RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 ZMYND12Q9H0C1 365 aa16.59■□□□□ 0.25
UFD1-209ENST00000489406 WRAP73Q9P2S5 460 aaPredicted RBP16.59■□□□□ 0.25
UFD1-209ENST00000489406 PPME1Q9Y570 386 aa16.59■□□□□ 0.25
UFD1-209ENST00000489406 TEX15Q9BXT5 2789 aa16.59■□□□□ 0.25
UFD1-209ENST00000489406 SERPINF2P08697 491 aa16.58■□□□□ 0.24
UFD1-209ENST00000489406 DPP6P42658 865 aa16.58■□□□□ 0.24
UFD1-209ENST00000489406 RNF19BQ6ZMZ0 732 aa16.58■□□□□ 0.24
UFD1-209ENST00000489406 GAREM2Q75VX8 874 aa16.58■□□□□ 0.24
UFD1-209ENST00000489406 OLIG1Q8TAK6 271 aa16.58■□□□□ 0.24
UFD1-209ENST00000489406 ASAP3Q8TDY4 903 aa16.58■□□□□ 0.24
UFD1-209ENST00000489406 DNAJC25Q9H1X3 360 aa16.58■□□□□ 0.24
UFD1-209ENST00000489406 CAPN10Q9HC96 672 aa16.58■□□□□ 0.24
UFD1-209ENST00000489406 DNAAF2Q9NVR5 837 aaKnown RBP16.58■□□□□ 0.24
UFD1-209ENST00000489406 RBM28Q9NW13 759 aaKnown RBP16.58■□□□□ 0.24
UFD1-209ENST00000489406 NUP210Q8TEM1 1887 aaPredicted RBP16.58■□□□□ 0.24
UFD1-209ENST00000489406 EML1O00423 815 aa16.57■□□□□ 0.24
UFD1-209ENST00000489406 ARHGAP33O14559 1287 aa16.57■□□□□ 0.24
UFD1-209ENST00000489406 CPB1P15086 417 aa16.57■□□□□ 0.24
UFD1-209ENST00000489406 ARSAP15289 507 aa16.57■□□□□ 0.24
UFD1-209ENST00000489406 P2RY2P41231 377 aa16.57■□□□□ 0.24
UFD1-209ENST00000489406 POU5F1BQ06416 359 aa16.57■□□□□ 0.24
UFD1-209ENST00000489406 MRPL58Q14197 206 aaKnown RBP16.57■□□□□ 0.24
UFD1-209ENST00000489406 ARHGAP15Q53QZ3 475 aa16.57■□□□□ 0.24
UFD1-209ENST00000489406 XKR9Q5GH70 373 aa16.57■□□□□ 0.24
UFD1-209ENST00000489406 PEAR1Q5VY43 1037 aaPredicted RBP16.57■□□□□ 0.24
UFD1-209ENST00000489406 PCSK4Q6UW60 755 aa16.57■□□□□ 0.24
UFD1-209ENST00000489406 SYNE3Q6ZMZ3 975 aa16.57■□□□□ 0.24
UFD1-209ENST00000489406 NOSTRINQ8IVI9 506 aa16.57■□□□□ 0.24
UFD1-209ENST00000489406 FAM181AQ8N9Y4 354 aa16.57■□□□□ 0.24
UFD1-209ENST00000489406 CEP76Q8TAP6 659 aa16.57■□□□□ 0.24
UFD1-209ENST00000489406 XPNPEP1Q9NQW7 623 aa16.57■□□□□ 0.24
UFD1-209ENST00000489406 GDAQ9Y2T3 454 aa16.57■□□□□ 0.24
UFD1-209ENST00000489406 ESYT2A0FGR8 921 aa16.56■□□□□ 0.24
UFD1-209ENST00000489406 GABRR2P28476 465 aa16.56■□□□□ 0.24
UFD1-209ENST00000489406 EPHB3P54753 998 aa16.56■□□□□ 0.24
UFD1-209ENST00000489406 SLC14A1Q13336 389 aa16.56■□□□□ 0.24
UFD1-209ENST00000489406 RTN1Q16799 776 aa16.56■□□□□ 0.24
UFD1-209ENST00000489406 SPRYD3Q8NCJ5 442 aa16.56■□□□□ 0.24
UFD1-209ENST00000489406 SPACA7Q96KW9 195 aa16.56■□□□□ 0.24
UFD1-209ENST00000489406 UROC1Q96N76 676 aa16.56■□□□□ 0.24
UFD1-209ENST00000489406 PPP1R10Q96QC0 940 aaKnown RBP16.56■□□□□ 0.24
UFD1-209ENST00000489406 OSBPL3Q9H4L5 887 aa16.56■□□□□ 0.24
UFD1-209ENST00000489406 KIAA1522Q9P206 1035 aaPredicted RBP16.56■□□□□ 0.24
UFD1-209ENST00000489406 MAFFQ9ULX9 164 aa16.56■□□□□ 0.24
UFD1-209ENST00000489406 PCDH15Q96QU1 1955 aa16.55■□□□□ 0.24
UFD1-209ENST00000489406 PTPRQQ9UMZ3 2332 aa16.55■□□□□ 0.24
UFD1-209ENST00000489406 SYN3O14994 580 aa16.55■□□□□ 0.24
UFD1-209ENST00000489406 ZBTB39O15060 712 aa16.55■□□□□ 0.24
UFD1-209ENST00000489406 DKC1O60832 514 aaKnown RBP eCLIP16.55■□□□□ 0.24
UFD1-209ENST00000489406 WISP1O95388 367 aa16.55■□□□□ 0.24
UFD1-209ENST00000489406 YWHABP31946 246 aaKnown RBP16.55■□□□□ 0.24
UFD1-209ENST00000489406 GJA4P35212 333 aa16.55■□□□□ 0.24
UFD1-209ENST00000489406 HOXD12P35452 270 aa16.55■□□□□ 0.24
UFD1-209ENST00000489406 USP11P51784 963 aa16.55■□□□□ 0.24
UFD1-209ENST00000489406 CYP4F8P98187 520 aa16.55■□□□□ 0.24
UFD1-209ENST00000489406 CAMK2BQ13554 666 aa16.55■□□□□ 0.24
UFD1-209ENST00000489406 NBR1Q14596 966 aa16.55■□□□□ 0.24
UFD1-209ENST00000489406 PFKFB3Q16875 520 aaPredicted RBP16.55■□□□□ 0.24
UFD1-209ENST00000489406 Q4G0T1 1027 aa16.55■□□□□ 0.24
UFD1-209ENST00000489406 C2orf27AQ580R0 203 aa16.55■□□□□ 0.24
UFD1-209ENST00000489406 DEFB119Q8N690 84 aa16.55■□□□□ 0.24
UFD1-209ENST00000489406 CD101Q93033 1021 aa16.55■□□□□ 0.24
UFD1-209ENST00000489406 EXOC4Q96A65 974 aa16.55■□□□□ 0.24
UFD1-209ENST00000489406 TASP1Q9H6P5 420 aa16.55■□□□□ 0.24
UFD1-209ENST00000489406 TBX20Q9UMR3 447 aa16.55■□□□□ 0.24
UFD1-209ENST00000489406 GOLGA4Q13439 2230 aaKnown RBP16.55■□□□□ 0.24
UFD1-209ENST00000489406 FAM149AA5PLN7 773 aa16.54■□□□□ 0.24
UFD1-209ENST00000489406 ANTXRLA6NF34 631 aa16.54■□□□□ 0.24
UFD1-209ENST00000489406 TTLL13PA6NNM8 815 aa16.54■□□□□ 0.24
UFD1-209ENST00000489406 GJB3O75712 270 aa16.54■□□□□ 0.24
UFD1-209ENST00000489406 TDP2O95551 362 aa16.54■□□□□ 0.24
UFD1-209ENST00000489406 WEE1P30291 646 aa16.54■□□□□ 0.24
UFD1-209ENST00000489406 PLD1Q13393 1074 aa16.54■□□□□ 0.24
UFD1-209ENST00000489406 LMBRD2Q68DH5 695 aaPredicted RBP16.54■□□□□ 0.24
UFD1-209ENST00000489406 ZNF280DQ6N043 979 aa16.54■□□□□ 0.24
UFD1-209ENST00000489406 OTUD6AQ7L8S5 288 aa16.54■□□□□ 0.24
UFD1-209ENST00000489406 DNAJB7Q7Z6W7 309 aaPredicted RBP16.54■□□□□ 0.24
UFD1-209ENST00000489406 GLRX5Q86SX6 157 aa16.54■□□□□ 0.24
UFD1-209ENST00000489406 SGMS1Q86VZ5 419 aa16.54■□□□□ 0.24
UFD1-209ENST00000489406 CCDC33Q8N5R6 958 aa16.54■□□□□ 0.24
UFD1-209ENST00000489406 PGLYRP2Q96PD5 576 aa16.54■□□□□ 0.24
UFD1-209ENST00000489406 NFKBIZQ9BYH8 718 aa16.54■□□□□ 0.24
UFD1-209ENST00000489406 CRISPLD1Q9H336 500 aa16.54■□□□□ 0.24
UFD1-209ENST00000489406 PDZD7Q9H5P4 517 aa16.54■□□□□ 0.24
UFD1-209ENST00000489406 ARID2Q68CP9 1835 aa16.54■□□□□ 0.24
UFD1-209ENST00000489406 TEP1Q99973 2627 aaKnown RBP16.53■□□□□ 0.24
UFD1-209ENST00000489406 MYO16Q9Y6X6 1858 aa16.53■□□□□ 0.24
UFD1-209ENST00000489406 TEX51A0A1B0GUA7 166 aa16.53■□□□□ 0.24
UFD1-209ENST00000489406 VNN2O95498 520 aa16.53■□□□□ 0.24
UFD1-209ENST00000489406 NTRK1P04629 796 aa16.53■□□□□ 0.24
UFD1-209ENST00000489406 P4HBP07237 508 aaKnown RBP16.53■□□□□ 0.24
UFD1-209ENST00000489406 SYPP08247 313 aa16.53■□□□□ 0.24
UFD1-209ENST00000489406 GLRA2P23416 452 aa16.53■□□□□ 0.24
UFD1-209ENST00000489406 GNA11P29992 359 aa16.53■□□□□ 0.24
UFD1-209ENST00000489406 ALDH1A3P47895 512 aa16.53■□□□□ 0.24
UFD1-209ENST00000489406 SEC13P55735 322 aa16.53■□□□□ 0.24
UFD1-209ENST00000489406 CYP4A11Q02928 519 aa16.53■□□□□ 0.24
UFD1-209ENST00000489406 DUSP4Q13115 394 aa16.53■□□□□ 0.24
UFD1-209ENST00000489406 TMEM132AQ24JP5 1023 aa16.53■□□□□ 0.24
UFD1-209ENST00000489406 SPDYCQ5MJ68 293 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms