RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 STXBP5Q5T5C0 1151 aa10.14□□□□□ -0.79
SSBP1-212ENST00000489378 IQCEQ6IPM2 695 aa10.14□□□□□ -0.79
SSBP1-212ENST00000489378 FSTL4Q6MZW2 842 aa10.14□□□□□ -0.79
SSBP1-212ENST00000489378 EXOC8Q8IYI6 725 aa10.14□□□□□ -0.79
SSBP1-212ENST00000489378 C3orf58Q8NDZ4 430 aa10.14□□□□□ -0.79
SSBP1-212ENST00000489378 E2F7Q96AV8 911 aa10.14□□□□□ -0.79
SSBP1-212ENST00000489378 TCEANC2Q96MN5 208 aa10.14□□□□□ -0.79
SSBP1-212ENST00000489378 PPME1Q9Y570 386 aa10.14□□□□□ -0.79
SSBP1-212ENST00000489378 PI4KAP42356 2102 aa10.14□□□□□ -0.79
SSBP1-212ENST00000489378 KALRNO60229 2985 aa10.13□□□□□ -0.79
SSBP1-212ENST00000489378 URB1O60287 2271 aaKnown RBP10.13□□□□□ -0.79
SSBP1-212ENST00000489378 TRIP11Q15643 1979 aa10.13□□□□□ -0.79
SSBP1-212ENST00000489378 TBX3O15119 743 aa10.13□□□□□ -0.79
SSBP1-212ENST00000489378 RECQL4O94761 1208 aa10.13□□□□□ -0.79
SSBP1-212ENST00000489378 CD46P15529 392 aa10.13□□□□□ -0.79
SSBP1-212ENST00000489378 YWHABP31946 246 aaKnown RBP10.13□□□□□ -0.79
SSBP1-212ENST00000489378 GBP1P32455 592 aa10.13□□□□□ -0.79
SSBP1-212ENST00000489378 ADD1P35611 737 aaKnown RBP10.13□□□□□ -0.79
SSBP1-212ENST00000489378 CLCNKBP51801 687 aa10.13□□□□□ -0.79
SSBP1-212ENST00000489378 FAM193AP78312 1265 aa10.13□□□□□ -0.79
SSBP1-212ENST00000489378 TWF1Q12792 350 aa10.13□□□□□ -0.79
SSBP1-212ENST00000489378 TFDP1Q14186 410 aa10.13□□□□□ -0.79
SSBP1-212ENST00000489378 MXD4Q14582 209 aaPredicted RBP10.13□□□□□ -0.79
SSBP1-212ENST00000489378 TTC22Q5TAA0 569 aa10.13□□□□□ -0.79
SSBP1-212ENST00000489378 ARID3BQ8IVW6 561 aaPredicted RBP10.13□□□□□ -0.79
SSBP1-212ENST00000489378 ELMOD1Q8N336 334 aa10.13□□□□□ -0.79
SSBP1-212ENST00000489378 CAMKK1Q8N5S9 505 aa10.13□□□□□ -0.79
SSBP1-212ENST00000489378 GLIS3Q8NEA6 775 aa10.13□□□□□ -0.79
SSBP1-212ENST00000489378 TBCKQ8TEA7 893 aa10.13□□□□□ -0.79
SSBP1-212ENST00000489378 CCDC12Q8WUD4 166 aaPredicted RBP10.13□□□□□ -0.79
SSBP1-212ENST00000489378 LRIG1Q96JA1 1093 aa10.13□□□□□ -0.79
SSBP1-212ENST00000489378 ZNF512Q96ME7 567 aaPredicted RBP10.13□□□□□ -0.79
SSBP1-212ENST00000489378 TMEM209Q96SK2 561 aa10.13□□□□□ -0.79
SSBP1-212ENST00000489378 SLC32A1Q9H598 525 aa10.13□□□□□ -0.79
SSBP1-212ENST00000489378 ASAH2Q9NR71 780 aa10.13□□□□□ -0.79
SSBP1-212ENST00000489378 ZNF462Q96JM2 2506 aa10.12□□□□□ -0.79
SSBP1-212ENST00000489378 MYO18BQ8IUG5 2567 aa10.12□□□□□ -0.79
SSBP1-212ENST00000489378 CYP3A7-CYP3A51PA0A087WV96 503 aa10.12□□□□□ -0.79
SSBP1-212ENST00000489378 A0A1W2PRU2 124 aa10.12□□□□□ -0.79
SSBP1-212ENST00000489378 ATG13O75143 517 aa10.12□□□□□ -0.79
SSBP1-212ENST00000489378 PRB1P04280 392 aa10.12□□□□□ -0.79
SSBP1-212ENST00000489378 CYP3A7P24462 503 aa10.12□□□□□ -0.79
SSBP1-212ENST00000489378 MAPK8P45983 427 aa10.12□□□□□ -0.79
SSBP1-212ENST00000489378 POU5F1BQ06416 359 aa10.12□□□□□ -0.79
SSBP1-212ENST00000489378 KARSQ15046 597 aaKnown RBP10.12□□□□□ -0.79
SSBP1-212ENST00000489378 ARHGAP29Q52LW3 1261 aa10.12□□□□□ -0.79
SSBP1-212ENST00000489378 XKR9Q5GH70 373 aa10.12□□□□□ -0.79
SSBP1-212ENST00000489378 TMEM196Q5HYL7 178 aa10.12□□□□□ -0.79
SSBP1-212ENST00000489378 GLRA4Q5JXX5 417 aa10.12□□□□□ -0.79
SSBP1-212ENST00000489378 PMS2CLQ68D20 193 aa10.12□□□□□ -0.79
SSBP1-212ENST00000489378 PIP4P1Q86T03 277 aa10.12□□□□□ -0.79
SSBP1-212ENST00000489378 LEMD2Q8NC56 503 aa10.12□□□□□ -0.79
SSBP1-212ENST00000489378 CHFRQ96EP1 664 aa10.12□□□□□ -0.79
SSBP1-212ENST00000489378 LXNQ9BS40 222 aa10.12□□□□□ -0.79
SSBP1-212ENST00000489378 LRRC3Q9BY71 257 aa10.12□□□□□ -0.79
SSBP1-212ENST00000489378 GPR88Q9GZN0 384 aa10.12□□□□□ -0.79
SSBP1-212ENST00000489378 GOLGA2P5Q9HBQ8 144 aa10.12□□□□□ -0.79
SSBP1-212ENST00000489378 RGL1Q9NZL6 768 aa10.12□□□□□ -0.79
SSBP1-212ENST00000489378 VAV3Q9UKW4 847 aa10.12□□□□□ -0.79
SSBP1-212ENST00000489378 HECTD1Q9ULT8 2610 aa10.12□□□□□ -0.79
SSBP1-212ENST00000489378 UNC79Q9P2D8 2635 aa10.11□□□□□ -0.79
SSBP1-212ENST00000489378 KLF18A0A0U1RQI7 1052 aa10.11□□□□□ -0.79
SSBP1-212ENST00000489378 CCDC194A0A1B0GVG4 234 aa10.11□□□□□ -0.79
SSBP1-212ENST00000489378 EGFP01133 1207 aa10.11□□□□□ -0.79
SSBP1-212ENST00000489378 AVPP01185 164 aa10.11□□□□□ -0.79
SSBP1-212ENST00000489378 P4HBP07237 508 aaKnown RBP10.11□□□□□ -0.79
SSBP1-212ENST00000489378 GLRA2P23416 452 aa10.11□□□□□ -0.79
SSBP1-212ENST00000489378 ARL2P36404 184 aa10.11□□□□□ -0.79
SSBP1-212ENST00000489378 PPP2R5CQ13362 524 aa10.11□□□□□ -0.79
SSBP1-212ENST00000489378 UPP1Q16831 310 aa10.11□□□□□ -0.79
SSBP1-212ENST00000489378 ITPRIPL2Q3MIP1 535 aa10.11□□□□□ -0.79
SSBP1-212ENST00000489378 CREB3L3Q68CJ9 461 aa10.11□□□□□ -0.79
SSBP1-212ENST00000489378 CYP2U1Q7Z449 544 aa10.11□□□□□ -0.79
SSBP1-212ENST00000489378 HAUS6Q7Z4H7 955 aa10.11□□□□□ -0.79
SSBP1-212ENST00000489378 RAB44Q7Z6P3 723 aaPredicted RBP10.11□□□□□ -0.79
SSBP1-212ENST00000489378 TMC8Q8IU68 726 aa10.11□□□□□ -0.79
SSBP1-212ENST00000489378 NOSTRINQ8IVI9 506 aa10.11□□□□□ -0.79
SSBP1-212ENST00000489378 C4orf19Q8IY42 314 aa10.11□□□□□ -0.79
SSBP1-212ENST00000489378 BICD2Q8TD16 824 aa10.11□□□□□ -0.79
SSBP1-212ENST00000489378 PPP1R10Q96QC0 940 aaKnown RBP10.11□□□□□ -0.79
SSBP1-212ENST00000489378 NFKBIZQ9BYH8 718 aa10.11□□□□□ -0.79
SSBP1-212ENST00000489378 RWDD1Q9H446 243 aaPredicted RBP10.11□□□□□ -0.79
SSBP1-212ENST00000489378 PDZD7Q9H5P4 517 aa10.11□□□□□ -0.79
SSBP1-212ENST00000489378 FBRSL1Q9HCM7 1045 aaKnown RBP10.11□□□□□ -0.79
SSBP1-212ENST00000489378 VPS54Q9P1Q0 977 aa10.11□□□□□ -0.79
SSBP1-212ENST00000489378 FBXL5Q9UKA1 691 aa10.11□□□□□ -0.79
SSBP1-212ENST00000489378 USP20Q9Y2K6 914 aa10.11□□□□□ -0.79
SSBP1-212ENST00000489378 RAXQ9Y2V3 346 aa10.11□□□□□ -0.79
SSBP1-212ENST00000489378 CFAP46Q8IYW2 2715 aa10.11□□□□□ -0.79
SSBP1-212ENST00000489378 PLXNB3Q9ULL4 1909 aa10.11□□□□□ -0.79
SSBP1-212ENST00000489378 NUP210Q8TEM1 1887 aaPredicted RBP10.11□□□□□ -0.79
SSBP1-212ENST00000489378 H0Y626 953 aa10.1□□□□□ -0.79
SSBP1-212ENST00000489378 TRAPPC3O43617 180 aa10.1□□□□□ -0.79
SSBP1-212ENST00000489378 SLC37A4O43826 429 aa10.1□□□□□ -0.79
SSBP1-212ENST00000489378 DKC1O60832 514 aaKnown RBP eCLIP10.1□□□□□ -0.79
SSBP1-212ENST00000489378 TRIM16O95361 564 aa10.1□□□□□ -0.79
SSBP1-212ENST00000489378 PRAMEF12O95522 483 aa10.1□□□□□ -0.79
SSBP1-212ENST00000489378 APBB3O95704 486 aa10.1□□□□□ -0.79
SSBP1-212ENST00000489378 BCKDHBP21953 392 aa10.1□□□□□ -0.79
SSBP1-212ENST00000489378 EXOSC10Q01780 885 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms