RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 AFF1P51825 1210 aaKnown RBP13.71□□□□□ -0.21
TOP3A-206ENST00000489131 CYP27A1Q02318 531 aa13.71□□□□□ -0.21
TOP3A-206ENST00000489131 DSC1Q08554 894 aa13.71□□□□□ -0.21
TOP3A-206ENST00000489131 TUSC3Q13454 348 aa13.71□□□□□ -0.21
TOP3A-206ENST00000489131 TCEAL1Q15170 157 aa13.71□□□□□ -0.21
TOP3A-206ENST00000489131 UPP1Q16831 310 aa13.71□□□□□ -0.21
TOP3A-206ENST00000489131 PPP1R2P3Q6NXS1 205 aa13.71□□□□□ -0.21
TOP3A-206ENST00000489131 TMEM270Q6UE05 265 aa13.71□□□□□ -0.21
TOP3A-206ENST00000489131 GLB1LQ6UWU2 654 aa13.71□□□□□ -0.21
TOP3A-206ENST00000489131 UNC93AQ86WB7 457 aa13.71□□□□□ -0.21
TOP3A-206ENST00000489131 GLYCTKQ8IVS8 523 aa13.71□□□□□ -0.21
TOP3A-206ENST00000489131 TOP6BLQ8N6T0 577 aa13.71□□□□□ -0.21
TOP3A-206ENST00000489131 WHAMMQ8TF30 809 aa13.71□□□□□ -0.21
TOP3A-206ENST00000489131 SLC20A1Q8WUM9 679 aa13.71□□□□□ -0.21
TOP3A-206ENST00000489131 RRAGDQ9NQL2 400 aaPredicted RBP13.71□□□□□ -0.21
TOP3A-206ENST00000489131 TMEM39AQ9NV64 488 aa13.71□□□□□ -0.21
TOP3A-206ENST00000489131 NXF1Q9UBU9 619 aaKnown RBP13.71□□□□□ -0.21
TOP3A-206ENST00000489131 KIAA1257Q9ULG3 409 aa13.71□□□□□ -0.21
TOP3A-206ENST00000489131 BARX2Q9UMQ3 279 aaPredicted RBP13.71□□□□□ -0.21
TOP3A-206ENST00000489131 PCDHGC3Q9UN70 934 aa13.71□□□□□ -0.21
TOP3A-206ENST00000489131 POLIQ9UNA4 740 aa13.71□□□□□ -0.21
TOP3A-206ENST00000489131 ATP11BQ9Y2G3 1177 aa13.71□□□□□ -0.21
TOP3A-206ENST00000489131 TTC3P53804 2025 aa13.71□□□□□ -0.22
TOP3A-206ENST00000489131 SCN5AQ14524 2016 aa13.71□□□□□ -0.22
TOP3A-206ENST00000489131 MICAL3Q7RTP6 2002 aa13.71□□□□□ -0.22
TOP3A-206ENST00000489131 A0A0A6YYK5 440 aaPredicted RBP13.7□□□□□ -0.22
TOP3A-206ENST00000489131 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.7□□□□□ -0.22
TOP3A-206ENST00000489131 KPNA7A9QM74 516 aa13.7□□□□□ -0.22
TOP3A-206ENST00000489131 TMEM189-UBE2V1I3L0A0 370 aa13.7□□□□□ -0.22
TOP3A-206ENST00000489131 TULP1O00294 542 aaPredicted RBP13.7□□□□□ -0.22
TOP3A-206ENST00000489131 HOXA2O43364 376 aa13.7□□□□□ -0.22
TOP3A-206ENST00000489131 KRT86O43790 486 aa13.7□□□□□ -0.22
TOP3A-206ENST00000489131 CYP1A1P04798 512 aaPredicted RBP13.7□□□□□ -0.22
TOP3A-206ENST00000489131 PFKMP08237 780 aa13.7□□□□□ -0.22
TOP3A-206ENST00000489131 WEE2P0C1S8 567 aa13.7□□□□□ -0.22
TOP3A-206ENST00000489131 UNGP13051 313 aaPredicted RBP13.7□□□□□ -0.22
TOP3A-206ENST00000489131 TNFAIP3P21580 790 aa13.7□□□□□ -0.22
TOP3A-206ENST00000489131 CDH5P33151 784 aaPredicted RBP13.7□□□□□ -0.22
TOP3A-206ENST00000489131 CYP2C18P33260 490 aa13.7□□□□□ -0.22
TOP3A-206ENST00000489131 USP8P40818 1118 aa13.7□□□□□ -0.22
TOP3A-206ENST00000489131 MAGEA1P43355 309 aa13.7□□□□□ -0.22
TOP3A-206ENST00000489131 RAD23BP54727 409 aa13.7□□□□□ -0.22
TOP3A-206ENST00000489131 LILRA4P59901 499 aa13.7□□□□□ -0.22
TOP3A-206ENST00000489131 ETF1P62495 437 aaKnown RBP13.7□□□□□ -0.22
TOP3A-206ENST00000489131 PTPN14Q15678 1187 aa13.7□□□□□ -0.22
TOP3A-206ENST00000489131 TCTN1Q2MV58 587 aa13.7□□□□□ -0.22
TOP3A-206ENST00000489131 CLLU1OSQ5K130 101 aa13.7□□□□□ -0.22
TOP3A-206ENST00000489131 CNKSR3Q6P9H4 555 aa13.7□□□□□ -0.22
TOP3A-206ENST00000489131 RPUSD2Q8IZ73 545 aaKnown RBP13.7□□□□□ -0.22
TOP3A-206ENST00000489131 TMEM130Q8N3G9 435 aa13.7□□□□□ -0.22
TOP3A-206ENST00000489131 PCDHB18PQ96TA0 734 aa13.7□□□□□ -0.22
TOP3A-206ENST00000489131 LACRTQ9GZZ8 138 aa13.7□□□□□ -0.22
TOP3A-206ENST00000489131 SMYD3Q9H7B4 428 aa13.7□□□□□ -0.22
TOP3A-206ENST00000489131 TET1Q8NFU7 2136 aa13.69□□□□□ -0.22
TOP3A-206ENST00000489131 A0A0U1RQJ8 604 aa13.69□□□□□ -0.22
TOP3A-206ENST00000489131 SPTLC1O15269 473 aa13.69□□□□□ -0.22
TOP3A-206ENST00000489131 LSM8O95777 96 aaKnown RBP13.69□□□□□ -0.22
TOP3A-206ENST00000489131 MMEP08473 750 aa13.69□□□□□ -0.22
TOP3A-206ENST00000489131 TMEM253P0C7T8 217 aa13.69□□□□□ -0.22
TOP3A-206ENST00000489131 GNA15P30679 374 aa13.69□□□□□ -0.22
TOP3A-206ENST00000489131 KIF5AQ12840 1032 aa13.69□□□□□ -0.22
TOP3A-206ENST00000489131 SOWAHAQ2M3V2 549 aa13.69□□□□□ -0.22
TOP3A-206ENST00000489131 ARHGAP29Q52LW3 1261 aa13.69□□□□□ -0.22
TOP3A-206ENST00000489131 NOMO2Q5JPE7 1267 aa13.69□□□□□ -0.22
TOP3A-206ENST00000489131 CCDC122Q5T0U0 273 aa13.69□□□□□ -0.22
TOP3A-206ENST00000489131 KIAA1328Q86T90 577 aa13.69□□□□□ -0.22
TOP3A-206ENST00000489131 PALB2Q86YC2 1186 aa13.69□□□□□ -0.22
TOP3A-206ENST00000489131 NPAS4Q8IUM7 802 aa13.69□□□□□ -0.22
TOP3A-206ENST00000489131 RNF10Q8N5U6 811 aaKnown RBP13.69□□□□□ -0.22
TOP3A-206ENST00000489131 SLC4A11Q8NBS3 891 aa13.69□□□□□ -0.22
TOP3A-206ENST00000489131 ZNF606Q8WXB4 792 aa13.69□□□□□ -0.22
TOP3A-206ENST00000489131 ATRIPQ8WXE1 791 aa13.69□□□□□ -0.22
TOP3A-206ENST00000489131 SCLYQ96I15 445 aa13.69□□□□□ -0.22
TOP3A-206ENST00000489131 CALR3Q96L12 384 aaKnown RBP13.69□□□□□ -0.22
TOP3A-206ENST00000489131 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.69□□□□□ -0.22
TOP3A-206ENST00000489131 ZNF518BQ9C0D4 1074 aa13.69□□□□□ -0.22
TOP3A-206ENST00000489131 GOLGA2P5Q9HBQ8 144 aa13.69□□□□□ -0.22
TOP3A-206ENST00000489131 SNX9Q9Y5X1 595 aa13.69□□□□□ -0.22
TOP3A-206ENST00000489131 NCANO14594 1321 aa13.68□□□□□ -0.22
TOP3A-206ENST00000489131 ABHD14A-ACY1A0A1B0GW23 586 aa13.68□□□□□ -0.22
TOP3A-206ENST00000489131 ANKRD62A6NC57 917 aa13.68□□□□□ -0.22
TOP3A-206ENST00000489131 TRIM43BA6NCK2 446 aa13.68□□□□□ -0.22
TOP3A-206ENST00000489131 PODXLO00592 558 aa13.68□□□□□ -0.22
TOP3A-206ENST00000489131 GABRDO14764 452 aa13.68□□□□□ -0.22
TOP3A-206ENST00000489131 EFCAB14O75071 495 aa13.68□□□□□ -0.22
TOP3A-206ENST00000489131 RTN2O75298 545 aa13.68□□□□□ -0.22
TOP3A-206ENST00000489131 H2AFZP0C0S5 128 aa13.68□□□□□ -0.22
TOP3A-206ENST00000489131 WARSP23381 471 aaKnown RBP13.68□□□□□ -0.22
TOP3A-206ENST00000489131 HADHBP55084 474 aaKnown RBP13.68□□□□□ -0.22
TOP3A-206ENST00000489131 CCL23P55773 120 aa13.68□□□□□ -0.22
TOP3A-206ENST00000489131 CENPCQ03188 943 aa13.68□□□□□ -0.22
TOP3A-206ENST00000489131 STILQ15468 1287 aa13.68□□□□□ -0.22
TOP3A-206ENST00000489131 CLEC16AQ2KHT3 1053 aa13.68□□□□□ -0.22
TOP3A-206ENST00000489131 MFSD5Q6N075 450 aa13.68□□□□□ -0.22
TOP3A-206ENST00000489131 CD300LGQ6UXG3 332 aa13.68□□□□□ -0.22
TOP3A-206ENST00000489131 SCARA5Q6ZMJ2 495 aa13.68□□□□□ -0.22
TOP3A-206ENST00000489131 H2AFVQ71UI9 128 aa13.68□□□□□ -0.22
TOP3A-206ENST00000489131 GPIHBP1Q8IV16 184 aa13.68□□□□□ -0.22
TOP3A-206ENST00000489131 CRYBG2Q8N1P7 616 aa13.68□□□□□ -0.22
TOP3A-206ENST00000489131 URGCPQ8TCY9 931 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms