□□ -0.37
GGPS1-207ENST00000489692 PSMA7O14818 248 aa12.72□□□□□ -0.37
GGPS1-207ENST00000489692 ARHGAP6O43182 974 aa12.72□□□□□ -0.37
GGPS1-207ENST00000489692 XPOTO43592 962 aaKnown RBP12.72□□□□□ -0.37
GGPS1-207ENST00000489692 N4BP1O75113 896 aaKnown RBP12.72□□□□□ -0.37
GGPS1-207ENST00000489692 LRG1P02750 347 aa12.72□□□□□ -0.37
GGPS1-207ENST00000489692 CFHP08603 1231 aa12.72□□□□□ -0.37
GGPS1-207ENST00000489692 IDEP14735 1019 aa12.72□□□□□ -0.37
GGPS1-207ENST00000489692 SCP2P22307 547 aa12.72□□□□□ -0.37
GGPS1-207ENST00000489692 ABCD1P33897 745 aa12.72□□□□□ -0.37
GGPS1-207ENST00000489692 TNFSF9P41273 254 aa12.72□□□□□ -0.37
GGPS1-207ENST00000489692 NHLH1Q02575 133 aa12.72□□□□□ -0.37
GGPS1-207ENST00000489692 E4F1Q66K89 784 aaPredicted RBP12.72□□□□□ -0.37
GGPS1-207ENST00000489692 FOXR2Q6PJQ5 311 aa12.72□□□□□ -0.37
GGPS1-207ENST00000489692 RSPO2Q6UXX9 243 aaPredicted RBP12.72□□□□□ -0.37
GGPS1-207ENST00000489692 DSTYKQ6XUX3 929 aa12.72□□□□□ -0.37
GGPS1-207ENST00000489692 SV2BQ7L1I2 683 aa12.72□□□□□ -0.37
GGPS1-207ENST00000489692 ALYREFQ86V81 257 aaKnown RBP12.72□□□□□ -0.37
GGPS1-207ENST00000489692 SIX5Q8N196 739 aa12.72□□□□□ -0.37
GGPS1-207ENST00000489692 C16orf45Q96MC5 204 aaPredicted RBP12.72□□□□□ -0.37
GGPS1-207ENST00000489692 PANX2Q96RD6 677 aa12.72□□□□□ -0.37
GGPS1-207ENST00000489692 TRIM9Q9C026 710 aa12.72□□□□□ -0.37
GGPS1-207ENST00000489692 BACE2Q9Y5Z0 518 aa12.72□□□□□ -0.37
GGPS1-207ENST00000489692 PVALEFA0A1B0GWK0 134 aa12.71□□□□□ -0.37
GGPS1-207ENST00000489692 GOLGA6L9A6NEM1 432 aa12.71□□□□□ -0.37
GGPS1-207ENST00000489692 LACTBL1A8MY62 500 aa12.71□□□□□ -0.37
GGPS1-207ENST00000489692 SYN3O14994 580 aa12.71□□□□□ -0.37
GGPS1-207ENST00000489692 OGTO15294 1046 aa12.71□□□□□ -0.37
GGPS1-207ENST00000489692 NARSO43776 548 aaKnown RBP12.71□□□□□ -0.37
GGPS1-207ENST00000489692 STX10O60499 249 aa12.71□□□□□ -0.37
GGPS1-207ENST00000489692 LAMP2P13473 410 aa12.71□□□□□ -0.37
GGPS1-207ENST00000489692 CPB1P15086 417 aa12.71□□□□□ -0.37
GGPS1-207ENST00000489692 EEF1GP26641 437 aaKnown RBP12.71□□□□□ -0.37
GGPS1-207ENST00000489692 PRCPP42785 496 aa12.71□□□□□ -0.37
GGPS1-207ENST00000489692 STX17P56962 302 aa12.71□□□□□ -0.37
GGPS1-207ENST00000489692 TRIM14Q14142 442 aa12.71□□□□□ -0.37
GGPS1-207ENST00000489692 ZC2HC1CQ53FD0 456 aaPredicted RBP12.71□□□□□ -0.37
GGPS1-207ENST00000489692 CEP135Q66GS9 1140 aa12.71□□□□□ -0.37
GGPS1-207ENST00000489692 ZNF280DQ6N043 979 aa12.71□□□□□ -0.37
GGPS1-207ENST00000489692 CD300LGQ6UXG3 332 aa12.71□□□□□ -0.37
GGPS1-207ENST00000489692 USP37Q86T82 979 aa12.71□□□□□ -0.37
GGPS1-207ENST00000489692 SFR1Q86XK3 245 aa12.71□□□□□ -0.37
GGPS1-207ENST00000489692 TMEM139Q8IV31 216 aa12.71□□□□□ -0.37
GGPS1-207ENST00000489692 SMYD4Q8IYR2 804 aaPredicted RBP12.71□□□□□ -0.37
GGPS1-207ENST00000489692 PRSS33Q8NF86 280 aa12.71□□□□□ -0.37
GGPS1-207ENST00000489692 BEST2Q8NFU1 509 aa12.71□□□□□ -0.37
GGPS1-207ENST00000489692 LRRC15Q8TF66 581 aa12.71□□□□□ -0.37
GGPS1-207ENST00000489692 RHOBTB2Q9BYZ6 727 aa12.71□□□□□ -0.37
GGPS1-207ENST00000489692 THAP9Q9H5L6 903 aa12.71□□□□□ -0.37
GGPS1-207ENST00000489692 MRPL44Q9H9J2 332 aaKnown RBP12.71□□□□□ -0.37
GGPS1-207ENST00000489692 PLEKHA5Q9HAU0 1116 aa12.71□□□□□ -0.37
GGPS1-207ENST00000489692 CYP4F11Q9HBI6 524 aa12.71□□□□□ -0.37
GGPS1-207ENST00000489692 EXOC1Q9NV70 894 aa12.71□□□□□ -0.37
GGPS1-207ENST00000489692 TBC1D7Q9P0N9 293 aa12.71□□□□□ -0.37
GGPS1-207ENST00000489692 EPS15L1Q9UBC2 864 aa12.71□□□□□ -0.37
GGPS1-207ENST00000489692 UBQLN1Q9UMX0 589 aaKnown RBP12.71□□□□□ -0.37
GGPS1-207ENST00000489692 DUSP12Q9UNI6 340 aa12.71□□□□□ -0.37
GGPS1-207ENST00000489692 BICDL2A1A5D9 508 aa12.7□□□□□ -0.38
GGPS1-207ENST00000489692 USP27XA6NNY8 438 aa12.7□□□□□ -0.38
GGPS1-207ENST00000489692 ZSCAN12O43309 604 aa12.7□□□□□ -0.38
GGPS1-207ENST00000489692 FECHP22830 423 aa12.7□□□□□ -0.38
GGPS1-207ENST00000489692 HOXA9P31269 272 aa12.7□□□□□ -0.38
GGPS1-207ENST00000489692 GUCY2FP51841 1108 aa12.7□□□□□ -0.38
GGPS1-207ENST00000489692 ZNF131P52739 623 aa12.7□□□□□ -0.38
GGPS1-207ENST00000489692 COPB1P53618 953 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms