RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 ANXA1P04083 346 aa4.14□□□□□ -1.75
CPSF3-205ENST00000489629 CDK4P11802 303 aa4.14□□□□□ -1.75
CPSF3-205ENST00000489629 PPP3CBP16298 524 aa4.14□□□□□ -1.75
CPSF3-205ENST00000489629 CDKN1CP49918 316 aaPredicted RBP4.14□□□□□ -1.75
CPSF3-205ENST00000489629 GUCY2FP51841 1108 aa4.14□□□□□ -1.75
CPSF3-205ENST00000489629 KIF23Q02241 960 aaPredicted RBP4.14□□□□□ -1.75
CPSF3-205ENST00000489629 SNAPC2Q13487 334 aa4.14□□□□□ -1.75
CPSF3-205ENST00000489629 HLXQ14774 488 aaPredicted RBP4.14□□□□□ -1.75
CPSF3-205ENST00000489629 TXNRD1Q16881 649 aa4.14□□□□□ -1.75
CPSF3-205ENST00000489629 AKNAD1Q5T1N1 836 aa4.14□□□□□ -1.75
CPSF3-205ENST00000489629 KAZNQ674X7 775 aa4.14□□□□□ -1.75
CPSF3-205ENST00000489629 PPP4R3AQ6IN85 833 aa4.14□□□□□ -1.75
CPSF3-205ENST00000489629 ZNF788Q6ZQV5 615 aa4.14□□□□□ -1.75
CPSF3-205ENST00000489629 GADL1Q6ZQY3 521 aa4.14□□□□□ -1.75
CPSF3-205ENST00000489629 MICALCLQ6ZW33 695 aa4.14□□□□□ -1.75
CPSF3-205ENST00000489629 GRASPQ7Z6J2 395 aaPredicted RBP4.14□□□□□ -1.75
CPSF3-205ENST00000489629 SLC17A8Q8NDX2 589 aa4.14□□□□□ -1.75
CPSF3-205ENST00000489629 MYCBPAPQ8TBZ2 947 aa4.14□□□□□ -1.75
CPSF3-205ENST00000489629 SARAFQ96BY9 339 aa4.14□□□□□ -1.75
CPSF3-205ENST00000489629 FBXL20Q96IG2 436 aa4.14□□□□□ -1.75
CPSF3-205ENST00000489629 IMPG2Q9BZV3 1241 aa4.14□□□□□ -1.75
CPSF3-205ENST00000489629 CFAP20Q9Y6A4 193 aaKnown RBP4.14□□□□□ -1.75
CPSF3-205ENST00000489629 PRSS29PA6NIE9 313 aa4.13□□□□□ -1.75
CPSF3-205ENST00000489629 VWC2LB2RUY7 222 aa4.13□□□□□ -1.75
CPSF3-205ENST00000489629 F2RL2O00254 374 aa4.13□□□□□ -1.75
CPSF3-205ENST00000489629 CDK11BP21127 795 aaKnown RBP4.13□□□□□ -1.75
CPSF3-205ENST00000489629 MALP21145 153 aa4.13□□□□□ -1.75
CPSF3-205ENST00000489629 FXR1P51114 621 aaKnown RBP eCLIP4.13□□□□□ -1.75
CPSF3-205ENST00000489629 ADKP55263 362 aaKnown RBP4.13□□□□□ -1.75
CPSF3-205ENST00000489629 PIGFQ07326 219 aa4.13□□□□□ -1.75
CPSF3-205ENST00000489629 ODF1Q14990 250 aa4.13□□□□□ -1.75
CPSF3-205ENST00000489629 KHDC1Q4VXA5 237 aaKnown RBP4.13□□□□□ -1.75
CPSF3-205ENST00000489629 TAPT1Q6NXT6 567 aa4.13□□□□□ -1.75
CPSF3-205ENST00000489629 PDSS2Q86YH6 399 aa4.13□□□□□ -1.75
CPSF3-205ENST00000489629 TOR1AIP2Q8NFQ8 470 aa4.13□□□□□ -1.75
CPSF3-205ENST00000489629 SNX19Q92543 992 aa4.13□□□□□ -1.75
CPSF3-205ENST00000489629 TRIB1Q96RU8 372 aa4.13□□□□□ -1.75
CPSF3-205ENST00000489629 SIDT1Q9NXL6 827 aaKnown RBP4.13□□□□□ -1.75
CPSF3-205ENST00000489629 ETAA1Q9NY74 926 aa4.13□□□□□ -1.75
CPSF3-205ENST00000489629 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.13□□□□□ -1.75
CPSF3-205ENST00000489629 SBNO2Q9Y2G9 1366 aa4.13□□□□□ -1.75
CPSF3-205ENST00000489629 ORC4O43929 436 aa4.12□□□□□ -1.75
CPSF3-205ENST00000489629 KATNA1O75449 491 aa4.12□□□□□ -1.75
CPSF3-205ENST00000489629 CHRM2P08172 466 aa4.12□□□□□ -1.75
CPSF3-205ENST00000489629 NXPH1P58417 271 aa4.12□□□□□ -1.75
CPSF3-205ENST00000489629 AMPD3Q01432 767 aa4.12□□□□□ -1.75
CPSF3-205ENST00000489629 ITKQ08881 620 aa4.12□□□□□ -1.75
CPSF3-205ENST00000489629 CCDC93Q567U6 631 aa4.12□□□□□ -1.75
CPSF3-205ENST00000489629 SLC4A10Q6U841 1118 aa4.12□□□□□ -1.75
CPSF3-205ENST00000489629 TTC7BQ86TV6 843 aa4.12□□□□□ -1.75
CPSF3-205ENST00000489629 SCAMP4Q969E2 229 aa4.12□□□□□ -1.75
CPSF3-205ENST00000489629 VRK1Q99986 396 aaPredicted RBP4.12□□□□□ -1.75
CPSF3-205ENST00000489629 SLC13A1Q9BZW2 595 aa4.12□□□□□ -1.75
CPSF3-205ENST00000489629 CPNE5Q9HCH3 593 aa4.12□□□□□ -1.75
CPSF3-205ENST00000489629 KMT5AQ9NQR1 393 aa4.12□□□□□ -1.75
CPSF3-205ENST00000489629 KLC4Q9NSK0 619 aa4.12□□□□□ -1.75
CPSF3-205ENST00000489629 ADAM21Q9UKJ8 722 aa4.12□□□□□ -1.75
CPSF3-205ENST00000489629 MRFAP1Q9Y605 127 aa4.12□□□□□ -1.75
CPSF3-205ENST00000489629 TNKSO95271 1327 aa4.12□□□□□ -1.75
CPSF3-205ENST00000489629 AOX1Q06278 1338 aa4.12□□□□□ -1.75
CPSF3-205ENST00000489629 SPATA31A3Q5VYP0 1347 aa4.12□□□□□ -1.75
CPSF3-205ENST00000489629 ADGRA2Q96PE1 1338 aa4.12□□□□□ -1.75
CPSF3-205ENST00000489629 DNAJC9-AS1A6NH13 148 aa4.11□□□□□ -1.75
CPSF3-205ENST00000489629 LINC00473A8K010 186 aa4.11□□□□□ -1.75
CPSF3-205ENST00000489629 TOR1BO14657 336 aa4.11□□□□□ -1.75
CPSF3-205ENST00000489629 ZRANB2O95218 330 aaKnown RBP eCLIP4.11□□□□□ -1.75
CPSF3-205ENST00000489629 GPD1P21695 349 aa4.11□□□□□ -1.75
CPSF3-205ENST00000489629 CYP2C19P33261 490 aa4.11□□□□□ -1.75
CPSF3-205ENST00000489629 NPTX2P47972 431 aa4.11□□□□□ -1.75
CPSF3-205ENST00000489629 SOX10P56693 466 aa4.11□□□□□ -1.75
CPSF3-205ENST00000489629 ITIH3Q06033 890 aa4.11□□□□□ -1.75
CPSF3-205ENST00000489629 TCF15Q12870 199 aa4.11□□□□□ -1.75
CPSF3-205ENST00000489629 PREPLQ4J6C6 727 aaPredicted RBP4.11□□□□□ -1.75
CPSF3-205ENST00000489629 TSTD2Q5T7W7 516 aa4.11□□□□□ -1.75
CPSF3-205ENST00000489629 PAPD7Q5XG87 772 aaKnown RBP4.11□□□□□ -1.75
CPSF3-205ENST00000489629 FAM9AQ8IZU1 332 aaPredicted RBP4.11□□□□□ -1.75
CPSF3-205ENST00000489629 AOPEPQ8N6M6 819 aa4.11□□□□□ -1.75
CPSF3-205ENST00000489629 FBXO41Q8TF61 875 aa4.11□□□□□ -1.75
CPSF3-205ENST00000489629 DPF1Q92782 380 aa4.11□□□□□ -1.75
CPSF3-205ENST00000489629 MTMR8Q96EF0 704 aa4.11□□□□□ -1.75
CPSF3-205ENST00000489629 OSBPL9Q96SU4 736 aa4.11□□□□□ -1.75
CPSF3-205ENST00000489629 SMOQ99835 787 aa4.11□□□□□ -1.75
CPSF3-205ENST00000489629 AMBRA1Q9C0C7 1298 aa4.11□□□□□ -1.75
CPSF3-205ENST00000489629 GPR35Q9HC97 309 aa4.11□□□□□ -1.75
CPSF3-205ENST00000489629 MRPS18AQ9NVS2 196 aaKnown RBP4.11□□□□□ -1.75
CPSF3-205ENST00000489629 RLIMQ9NVW2 624 aa4.11□□□□□ -1.75
CPSF3-205ENST00000489629 AGAP1Q9UPQ3 857 aa4.11□□□□□ -1.75
CPSF3-205ENST00000489629 CADPSQ9ULU8 1353 aa4.11□□□□□ -1.75
CPSF3-205ENST00000489629 KAT6AQ92794 2004 aa4.11□□□□□ -1.75
CPSF3-205ENST00000489629 RPLP2P05387 115 aaKnown RBP4.1□□□□□ -1.75
CPSF3-205ENST00000489629 PRDX5P30044 214 aa4.1□□□□□ -1.75
CPSF3-205ENST00000489629 TOB1P50616 345 aaPredicted RBP4.1□□□□□ -1.75
CPSF3-205ENST00000489629 EVA1CP58658 441 aa4.1□□□□□ -1.75
CPSF3-205ENST00000489629 HABP2Q14520 560 aaPredicted RBP4.1□□□□□ -1.75
CPSF3-205ENST00000489629 UAP1L1Q3KQV9 507 aa4.1□□□□□ -1.75
CPSF3-205ENST00000489629 EFCAB2Q5VUJ9 269 aa4.1□□□□□ -1.75
CPSF3-205ENST00000489629 SLC30A10Q6XR72 485 aa4.1□□□□□ -1.75
CPSF3-205ENST00000489629 PTF1AQ7RTS3 328 aa4.1□□□□□ -1.75
CPSF3-205ENST00000489629 GLCCI1Q86VQ1 547 aa4.1□□□□□ -1.75
CPSF3-205ENST00000489629 FAM90A1Q86YD7 464 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms