RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 MICU3Q86XE3 530 aa12.71□□□□□ -0.37
HDAC6-233ENST00000489352 EXOC6Q8TAG9 804 aa12.71□□□□□ -0.37
HDAC6-233ENST00000489352 CHFRQ96EP1 664 aa12.71□□□□□ -0.37
HDAC6-233ENST00000489352 MTRQ99707 1265 aa12.71□□□□□ -0.37
HDAC6-233ENST00000489352 FBRSL1Q9HCM7 1045 aaKnown RBP12.71□□□□□ -0.37
HDAC6-233ENST00000489352 A0A1B0GUA9 196 aa12.7□□□□□ -0.38
HDAC6-233ENST00000489352 B8ZZF3 427 aa12.7□□□□□ -0.38
HDAC6-233ENST00000489352 TBX3O15119 743 aa12.7□□□□□ -0.38
HDAC6-233ENST00000489352 B4GALT5O43286 388 aa12.7□□□□□ -0.38
HDAC6-233ENST00000489352 HLA-EP13747 358 aa12.7□□□□□ -0.38
HDAC6-233ENST00000489352 MCM5P33992 734 aa12.7□□□□□ -0.38
HDAC6-233ENST00000489352 P2RY2P41231 377 aa12.7□□□□□ -0.38
HDAC6-233ENST00000489352 MBTD1Q05BQ5 628 aa12.7□□□□□ -0.38
HDAC6-233ENST00000489352 NBR1Q14596 966 aa12.7□□□□□ -0.38
HDAC6-233ENST00000489352 EMC2Q15006 297 aa12.7□□□□□ -0.38
HDAC6-233ENST00000489352 C2orf27AQ580R0 203 aa12.7□□□□□ -0.38
HDAC6-233ENST00000489352 OTUD6AQ7L8S5 288 aa12.7□□□□□ -0.38
HDAC6-233ENST00000489352 PGBD3Q8N328 593 aa12.7□□□□□ -0.38
HDAC6-233ENST00000489352 MDGA1Q8NFP4 955 aa12.7□□□□□ -0.38
HDAC6-233ENST00000489352 WHAMMQ8TF30 809 aa12.7□□□□□ -0.38
HDAC6-233ENST00000489352 CD101Q93033 1021 aa12.7□□□□□ -0.38
HDAC6-233ENST00000489352 GJA10Q969M2 543 aa12.7□□□□□ -0.38
HDAC6-233ENST00000489352 LENG9Q96B70 501 aa12.7□□□□□ -0.38
HDAC6-233ENST00000489352 TMEM87BQ96K49 555 aa12.7□□□□□ -0.38
HDAC6-233ENST00000489352 TBC1D32Q96NH3 1257 aa12.7□□□□□ -0.38
HDAC6-233ENST00000489352 GCNAQ96QF7 691 aa12.7□□□□□ -0.38
HDAC6-233ENST00000489352 FNBP1Q96RU3 617 aa12.7□□□□□ -0.38
HDAC6-233ENST00000489352 MTA3Q9BTC8 594 aa12.7□□□□□ -0.38
HDAC6-233ENST00000489352 SLKQ9H2G2 1235 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-233ENST00000489352 RBM28Q9NW13 759 aaKnown RBP12.7□□□□□ -0.38
HDAC6-233ENST00000489352 FBXL5Q9UKA1 691 aa12.7□□□□□ -0.38
HDAC6-233ENST00000489352 PLXND1Q9Y4D7 1925 aa12.7□□□□□ -0.38
HDAC6-233ENST00000489352 PCDH15Q96QU1 1955 aa12.69□□□□□ -0.38
HDAC6-233ENST00000489352 MGAQ8IWI9 3026 aa12.69□□□□□ -0.38
HDAC6-233ENST00000489352 GOLGA8CPA6NN73 597 aa12.69□□□□□ -0.38
HDAC6-233ENST00000489352 ERVH48-1M5A8F1 160 aa12.69□□□□□ -0.38
HDAC6-233ENST00000489352 SLC28A2O43868 658 aa12.69□□□□□ -0.38
HDAC6-233ENST00000489352 MARCH6O60337 910 aa12.69□□□□□ -0.38
HDAC6-233ENST00000489352 RECQL4O94761 1208 aa12.69□□□□□ -0.38
HDAC6-233ENST00000489352 GABRR2P28476 465 aa12.69□□□□□ -0.38
HDAC6-233ENST00000489352 QARSP47897 775 aaKnown RBP12.69□□□□□ -0.38
HDAC6-233ENST00000489352 POU5F1BQ06416 359 aa12.69□□□□□ -0.38
HDAC6-233ENST00000489352 BFSP1Q12934 665 aa12.69□□□□□ -0.38
HDAC6-233ENST00000489352 TRIM68Q6AZZ1 485 aa12.69□□□□□ -0.38
HDAC6-233ENST00000489352 GLRX5Q86SX6 157 aa12.69□□□□□ -0.38
HDAC6-233ENST00000489352 MARCH9Q86YJ5 346 aa12.69□□□□□ -0.38
HDAC6-233ENST00000489352 MB21D2Q8IYB1 491 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-233ENST00000489352 ZNF579Q8NAF0 562 aaKnown RBP12.69□□□□□ -0.38
HDAC6-233ENST00000489352 DAGLBQ8NCG7 672 aa12.69□□□□□ -0.38
HDAC6-233ENST00000489352 CCDC12Q8WUD4 166 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-233ENST00000489352 BAP1Q92560 729 aa12.69□□□□□ -0.38
HDAC6-233ENST00000489352 CAPN10Q9HC96 672 aa12.69□□□□□ -0.38
HDAC6-233ENST00000489352 YIPF1Q9Y548 306 aa12.69□□□□□ -0.38
HDAC6-233ENST00000489352 NUB1Q9Y5A7 615 aa12.69□□□□□ -0.38
HDAC6-233ENST00000489352 SPTAN1Q13813 2472 aaKnown RBP12.69□□□□□ -0.38
HDAC6-233ENST00000489352 CNTNAP5Q8WYK1 1306 aa12.68□□□□□ -0.38
HDAC6-233ENST00000489352 E9PAM4 449 aa12.68□□□□□ -0.38
HDAC6-233ENST00000489352 CCER2I3L3R5 266 aa12.68□□□□□ -0.38
HDAC6-233ENST00000489352 SH2B2O14492 632 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-233ENST00000489352 SYN3O14994 580 aa12.68□□□□□ -0.38
HDAC6-233ENST00000489352 PSMD10O75832 226 aa12.68□□□□□ -0.38
HDAC6-233ENST00000489352 PRAMEF12O95522 483 aa12.68□□□□□ -0.38
HDAC6-233ENST00000489352 GNA11P29992 359 aa12.68□□□□□ -0.38
HDAC6-233ENST00000489352 AVPR1AP37288 418 aa12.68□□□□□ -0.38
HDAC6-233ENST00000489352 EIF2S3P41091 472 aaKnown RBP12.68□□□□□ -0.38
HDAC6-233ENST00000489352 CSRP3P50461 194 aa12.68□□□□□ -0.38
HDAC6-233ENST00000489352 SEC13P55735 322 aa12.68□□□□□ -0.38
HDAC6-233ENST00000489352 RPL6Q02878 288 aaKnown RBP12.68□□□□□ -0.38
HDAC6-233ENST00000489352 NAB2Q15742 525 aa12.68□□□□□ -0.38
HDAC6-233ENST00000489352 AMHR2Q16671 573 aa12.68□□□□□ -0.38
HDAC6-233ENST00000489352 UPP1Q16831 310 aa12.68□□□□□ -0.38
HDAC6-233ENST00000489352 PLEKHG6Q3KR16 790 aa12.68□□□□□ -0.38
HDAC6-233ENST00000489352 XKR9Q5GH70 373 aa12.68□□□□□ -0.38
HDAC6-233ENST00000489352 PEAR1Q5VY43 1037 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-233ENST00000489352 ZNF280DQ6N043 979 aa12.68□□□□□ -0.38
HDAC6-233ENST00000489352 RNF19BQ6ZMZ0 732 aa12.68□□□□□ -0.38
HDAC6-233ENST00000489352 TMC8Q8IU68 726 aa12.68□□□□□ -0.38
HDAC6-233ENST00000489352 CPA6Q8N4T0 437 aa12.68□□□□□ -0.38
HDAC6-233ENST00000489352 FAM83CQ9BQN1 747 aa12.68□□□□□ -0.38
HDAC6-233ENST00000489352 ADPGKQ9BRR6 497 aa12.68□□□□□ -0.38
HDAC6-233ENST00000489352 PI4K2AQ9BTU6 479 aa12.68□□□□□ -0.38
HDAC6-233ENST00000489352 SMG9Q9H0W8 520 aaKnown RBP12.68□□□□□ -0.38
HDAC6-233ENST00000489352 TASP1Q9H6P5 420 aa12.68□□□□□ -0.38
HDAC6-233ENST00000489352 HPS4Q9NQG7 708 aa12.68□□□□□ -0.38
HDAC6-233ENST00000489352 GDAQ9Y2T3 454 aa12.68□□□□□ -0.38
HDAC6-233ENST00000489352 ASB3Q9Y575 518 aa12.68□□□□□ -0.38
HDAC6-233ENST00000489352 HELZP42694 1942 aaKnown RBP12.67□□□□□ -0.38
HDAC6-233ENST00000489352 FAM149AA5PLN7 773 aa12.67□□□□□ -0.38
HDAC6-233ENST00000489352 OTOL1A6NHN0 477 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-233ENST00000489352 IGFBP6P24592 240 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-233ENST00000489352 MARCKSP29966 332 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-233ENST00000489352 WEE1P30291 646 aa12.67□□□□□ -0.38
HDAC6-233ENST00000489352 GJA4P35212 333 aa12.67□□□□□ -0.38
HDAC6-233ENST00000489352 LIFRP42702 1097 aa12.67□□□□□ -0.38
HDAC6-233ENST00000489352 USP11P51784 963 aa12.67□□□□□ -0.38
HDAC6-233ENST00000489352 CXADRP78310 365 aa12.67□□□□□ -0.38
HDAC6-233ENST00000489352 TAF12Q16514 161 aa12.67□□□□□ -0.38
HDAC6-233ENST00000489352 GLRA4Q5JXX5 417 aa12.67□□□□□ -0.38
HDAC6-233ENST00000489352 PPP4R3AQ6IN85 833 aa12.67□□□□□ -0.38
HDAC6-233ENST00000489352 GAREM2Q75VX8 874 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms