RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 DDHD2O94830 711 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 CYP11B1P15538 503 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 CD58P19256 250 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 IGFBP6P24592 240 aaPredicted RBP12.3□□□□□ -0.44
CMSS1-205ENST00000489081 GATMP50440 423 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 KIF11P52732 1056 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 BPIFB4P59827 614 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 LILRA4P59901 499 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 DSC1Q08554 894 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 PPIGQ13427 754 aaKnown RBP eCLIP12.3□□□□□ -0.44
CMSS1-205ENST00000489081 UPP1Q16831 310 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 TMEM270Q6UE05 265 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 LIMS2Q7Z4I7 341 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 SLC47A2Q86VL8 602 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 ZNF280BQ86YH2 543 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 C7orf61Q8IZ16 206 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 ABI1Q8IZP0 508 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 EPS8L1Q8TE68 723 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 RSPH1Q8WYR4 309 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 ABHD8Q96I13 439 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 MMS19Q96T76 1030 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 EIF3CQ99613 913 aaKnown RBP12.3□□□□□ -0.44
CMSS1-205ENST00000489081 PAAF1Q9BRP4 392 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 DESI2Q9BSY9 194 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 HTATIP2Q9BUP3 242 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 DEF6Q9H4E7 631 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 KCND1Q9NSA2 647 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 SPTLC3Q9NUV7 552 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 TBC1D13Q9NVG8 400 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 PCDH10Q9P2E7 1040 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 NOCTQ9UK39 431 aaKnown RBP12.3□□□□□ -0.44
CMSS1-205ENST00000489081 ADGRG1Q9Y653 693 aa12.3□□□□□ -0.44
CMSS1-205ENST00000489081 TRIP11Q15643 1979 aa12.29□□□□□ -0.44
CMSS1-205ENST00000489081 ESPNB1AK53 854 aa12.29□□□□□ -0.44
CMSS1-205ENST00000489081 DDX3XO00571 662 aaKnown RBP eCLIP12.29□□□□□ -0.44
CMSS1-205ENST00000489081 ZNF263O14978 683 aa12.29□□□□□ -0.44
CMSS1-205ENST00000489081 AKR1B10O60218 316 aa12.29□□□□□ -0.44
CMSS1-205ENST00000489081 CILPO75339 1184 aa12.29□□□□□ -0.44
CMSS1-205ENST00000489081 GABBR2O75899 941 aa12.29□□□□□ -0.44
CMSS1-205ENST00000489081 LCA5LO95447 670 aa12.29□□□□□ -0.44
CMSS1-205ENST00000489081 ACRP10323 421 aa12.29□□□□□ -0.44
CMSS1-205ENST00000489081 AARSP49588 968 aaKnown RBP eCLIP12.29□□□□□ -0.44
CMSS1-205ENST00000489081 PDE6CP51160 858 aa12.29□□□□□ -0.44
CMSS1-205ENST00000489081 INCA1Q0VD86 236 aa12.29□□□□□ -0.44
CMSS1-205ENST00000489081 BMS1Q14692 1282 aaKnown RBP12.29□□□□□ -0.44
CMSS1-205ENST00000489081 SOWAHAQ2M3V2 549 aa12.29□□□□□ -0.44
CMSS1-205ENST00000489081 COL13A1Q5TAT6 717 aaPredicted RBP12.29□□□□□ -0.44
CMSS1-205ENST00000489081 CD300LGQ6UXG3 332 aa12.29□□□□□ -0.44
CMSS1-205ENST00000489081 NOP9Q86U38 636 aaKnown RBP12.29□□□□□ -0.44
CMSS1-205ENST00000489081 COLGALT2Q8IYK4 626 aa12.29□□□□□ -0.44
CMSS1-205ENST00000489081 C17orf53Q8N3J3 647 aaPredicted RBP12.29□□□□□ -0.44
CMSS1-205ENST00000489081 TTC39CQ8N584 583 aa12.29□□□□□ -0.44
CMSS1-205ENST00000489081 C3orf58Q8NDZ4 430 aa12.29□□□□□ -0.44
CMSS1-205ENST00000489081 ACRBPQ8NEB7 543 aa12.29□□□□□ -0.44
CMSS1-205ENST00000489081 LNX1Q8TBB1 728 aaPredicted RBP12.29□□□□□ -0.44
CMSS1-205ENST00000489081 WHAMMQ8TF30 809 aa12.29□□□□□ -0.44
CMSS1-205ENST00000489081 SLC20A1Q8WUM9 679 aa12.29□□□□□ -0.44
CMSS1-205ENST00000489081 DDX1Q92499 740 aaKnown RBP12.29□□□□□ -0.44
CMSS1-205ENST00000489081 RABGGTAQ92696 567 aa12.29□□□□□ -0.44
CMSS1-205ENST00000489081 BADQ92934 168 aa12.29□□□□□ -0.44
CMSS1-205ENST00000489081 AGPAT1Q99943 283 aa12.29□□□□□ -0.44
CMSS1-205ENST00000489081 MRPL45Q9BRJ2 306 aaKnown RBP12.29□□□□□ -0.44
CMSS1-205ENST00000489081 ACP6Q9NPH0 428 aa12.29□□□□□ -0.44
CMSS1-205ENST00000489081 ADAMTS1Q9UHI8 967 aa12.29□□□□□ -0.44
CMSS1-205ENST00000489081 BARX2Q9UMQ3 279 aaPredicted RBP12.29□□□□□ -0.44
CMSS1-205ENST00000489081 PPP2R2CQ9Y2T4 447 aa12.29□□□□□ -0.44
CMSS1-205ENST00000489081 REXO2Q9Y3B8 237 aaKnown RBP12.29□□□□□ -0.44
CMSS1-205ENST00000489081 A0A087X0T9 212 aa12.28□□□□□ -0.44
CMSS1-205ENST00000489081 TACC1O75410 805 aa12.28□□□□□ -0.44
CMSS1-205ENST00000489081 DGKIO75912 1065 aa12.28□□□□□ -0.44
CMSS1-205ENST00000489081 B3GAT3O94766 335 aa12.28□□□□□ -0.44
CMSS1-205ENST00000489081 BAIAP3O94812 1187 aa12.28□□□□□ -0.44
CMSS1-205ENST00000489081 CALCAP01258 141 aa12.28□□□□□ -0.44
CMSS1-205ENST00000489081 AMHP03971 560 aa12.28□□□□□ -0.44
CMSS1-205ENST00000489081 FAM163BP0C2L3 166 aa12.28□□□□□ -0.44
CMSS1-205ENST00000489081 FAM228BP0C875 321 aa12.28□□□□□ -0.44
CMSS1-205ENST00000489081 CHRNB2P17787 502 aa12.28□□□□□ -0.44
CMSS1-205ENST00000489081 PAX3P23760 479 aa12.28□□□□□ -0.44
CMSS1-205ENST00000489081 MSNP26038 577 aaKnown RBP12.28□□□□□ -0.44
CMSS1-205ENST00000489081 RAD23BP54727 409 aa12.28□□□□□ -0.44
CMSS1-205ENST00000489081 WDR5P61964 334 aaKnown RBP12.28□□□□□ -0.44
CMSS1-205ENST00000489081 RNASELQ05823 741 aaKnown RBP12.28□□□□□ -0.44
CMSS1-205ENST00000489081 FPGSQ05932 587 aa12.28□□□□□ -0.44
CMSS1-205ENST00000489081 GFPT1Q06210 699 aaPredicted RBP12.28□□□□□ -0.44
CMSS1-205ENST00000489081 SLC18A3Q16572 532 aa12.28□□□□□ -0.44
CMSS1-205ENST00000489081 ZNF394Q53GI3 561 aa12.28□□□□□ -0.44
CMSS1-205ENST00000489081 DCLRE1AQ6PJP8 1040 aa12.28□□□□□ -0.44
CMSS1-205ENST00000489081 C16orf59Q7L2K0 433 aa12.28□□□□□ -0.44
CMSS1-205ENST00000489081 DPH6Q7L8W6 267 aa12.28□□□□□ -0.44
CMSS1-205ENST00000489081 VPS36Q86VN1 386 aa12.28□□□□□ -0.44
CMSS1-205ENST00000489081 ZNF677Q86XU0 584 aa12.28□□□□□ -0.44
CMSS1-205ENST00000489081 GLYCTKQ8IVS8 523 aa12.28□□□□□ -0.44
CMSS1-205ENST00000489081 CCAR2Q8N163 923 aaKnown RBP12.28□□□□□ -0.44
CMSS1-205ENST00000489081 TOP6BLQ8N6T0 577 aa12.28□□□□□ -0.44
CMSS1-205ENST00000489081 SLC30A5Q8TAD4 765 aa12.28□□□□□ -0.44
CMSS1-205ENST00000489081 TOP1MTQ969P6 601 aa12.28□□□□□ -0.44
CMSS1-205ENST00000489081 SENP8Q96LD8 212 aa12.28□□□□□ -0.44
CMSS1-205ENST00000489081 TWNKQ96RR1 684 aa12.28□□□□□ -0.44
CMSS1-205ENST00000489081 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.28□□□□□ -0.44
CMSS1-205ENST00000489081 MRPL9Q9BYD2 267 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms